RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 MT1HL1P0DM35 61 aa12.07□□□□□ -0.48
SREBF1-220ENST00000581707 SERTAD4-AS1Q5TG53 156 aa12.07□□□□□ -0.48
SREBF1-220ENST00000581707 PHF5AQ7RTV0 110 aaKnown RBP12.07□□□□□ -0.48
SREBF1-220ENST00000581707 Q8IZM0 81 aa12.07□□□□□ -0.48
SREBF1-220ENST00000581707 FAM168BA1KXE4 195 aa12.06□□□□□ -0.48
SREBF1-220ENST00000581707 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
SREBF1-220ENST00000581707 SPINK6Q6UWN8 80 aa12.06□□□□□ -0.48
SREBF1-220ENST00000581707 CST9LQ9H4G1 147 aa12.06□□□□□ -0.48
SREBF1-220ENST00000581707 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
SREBF1-220ENST00000581707 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.48
SREBF1-220ENST00000581707 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
SREBF1-220ENST00000581707 PMVKQ15126 192 aa12.04□□□□□ -0.48
SREBF1-220ENST00000581707 C18orf32Q8TCD1 76 aa12.04□□□□□ -0.48
SREBF1-220ENST00000581707 PSORS1C2Q9UIG4 136 aa12.04□□□□□ -0.48
SREBF1-220ENST00000581707 LINC00614P0C842 121 aa12.03□□□□□ -0.48
SREBF1-220ENST00000581707 FAM19A5Q7Z5A7 132 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-220ENST00000581707 URB1-AS1Q96HZ7 61 aa12.02□□□□□ -0.49
SREBF1-220ENST00000581707 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
SREBF1-220ENST00000581707 SMIM1B2RUZ4 78 aa12.01□□□□□ -0.49
SREBF1-220ENST00000581707 LINC01600Q96MT4 127 aa12.01□□□□□ -0.49
SREBF1-220ENST00000581707 A0A096LNJ9 63 aa12□□□□□ -0.49
SREBF1-220ENST00000581707 F8VRH5 84 aa12□□□□□ -0.49
SREBF1-220ENST00000581707 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
SREBF1-220ENST00000581707 C1orf137Q5JT78 98 aa12□□□□□ -0.49
SREBF1-220ENST00000581707 C9orf129Q5T035 196 aaKnown RBP12□□□□□ -0.49
SREBF1-220ENST00000581707 REG3GQ6UW15 175 aa12□□□□□ -0.49
SREBF1-220ENST00000581707 CXCL5P42830 114 aa11.99□□□□□ -0.49
SREBF1-220ENST00000581707 KRTAP7-1Q8IUC3 87 aa11.99□□□□□ -0.49
SREBF1-220ENST00000581707 RAB5BP61020 215 aa11.98□□□□□ -0.49
SREBF1-220ENST00000581707 COX7B2Q8TF08 81 aa11.98□□□□□ -0.49
SREBF1-220ENST00000581707 M0QXV9 152 aa11.97□□□□□ -0.49
SREBF1-220ENST00000581707 HBDP02042 147 aa11.97□□□□□ -0.49
SREBF1-220ENST00000581707 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
SREBF1-220ENST00000581707 NDUFA6P56556 154 aa11.97□□□□□ -0.49
SREBF1-220ENST00000581707 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
SREBF1-220ENST00000581707 YPEL4Q96NS1 127 aa11.97□□□□□ -0.49
SREBF1-220ENST00000581707 KRTAP11-1Q8IUC1 163 aa11.96□□□□□ -0.49
SREBF1-220ENST00000581707 H3BRM9 83 aa11.95□□□□□ -0.5
SREBF1-220ENST00000581707 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
SREBF1-220ENST00000581707 UBE2BP63146 152 aa11.94□□□□□ -0.5
SREBF1-220ENST00000581707 XAGE1AQ9HD64 81 aa11.94□□□□□ -0.5
SREBF1-220ENST00000581707 ATP5LO75964 103 aa11.93□□□□□ -0.5
SREBF1-220ENST00000581707 IGLV7-43P04211 117 aa11.93□□□□□ -0.5
SREBF1-220ENST00000581707 PLA2G2DQ9UNK4 145 aa11.93□□□□□ -0.5
SREBF1-220ENST00000581707 TNXBP22105 4242 aa11.91□□□□□ -0.5
SREBF1-220ENST00000581707 KRTAP10-8P60410 259 aa11.9□□□□□ -0.5
SREBF1-220ENST00000581707 BAGE3Q86Y29 109 aa11.9□□□□□ -0.5
SREBF1-220ENST00000581707 CBLN2Q8IUK8 224 aa11.9□□□□□ -0.5
SREBF1-220ENST00000581707 C22orf24Q9Y442 160 aa11.9□□□□□ -0.5
SREBF1-220ENST00000581707 ZNF22P17026 224 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-220ENST00000581707 DIRC1Q969H9 104 aa11.89□□□□□ -0.51
SREBF1-220ENST00000581707 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
SREBF1-220ENST00000581707 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
SREBF1-220ENST00000581707 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-220ENST00000581707 HMCN2Q8NDA2 5059 aa11.86□□□□□ -0.51
SREBF1-220ENST00000581707 C11orf86A6NJI1 115 aa11.85□□□□□ -0.51
SREBF1-220ENST00000581707 ODF1Q14990 250 aa11.85□□□□□ -0.51
SREBF1-220ENST00000581707 SLC7A5P1Q8MH63 180 aa11.85□□□□□ -0.51
SREBF1-220ENST00000581707 TMEM170BQ5T4T1 132 aa11.84□□□□□ -0.51
SREBF1-220ENST00000581707 TP73-AS1Q9UF72 201 aa11.84□□□□□ -0.51
SREBF1-220ENST00000581707 H0Y9J4 135 aa11.83□□□□□ -0.52
SREBF1-220ENST00000581707 MRPL55Q7Z7F7 128 aaKnown RBP11.83□□□□□ -0.52
SREBF1-220ENST00000581707 IFI27L1Q96BM0 104 aa11.83□□□□□ -0.52
SREBF1-220ENST00000581707 CHTOPQ9Y3Y2 248 aaKnown RBP11.83□□□□□ -0.52
SREBF1-220ENST00000581707 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
SREBF1-220ENST00000581707 TRGC2P03986 189 aa11.81□□□□□ -0.52
SREBF1-220ENST00000581707 NUPR1O60356 82 aa11.8□□□□□ -0.52
SREBF1-220ENST00000581707 HSBP1O75506 76 aa11.8□□□□□ -0.52
SREBF1-220ENST00000581707 PFN2P35080 140 aa11.8□□□□□ -0.52
SREBF1-220ENST00000581707 FAM19A2Q8N3H0 131 aa11.79□□□□□ -0.52
SREBF1-220ENST00000581707 LINC00167Q96N53 147 aa11.79□□□□□ -0.52
SREBF1-220ENST00000581707 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
SREBF1-220ENST00000581707 IGLV5-37A0A075B6J1 123 aa11.77□□□□□ -0.53
SREBF1-220ENST00000581707 ZNF861PO60384 105 aa11.77□□□□□ -0.53
SREBF1-220ENST00000581707 COX17Q14061 63 aa11.77□□□□□ -0.53
SREBF1-220ENST00000581707 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
SREBF1-220ENST00000581707 NKAPP1Q8N9T2 125 aa11.77□□□□□ -0.53
SREBF1-220ENST00000581707 ZNF625Q96I27 306 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-220ENST00000581707 GAGE10A6NGK3 116 aa11.76□□□□□ -0.53
SREBF1-220ENST00000581707 RPL37AP8A6NKH3 93 aa11.76□□□□□ -0.53
SREBF1-220ENST00000581707 PRR26Q8N8Z3 221 aa11.76□□□□□ -0.53
SREBF1-220ENST00000581707 TMEM223A0PJW6 202 aa11.75□□□□□ -0.53
SREBF1-220ENST00000581707 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
SREBF1-220ENST00000581707 BCE1O60756 84 aa11.74□□□□□ -0.53
SREBF1-220ENST00000581707 COLCA2A8K830 154 aa11.73□□□□□ -0.53
SREBF1-220ENST00000581707 SERF1AO75920 110 aa11.73□□□□□ -0.53
SREBF1-220ENST00000581707 KRTAP1-4P0C5Y4 121 aa11.73□□□□□ -0.53
SREBF1-220ENST00000581707 LINC00310P59036 64 aa11.72□□□□□ -0.53
SREBF1-220ENST00000581707 IGLV1-50A0A075B6I6 118 aa11.71□□□□□ -0.53
SREBF1-220ENST00000581707 LEPROTL1O95214 131 aa11.71□□□□□ -0.53
SREBF1-220ENST00000581707 RPL28P46779 137 aaKnown RBP11.71□□□□□ -0.53
SREBF1-220ENST00000581707 H0Y8G0 127 aa11.7□□□□□ -0.54
SREBF1-220ENST00000581707 SCO1O75880 301 aa11.7□□□□□ -0.54
SREBF1-220ENST00000581707 RPL24P83731 157 aaKnown RBP11.7□□□□□ -0.54
SREBF1-220ENST00000581707 VPREB1P12018 145 aa11.69□□□□□ -0.54
SREBF1-220ENST00000581707 LINC00158P58513 81 aa11.69□□□□□ -0.54
SREBF1-220ENST00000581707 IGKV2-28A0A075B6P5 120 aa11.67□□□□□ -0.54
SREBF1-220ENST00000581707 IGKV2D-28P01615 120 aa11.67□□□□□ -0.54
SREBF1-220ENST00000581707 HSPB8Q9UJY1 196 aa11.66□□□□□ -0.54
SREBF1-220ENST00000581707 A0A0U1RRA0 63 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms