RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 C4BP0C0L5 1744 aa3.92□□□□□ -1.78
COPS3-216ENST00000579716 CABIN1Q9Y6J0 2220 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 ABCA7Q8IZY2 2146 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 IGLV4-69A0A075B6H9 119 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 IGKV3OR2-268A0A0C4DH90 116 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 A0A0J9YWU9 116 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 ARL14EPLP0DKL9 152 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 LINC00322Q6ZN03 302 aaPredicted RBP3.91□□□□□ -1.78
COPS3-216ENST00000579716 SPRR4Q96PI1 79 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 GAFA1Q96PS6 74 aa3.91□□□□□ -1.78
COPS3-216ENST00000579716 PIN1P1O15428 100 aa3.9□□□□□ -1.79
COPS3-216ENST00000579716 SPINK7P58062 85 aa3.9□□□□□ -1.79
COPS3-216ENST00000579716 NDPQ00604 133 aa3.9□□□□□ -1.79
COPS3-216ENST00000579716 COX17Q14061 63 aa3.9□□□□□ -1.79
COPS3-216ENST00000579716 DEFB114Q30KQ6 69 aa3.9□□□□□ -1.79
COPS3-216ENST00000579716 Q6ZTI0 123 aa3.9□□□□□ -1.79
COPS3-216ENST00000579716 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
COPS3-216ENST00000579716 INTS1Q8N201 2190 aaKnown RBP3.89□□□□□ -1.79
COPS3-216ENST00000579716 MDC1Q14676 2089 aaKnown RBP3.88□□□□□ -1.79
COPS3-216ENST00000579716 IGLV3-1P01715 115 aa3.88□□□□□ -1.79
COPS3-216ENST00000579716 RNASE3P12724 160 aaKnown RBP3.88□□□□□ -1.79
COPS3-216ENST00000579716 IL9P15248 144 aa3.88□□□□□ -1.79
COPS3-216ENST00000579716 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
COPS3-216ENST00000579716 KLK9Q9UKQ9 250 aa3.88□□□□□ -1.79
COPS3-216ENST00000579716 CR1P17927 2039 aa3.88□□□□□ -1.79
COPS3-216ENST00000579716 TRGV4A0A0C4DH28 118 aa3.87□□□□□ -1.79
COPS3-216ENST00000579716 TRBV6-4A0A1B0GX49 114 aa3.87□□□□□ -1.79
COPS3-216ENST00000579716 NDUFA3O95167 84 aa3.87□□□□□ -1.79
COPS3-216ENST00000579716 H0YGX0 51 aa3.86□□□□□ -1.79
COPS3-216ENST00000579716 NDUFA4O00483 81 aa3.86□□□□□ -1.79
COPS3-216ENST00000579716 DEFB112Q30KQ8 113 aa3.86□□□□□ -1.79
COPS3-216ENST00000579716 PLXNB2O15031 1838 aa3.86□□□□□ -1.79
COPS3-216ENST00000579716 MED12Q93074 2177 aa3.85□□□□□ -1.79
COPS3-216ENST00000579716 IGKV2-40A0A087WW87 121 aaPredicted RBP3.85□□□□□ -1.79
COPS3-216ENST00000579716 ZNF861PO60384 105 aa3.85□□□□□ -1.79
COPS3-216ENST00000579716 IGKV2D-40P01614 121 aaPredicted RBP3.85□□□□□ -1.79
COPS3-216ENST00000579716 DEFB132Q7Z7B7 95 aa3.85□□□□□ -1.79
COPS3-216ENST00000579716 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
COPS3-216ENST00000579716 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
COPS3-216ENST00000579716 TET1Q8NFU7 2136 aa3.85□□□□□ -1.79
COPS3-216ENST00000579716 LY6EQ16553 131 aa3.84□□□□□ -1.79
COPS3-216ENST00000579716 R4GN34 69 aa3.84□□□□□ -1.79
COPS3-216ENST00000579716 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
COPS3-216ENST00000579716 A0A087WTM6 91 aa3.82□□□□□ -1.8
COPS3-216ENST00000579716 LOC110117498A0A087WWA1 95 aa3.82□□□□□ -1.8
COPS3-216ENST00000579716 RPL37AP61513 92 aaKnown RBP3.82□□□□□ -1.8
COPS3-216ENST00000579716 CUL9Q8IWT3 2517 aa3.82□□□□□ -1.8
COPS3-216ENST00000579716 COL27A1Q8IZC6 1860 aaPredicted RBP3.81□□□□□ -1.8
COPS3-216ENST00000579716 COL5A1P20908 1838 aaPredicted RBP3.81□□□□□ -1.8
COPS3-216ENST00000579716 IGLV3-19P01714 112 aa3.81□□□□□ -1.8
COPS3-216ENST00000579716 ESPL1Q14674 2120 aa3.81□□□□□ -1.8
COPS3-216ENST00000579716 COA5Q86WW8 74 aa3.81□□□□□ -1.8
COPS3-216ENST00000579716 COL4A5P29400 1685 aa3.81□□□□□ -1.8
COPS3-216ENST00000579716 DNAJC13O75165 2243 aa3.8□□□□□ -1.8
COPS3-216ENST00000579716 A0A1W2PNN7 141 aa3.8□□□□□ -1.8
COPS3-216ENST00000579716 HAMPP81172 84 aa3.8□□□□□ -1.8
COPS3-216ENST00000579716 NUP214P35658 2090 aaPredicted RBP3.8□□□□□ -1.8
COPS3-216ENST00000579716 PRRC2BQ5JSZ5 2229 aaKnown RBP3.79□□□□□ -1.8
COPS3-216ENST00000579716 ARFGEF3Q5TH69 2177 aa3.79□□□□□ -1.8
COPS3-216ENST00000579716 NBDYA0A0U1RRE5 68 aa3.79□□□□□ -1.8
COPS3-216ENST00000579716 ETDCA0A1B0GVM5 59 aa3.79□□□□□ -1.8
COPS3-216ENST00000579716 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
COPS3-216ENST00000579716 KRTAP10-3P60369 221 aa3.79□□□□□ -1.8
COPS3-216ENST00000579716 ARHGAP32A7KAX9 2087 aa3.79□□□□□ -1.8
COPS3-216ENST00000579716 KCNQ1DNQ9H478 68 aa3.78□□□□□ -1.8
COPS3-216ENST00000579716 SPAG17Q6Q759 2223 aa3.77□□□□□ -1.81
COPS3-216ENST00000579716 TRGV2A0A075B6R0 118 aa3.77□□□□□ -1.81
COPS3-216ENST00000579716 IGKV3-15P01624 115 aa3.77□□□□□ -1.81
COPS3-216ENST00000579716 CCL26Q9Y258 94 aa3.77□□□□□ -1.81
COPS3-216ENST00000579716 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
COPS3-216ENST00000579716 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
COPS3-216ENST00000579716 RPL38P63173 70 aaKnown RBP3.76□□□□□ -1.81
COPS3-216ENST00000579716 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
COPS3-216ENST00000579716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.75□□□□□ -1.81
COPS3-216ENST00000579716 IGKV2-29A2NJV5 120 aaPredicted RBP3.75□□□□□ -1.81
COPS3-216ENST00000579716 COX7BP24311 80 aa3.75□□□□□ -1.81
COPS3-216ENST00000579716 LINC00612Q8N6U2 182 aa3.75□□□□□ -1.81
COPS3-216ENST00000579716 C5orf56Q8N8D9 126 aa3.75□□□□□ -1.81
COPS3-216ENST00000579716 LINC00472Q9H8W2 130 aa3.75□□□□□ -1.81
COPS3-216ENST00000579716 A0A1B0GU69 56 aa3.74□□□□□ -1.81
COPS3-216ENST00000579716 IGKV4-1P06312 121 aa3.74□□□□□ -1.81
COPS3-216ENST00000579716 CACNA1DQ01668 2161 aa3.73□□□□□ -1.81
COPS3-216ENST00000579716 Q96NJ1 140 aa3.73□□□□□ -1.81
COPS3-216ENST00000579716 NCR3O14931 201 aa3.72□□□□□ -1.81
COPS3-216ENST00000579716 HRES1P13985 223 aa3.72□□□□□ -1.81
COPS3-216ENST00000579716 C10orf55Q5SWW7 151 aa3.72□□□□□ -1.81
COPS3-216ENST00000579716 A0A0G2JQZ4 141 aa3.71□□□□□ -1.82
COPS3-216ENST00000579716 MRPL33O75394 65 aaKnown RBP3.71□□□□□ -1.82
COPS3-216ENST00000579716 TFF3Q07654 80 aa3.71□□□□□ -1.82
COPS3-216ENST00000579716 SPINK14Q6IE38 97 aa3.71□□□□□ -1.82
COPS3-216ENST00000579716 ZFHX3Q15911 3703 aa3.71□□□□□ -1.82
COPS3-216ENST00000579716 ACYP2P14621 99 aa3.7□□□□□ -1.82
COPS3-216ENST00000579716 DEFB134Q4QY38 66 aa3.7□□□□□ -1.82
COPS3-216ENST00000579716 IAPPP10997 89 aa3.69□□□□□ -1.82
COPS3-216ENST00000579716 SMIM2Q9BVW6 85 aa3.69□□□□□ -1.82
COPS3-216ENST00000579716 IGLV4-60A0A075B6I1 120 aa3.68□□□□□ -1.82
COPS3-216ENST00000579716 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
COPS3-216ENST00000579716 RPS27LQ71UM5 84 aaKnown RBP3.68□□□□□ -1.82
COPS3-216ENST00000579716 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms