RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	PDZD11	Q5EBL8	140 aa		5.25	□□□□□ -1.57
NUP85-223	ENST00000583877	C5orf38	Q86SI9	138 aa		5.25	□□□□□ -1.57
NUP85-223	ENST00000583877	GNB1L	Q9BYB4	327 aa		5.25	□□□□□ -1.57
NUP85-223	ENST00000583877		M0R143	59 aa		5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	KRTAP1-4	P0C5Y4	121 aa		5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	RPL13A	P40429	203 aa	Known RBP	5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	SPAG11B	Q08648	103 aa		5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	SMAGP	Q0VAQ4	97 aa		5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	RNASE13	Q5GAN3	156 aa	Known RBP	5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	KRTAP4-8	Q9BYQ9	185 aa		5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	OSTC	Q9NRP0	149 aa		5.24	□□□□□ -1.57
NUP85-223	ENST00000583877	SCGB1D1	O95968	90 aa		5.23	□□□□□ -1.57
NUP85-223	ENST00000583877	UBE2B	P63146	152 aa		5.23	□□□□□ -1.57
NUP85-223	ENST00000583877	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.23	□□□□□ -1.57
NUP85-223	ENST00000583877	KRTAP11-1	Q8IUC1	163 aa		5.23	□□□□□ -1.57
NUP85-223	ENST00000583877	CSDC2	Q9Y534	153 aa	Known RBP	5.23	□□□□□ -1.57
NUP85-223	ENST00000583877	TRBV27	A0A0K0K1C4	114 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	C20orf202	A1L168	122 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877		K7EN84	100 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	POLR2K	P53803	58 aa	Known RBP	5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	GAGE2E	Q4V326	116 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	TEX43	Q6ZNM6	134 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	OCC1	Q8TAD7	63 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	KRTAP4-12	Q9BQ66	201 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	PRO1933	Q9H354	126 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	MRPL35	Q9NZE8	188 aa	Known RBP	5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	GAGE2D	Q9UEU5	116 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877	MUC17	Q685J3	4493 aa		5.22	□□□□□ -1.57
NUP85-223	ENST00000583877		A0A1B0GV90	55 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	FAM168B	A1KXE4	195 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877		A8MWL6	223 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877		F8WDY8	70 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	NDUFA1	O15239	70 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	TCAP	O15273	167 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	TSPAN13	O95857	204 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	FAM231D	Q6ZW35	169 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	ORAOV1	Q8WV07	137 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	MIEN1	Q9BRT3	115 aa		5.21	□□□□□ -1.58
NUP85-223	ENST00000583877	VCY	O14598	125 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877	TLX1NB	P0CAT3	122 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877	PMCHL1	Q16048	86 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877		Q6ZUT4	128 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877	ATP5L2	Q7Z4Y8	100 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877	KIR2DL4	Q99706	377 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877	VAMP8	Q9BV40	100 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877	UBE2D4	Q9Y2X8	147 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877		V9GYV3	84 aa		5.2	□□□□□ -1.58
NUP85-223	ENST00000583877	SMIM27	A0A1W2PRY6	76 aa		5.19	□□□□□ -1.58
NUP85-223	ENST00000583877	SMKR1	H3BMG3	65 aa		5.19	□□□□□ -1.58
NUP85-223	ENST00000583877		M0QXV9	152 aa		5.19	□□□□□ -1.58
NUP85-223	ENST00000583877	LINC00614	P0C842	121 aa		5.19	□□□□□ -1.58
NUP85-223	ENST00000583877	BAGE3	Q86Y29	109 aa		5.19	□□□□□ -1.58
NUP85-223	ENST00000583877	AMN1	Q8IY45	258 aa		5.19	□□□□□ -1.58
NUP85-223	ENST00000583877		A0A1B0GUT8	65 aa		5.18	□□□□□ -1.58
NUP85-223	ENST00000583877	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.18	□□□□□ -1.58
NUP85-223	ENST00000583877	KRTAP7-1	Q8IUC3	87 aa		5.18	□□□□□ -1.58
NUP85-223	ENST00000583877	SNHG12	Q9BXW3	62 aa		5.18	□□□□□ -1.58
NUP85-223	ENST00000583877	TMEM191A	Q9H0A3	160 aa		5.18	□□□□□ -1.58
NUP85-223	ENST00000583877	NAT8B	Q9UHF3	227 aa		5.18	□□□□□ -1.58
NUP85-223	ENST00000583877	SERF1A	O75920	110 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877	PPP1R17	O96001	155 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877	COL5A1-AS1	Q5SY13	56 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877	C10orf25	Q5T742	122 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877	TMEM136	Q6ZRR5	245 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877	TIMM21	Q9BVV7	248 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877	C6orf48	Q9UBA6	75 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877	UQCR10	Q9UDW1	63 aa		5.17	□□□□□ -1.58
NUP85-223	ENST00000583877		A0A0A0MQY5	61 aa		5.16	□□□□□ -1.58
NUP85-223	ENST00000583877	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.16	□□□□□ -1.58
NUP85-223	ENST00000583877	HIGD1C	A8MV81	97 aa		5.16	□□□□□ -1.58
NUP85-223	ENST00000583877	DLEU1	O43261	78 aa		5.16	□□□□□ -1.58
NUP85-223	ENST00000583877	ZNF861P	O60384	105 aa		5.16	□□□□□ -1.58
NUP85-223	ENST00000583877	RIG	Q13278	110 aa		5.16	□□□□□ -1.58
NUP85-223	ENST00000583877	HBB	P68871	147 aa		5.15	□□□□□ -1.59
NUP85-223	ENST00000583877	NRAC	Q8N912	160 aa		5.15	□□□□□ -1.59
NUP85-223	ENST00000583877		A0A1B0GW15	77 aa		5.14	□□□□□ -1.59
NUP85-223	ENST00000583877	RPL39	P62891	51 aa	Known RBP	5.14	□□□□□ -1.59
NUP85-223	ENST00000583877	TYMSOS	Q8TAI1	123 aa		5.14	□□□□□ -1.59
NUP85-223	ENST00000583877	CHCHD1	Q96BP2	118 aa	Known RBP	5.14	□□□□□ -1.59
NUP85-223	ENST00000583877		A0A087X002	238 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	TRBV30	A0A0K0K1B3	111 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	NDUFC2-KCTD14	E9PQ53	114 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	NUPR1	O60356	82 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	HSBP1	O75506	76 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	KIAA0087	Q14695	138 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	C9orf129	Q5T035	196 aa	Known RBP	5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	PET117	Q6UWS5	81 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	FAM104A	Q969W3	186 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	SPANXA1	Q9NS26	97 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877	CBY1	Q9Y3M2	126 aa		5.13	□□□□□ -1.59
NUP85-223	ENST00000583877		A0A1B0GXF2	115 aa		5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	IGLC3	P0DOY3	106 aa		5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	CKS2	P33552	79 aa		5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	KRTDAP	P60985	99 aa		5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	MRPS36	P82909	103 aa	Known RBP	5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	MRPL51	Q4U2R6	128 aa	Known RBP	5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	SPATA45	Q537H7	98 aa		5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	C2orf82	Q6UX34	121 aa		5.12	□□□□□ -1.59
NUP85-223	ENST00000583877	C18orf32	Q8TCD1	76 aa		5.12	□□□□□ -1.59

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