RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 M0QXV9 152 aa9.34□□□□□ -0.91
CDK5RAP3-219ENST00000580670 XCL1P47992 114 aa9.34□□□□□ -0.91
CDK5RAP3-219ENST00000580670 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
CDK5RAP3-219ENST00000580670 CDKN2A-AS1Q9UH64 79 aa9.34□□□□□ -0.91
CDK5RAP3-219ENST00000580670 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
CDK5RAP3-219ENST00000580670 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
CDK5RAP3-219ENST00000580670 MTURNQ8N3F0 131 aa9.33□□□□□ -0.92
CDK5RAP3-219ENST00000580670 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
CDK5RAP3-219ENST00000580670 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
CDK5RAP3-219ENST00000580670 PSMB2P49721 201 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 CKS1BP61024 79 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 MIAQ16674 131 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 TEN1Q86WV5 123 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 C10orf126Q8N4M7 172 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 TRAV8-4A0A0B4J246 113 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 CFC1BP0CG36 223 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 CFC1P0CG37 223 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
CDK5RAP3-219ENST00000580670 IGHV3OR16-9A0A0B4J2B5 98 aa9.31□□□□□ -0.92
CDK5RAP3-219ENST00000580670 IBA57-AS1B1ANH7 110 aa9.31□□□□□ -0.92
CDK5RAP3-219ENST00000580670 SPINK8P0C7L1 97 aa9.31□□□□□ -0.92
CDK5RAP3-219ENST00000580670 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
CDK5RAP3-219ENST00000580670 LOC107984156A0A0G2JMH3 177 aa9.3□□□□□ -0.92
CDK5RAP3-219ENST00000580670 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
CDK5RAP3-219ENST00000580670 LYSTQ99698 3801 aa9.3□□□□□ -0.92
CDK5RAP3-219ENST00000580670 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 TRAV8-3A0A0A6YYJ7 113 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 TCL1BO95988 128 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 C5orf38Q86SI9 138 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 LINC01600Q96MT4 127 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 Q9HAA7 133 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 TSPEAR-AS2P59090 65 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 C1orf43Q9BWL3 253 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
CDK5RAP3-219ENST00000580670 A0A087WZ39 114 aa9.28□□□□□ -0.92
CDK5RAP3-219ENST00000580670 IGKV2D-24A0A075B6R9 120 aa9.27□□□□□ -0.92
CDK5RAP3-219ENST00000580670 J3QQQ9 107 aa9.27□□□□□ -0.92
CDK5RAP3-219ENST00000580670 COX7A2LO14548 114 aa9.27□□□□□ -0.92
CDK5RAP3-219ENST00000580670 LEPROTO15243 131 aa9.27□□□□□ -0.92
CDK5RAP3-219ENST00000580670 KRTAP1-5Q9BYS1 174 aa9.27□□□□□ -0.92
CDK5RAP3-219ENST00000580670 IGHV1-58A0A0C4DH39 117 aa9.27□□□□□ -0.93
CDK5RAP3-219ENST00000580670 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
CDK5RAP3-219ENST00000580670 A0A0B4J2C4 111 aa9.26□□□□□ -0.93
CDK5RAP3-219ENST00000580670 TTC32Q5I0X7 151 aa9.26□□□□□ -0.93
CDK5RAP3-219ENST00000580670 VPS13DQ5THJ4 4388 aa9.26□□□□□ -0.93
CDK5RAP3-219ENST00000580670 IGLV5-39A0A0G2JS06 123 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 MT-ATP8P03928 68 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 MALP21145 153 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 XGP55808 180 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 RMI2Q96E14 147 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 DNAH1Q9P2D7 4330 aa9.25□□□□□ -0.93
CDK5RAP3-219ENST00000580670 LY6G6CO95867 125 aa9.24□□□□□ -0.93
CDK5RAP3-219ENST00000580670 LINC01561Q8N1V8 128 aa9.24□□□□□ -0.93
CDK5RAP3-219ENST00000580670 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
CDK5RAP3-219ENST00000580670 ANKRD29Q8N6D5 301 aa9.23□□□□□ -0.93
CDK5RAP3-219ENST00000580670 LINC00476Q8WZB0 136 aa9.23□□□□□ -0.93
CDK5RAP3-219ENST00000580670 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 A4D1N5 150 aa9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 EIF4EBP3O60516 100 aaPredicted RBP9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 TOMM7Q9P0U1 55 aa9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 M0R2N4 97 aa9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 SLC25A20O43772 301 aa9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 COX7B2Q8TF08 81 aa9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 ERG28Q9UKR5 140 aa9.22□□□□□ -0.93
CDK5RAP3-219ENST00000580670 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
CDK5RAP3-219ENST00000580670 PRSS2P07478 247 aa9.19□□□□□ -0.94
CDK5RAP3-219ENST00000580670 MUSTN1Q8IVN3 82 aa9.19□□□□□ -0.94
CDK5RAP3-219ENST00000580670 NDUFA12Q9UI09 145 aa9.19□□□□□ -0.94
CDK5RAP3-219ENST00000580670 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
CDK5RAP3-219ENST00000580670 C9JAW5 83 aa9.18□□□□□ -0.94
CDK5RAP3-219ENST00000580670 RPL13AP40429 203 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-219ENST00000580670 ATXN8Q156A1 80 aa9.18□□□□□ -0.94
CDK5RAP3-219ENST00000580670 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
CDK5RAP3-219ENST00000580670 Q8IZM0 81 aa9.18□□□□□ -0.94
CDK5RAP3-219ENST00000580670 SVIPQ8NHG7 77 aa9.18□□□□□ -0.94
CDK5RAP3-219ENST00000580670 A0A0J9YXY3 114 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 SPAG11BQ08648 103 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 CFAP161Q6P656 301 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 Q6ZR54 194 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 NDUFA1O15239 70 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 PSCAO43653 123 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 KIAA0087Q14695 138 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 LINC01620Q4KN68 170 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 C15orf56Q8N910 161 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 LITAFQ99732 161 aa9.17□□□□□ -0.94
CDK5RAP3-219ENST00000580670 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
CDK5RAP3-219ENST00000580670 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
CDK5RAP3-219ENST00000580670 SPANXDQ9BXN6 97 aa9.16□□□□□ -0.94
CDK5RAP3-219ENST00000580670 SPANXCQ9NY87 97 aa9.16□□□□□ -0.94
CDK5RAP3-219ENST00000580670 Q6Q795 121 aa9.15□□□□□ -0.94
CDK5RAP3-219ENST00000580670 LINC00526Q96FQ7 95 aa9.15□□□□□ -0.94
CDK5RAP3-219ENST00000580670 ZNF625Q96I27 306 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-219ENST00000580670 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
CDK5RAP3-219ENST00000580670 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
CDK5RAP3-219ENST00000580670 C2orf82Q6UX34 121 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms