RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 hDV102S1A0JD36 115 aa12.39□□□□□ -0.43
LIMD2-209ENST00000580222 S100A2P29034 98 aa12.39□□□□□ -0.43
LIMD2-209ENST00000580222 CDKN2A-AS1Q9UH64 79 aa12.39□□□□□ -0.43
LIMD2-209ENST00000580222 HIST3H2BBQ8N257 126 aa12.38□□□□□ -0.43
LIMD2-209ENST00000580222 GVQW2A0A096LPI5 108 aaPredicted RBP12.37□□□□□ -0.43
LIMD2-209ENST00000580222 F8VRH5 84 aa12.37□□□□□ -0.43
LIMD2-209ENST00000580222 ORAOV1Q8WV07 137 aa12.37□□□□□ -0.43
LIMD2-209ENST00000580222 MRPL35Q9NZE8 188 aaKnown RBP12.37□□□□□ -0.43
LIMD2-209ENST00000580222 IGLV5-45A0A087WSX0 123 aa12.36□□□□□ -0.43
LIMD2-209ENST00000580222 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
LIMD2-209ENST00000580222 SNRPEP62304 92 aaKnown RBP12.36□□□□□ -0.43
LIMD2-209ENST00000580222 LINC01561Q8N1V8 128 aa12.36□□□□□ -0.43
LIMD2-209ENST00000580222 IGHV3-64A0A075B6Q5 118 aa12.35□□□□□ -0.43
LIMD2-209ENST00000580222 H3BRM9 83 aa12.35□□□□□ -0.43
LIMD2-209ENST00000580222 ZNF561-AS1K7EIQ3 104 aa12.35□□□□□ -0.43
LIMD2-209ENST00000580222 ZNF22P17026 224 aaPredicted RBP12.35□□□□□ -0.43
LIMD2-209ENST00000580222 SPAG11BQ08648 103 aa12.35□□□□□ -0.43
LIMD2-209ENST00000580222 Q6ZRU5 148 aa12.35□□□□□ -0.43
LIMD2-209ENST00000580222 OR10D4PQ8NGN7 298 aa12.35□□□□□ -0.43
LIMD2-209ENST00000580222 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
LIMD2-209ENST00000580222 PANO1I0J062 215 aa12.34□□□□□ -0.43
LIMD2-209ENST00000580222 KRTDAPP60985 99 aa12.34□□□□□ -0.43
LIMD2-209ENST00000580222 TMEM170BQ5T4T1 132 aa12.34□□□□□ -0.43
LIMD2-209ENST00000580222 TMA7Q9Y2S6 64 aaKnown RBP12.34□□□□□ -0.43
LIMD2-209ENST00000580222 LINC00526Q96FQ7 95 aa12.33□□□□□ -0.44
LIMD2-209ENST00000580222 C5orf52A6NGY3 159 aa12.32□□□□□ -0.44
LIMD2-209ENST00000580222 SPINK8P0C7L1 97 aa12.32□□□□□ -0.44
LIMD2-209ENST00000580222 C3orf79P0CE67 100 aa12.32□□□□□ -0.44
LIMD2-209ENST00000580222 HIST1H2BLQ99880 126 aa12.32□□□□□ -0.44
LIMD2-209ENST00000580222 PMCHL2Q9BQD1 86 aa12.32□□□□□ -0.44
LIMD2-209ENST00000580222 TOMM7Q9P0U1 55 aa12.32□□□□□ -0.44
LIMD2-209ENST00000580222 LPAP08519 4548 aa12.32□□□□□ -0.44
LIMD2-209ENST00000580222 SMIM1B2RUZ4 78 aa12.31□□□□□ -0.44
LIMD2-209ENST00000580222 PET117Q6UWS5 81 aa12.31□□□□□ -0.44
LIMD2-209ENST00000580222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.31□□□□□ -0.44
LIMD2-209ENST00000580222 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
LIMD2-209ENST00000580222 DPM2O94777 84 aa12.3□□□□□ -0.44
LIMD2-209ENST00000580222 PRSS2P07478 247 aa12.3□□□□□ -0.44
LIMD2-209ENST00000580222 PLNP26678 52 aa12.3□□□□□ -0.44
LIMD2-209ENST00000580222 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
LIMD2-209ENST00000580222 CAMK2N2Q96S95 79 aa12.29□□□□□ -0.44
LIMD2-209ENST00000580222 IGKCP01834 107 aa12.28□□□□□ -0.44
LIMD2-209ENST00000580222 C2orf48Q96LS8 159 aa12.28□□□□□ -0.44
LIMD2-209ENST00000580222 KRTAP9-2Q9BYQ4 174 aa12.28□□□□□ -0.44
LIMD2-209ENST00000580222 C20orf202A1L168 122 aa12.27□□□□□ -0.45
LIMD2-209ENST00000580222 LINC01545Q5VT33 79 aa12.27□□□□□ -0.45
LIMD2-209ENST00000580222 Q8IZM0 81 aa12.27□□□□□ -0.45
LIMD2-209ENST00000580222 CARD19Q96LW7 228 aa12.27□□□□□ -0.45
LIMD2-209ENST00000580222 SLPIP03973 132 aa12.26□□□□□ -0.45
LIMD2-209ENST00000580222 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
LIMD2-209ENST00000580222 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
LIMD2-209ENST00000580222 TMEM223A0PJW6 202 aa12.25□□□□□ -0.45
LIMD2-209ENST00000580222 NDUFA1O15239 70 aa12.25□□□□□ -0.45
LIMD2-209ENST00000580222 KIAA0087Q14695 138 aa12.25□□□□□ -0.45
LIMD2-209ENST00000580222 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
LIMD2-209ENST00000580222 MUC2Q02817 5179 aa12.24□□□□□ -0.45
LIMD2-209ENST00000580222 F8WDY8 70 aa12.24□□□□□ -0.45
LIMD2-209ENST00000580222 C9orf163Q8N9P6 203 aa12.24□□□□□ -0.45
LIMD2-209ENST00000580222 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
LIMD2-209ENST00000580222 CKS1BP61024 79 aa12.23□□□□□ -0.45
LIMD2-209ENST00000580222 CXCL5P42830 114 aa12.22□□□□□ -0.45
LIMD2-209ENST00000580222 HERVK_113P61574 105 aa12.22□□□□□ -0.45
LIMD2-209ENST00000580222 C2orf82Q6UX34 121 aa12.22□□□□□ -0.45
LIMD2-209ENST00000580222 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.45
LIMD2-209ENST00000580222 SDIM1Q6ZPB5 146 aa12.2□□□□□ -0.46
LIMD2-209ENST00000580222 C10orf25Q5T742 122 aa12.19□□□□□ -0.46
LIMD2-209ENST00000580222 LINC01600Q96MT4 127 aa12.19□□□□□ -0.46
LIMD2-209ENST00000580222 AKR1D1P51857 326 aa12.18□□□□□ -0.46
LIMD2-209ENST00000580222 C6orf48Q9UBA6 75 aa12.18□□□□□ -0.46
LIMD2-209ENST00000580222 PKIGQ9Y2B9 76 aa12.18□□□□□ -0.46
LIMD2-209ENST00000580222 FAT4Q6V0I7 4981 aa12.17□□□□□ -0.46
LIMD2-209ENST00000580222 TRBV30A0A0K0K1B3 111 aa12.17□□□□□ -0.46
LIMD2-209ENST00000580222 RNF151Q2KHN1 245 aa12.16□□□□□ -0.46
LIMD2-209ENST00000580222 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
LIMD2-209ENST00000580222 LEPROTO15243 131 aa12.15□□□□□ -0.46
LIMD2-209ENST00000580222 PLEKHB2Q96CS7 222 aa12.15□□□□□ -0.46
LIMD2-209ENST00000580222 LOC107984640A0A0U1RRK4 108 aa12.14□□□□□ -0.47
LIMD2-209ENST00000580222 KRTAP10-8P60410 259 aa12.14□□□□□ -0.47
LIMD2-209ENST00000580222 E9PLD3 99 aa12.13□□□□□ -0.47
LIMD2-209ENST00000580222 SCGB1D1O95968 90 aa12.13□□□□□ -0.47
LIMD2-209ENST00000580222 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
LIMD2-209ENST00000580222 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
LIMD2-209ENST00000580222 SFTA2Q6UW10 78 aa12.13□□□□□ -0.47
LIMD2-209ENST00000580222 STPG4Q8N801 248 aa12.13□□□□□ -0.47
LIMD2-209ENST00000580222 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
LIMD2-209ENST00000580222 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
LIMD2-209ENST00000580222 C9orf116Q5BN46 136 aaPredicted RBP12.12□□□□□ -0.47
LIMD2-209ENST00000580222 J3QQQ9 107 aa12.11□□□□□ -0.47
LIMD2-209ENST00000580222 A0A096LNI7 61 aa12.1□□□□□ -0.47
LIMD2-209ENST00000580222 IGKV2-24A0A0C4DH68 120 aa12.1□□□□□ -0.47
LIMD2-209ENST00000580222 CHTF8P0CG12 524 aa12.1□□□□□ -0.47
LIMD2-209ENST00000580222 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
LIMD2-209ENST00000580222 ZNF625Q96I27 306 aaPredicted RBP12.1□□□□□ -0.47
LIMD2-209ENST00000580222 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
LIMD2-209ENST00000580222 A0A087WYN8 130 aa12.09□□□□□ -0.47
LIMD2-209ENST00000580222 KRTAP9-6A0A140TA67 174 aa12.09□□□□□ -0.47
LIMD2-209ENST00000580222 TLX1NBP0CAT3 122 aa12.09□□□□□ -0.47
LIMD2-209ENST00000580222 MYMXA0A1B0GTQ4 84 aa12.08□□□□□ -0.48
LIMD2-209ENST00000580222 NDUFC2-KCTD14E9PQ53 114 aa12.08□□□□□ -0.48
LIMD2-209ENST00000580222 HSBP1L1C9JCN9 74 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms