RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 Q6ZN92 141 aa12.32□□□□□ -0.44
TSEN54-205ENST00000578415 C2orf88Q9BSF0 95 aa12.32□□□□□ -0.44
TSEN54-205ENST00000578415 Q8IZM0 81 aa12.31□□□□□ -0.44
TSEN54-205ENST00000578415 AMELXQ99217 191 aa12.31□□□□□ -0.44
TSEN54-205ENST00000578415 PRSS47A8MTI9 375 aa12.3□□□□□ -0.44
TSEN54-205ENST00000578415 RPL28P46779 137 aaKnown RBP12.3□□□□□ -0.44
TSEN54-205ENST00000578415 C6orf226Q5I0X4 101 aa12.3□□□□□ -0.44
TSEN54-205ENST00000578415 TYMSOSQ8TAI1 123 aa12.3□□□□□ -0.44
TSEN54-205ENST00000578415 TP73-AS1Q9UF72 201 aa12.3□□□□□ -0.44
TSEN54-205ENST00000578415 LOC389332A0A1B0GUA5 103 aa12.29□□□□□ -0.44
TSEN54-205ENST00000578415 BCE1O60756 84 aa12.29□□□□□ -0.44
TSEN54-205ENST00000578415 CRYGAP11844 174 aa12.29□□□□□ -0.44
TSEN54-205ENST00000578415 MRPL55Q7Z7F7 128 aaKnown RBP12.29□□□□□ -0.44
TSEN54-205ENST00000578415 CYSLTR1Q9Y271 337 aa12.29□□□□□ -0.44
TSEN54-205ENST00000578415 C2orf66Q6UXQ4 117 aa12.28□□□□□ -0.44
TSEN54-205ENST00000578415 FAM19A3Q7Z5A8 133 aa12.28□□□□□ -0.44
TSEN54-205ENST00000578415 ALKBH7Q9BT30 221 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-205ENST00000578415 MT-ND4LP03901 98 aa12.27□□□□□ -0.45
TSEN54-205ENST00000578415 ATP5L2Q7Z4Y8 100 aa12.27□□□□□ -0.45
TSEN54-205ENST00000578415 VCX2Q9H322 139 aa12.27□□□□□ -0.45
TSEN54-205ENST00000578415 ANAPC11Q9NYG5 84 aa12.27□□□□□ -0.45
TSEN54-205ENST00000578415 SVBPQ8N300 66 aa12.26□□□□□ -0.45
TSEN54-205ENST00000578415 IGIPA6NJ69 53 aa12.25□□□□□ -0.45
TSEN54-205ENST00000578415 F8VRH5 84 aa12.25□□□□□ -0.45
TSEN54-205ENST00000578415 KRTAP13-2Q52LG2 175 aa12.25□□□□□ -0.45
TSEN54-205ENST00000578415 MAP1LC3AQ9H492 121 aa12.25□□□□□ -0.45
TSEN54-205ENST00000578415 LAMTOR2Q9Y2Q5 125 aa12.25□□□□□ -0.45
TSEN54-205ENST00000578415 SNAPINO95295 136 aa12.24□□□□□ -0.45
TSEN54-205ENST00000578415 Q8N8P6 123 aa12.24□□□□□ -0.45
TSEN54-205ENST00000578415 RETNLBQ9BQ08 111 aa12.24□□□□□ -0.45
TSEN54-205ENST00000578415 CDKN2A-AS1Q9UH64 79 aa12.24□□□□□ -0.45
TSEN54-205ENST00000578415 MUC17Q685J3 4493 aa12.23□□□□□ -0.45
TSEN54-205ENST00000578415 ATP6V1G1O75348 118 aa12.23□□□□□ -0.45
TSEN54-205ENST00000578415 NPSP0C0P6 89 aa12.23□□□□□ -0.45
TSEN54-205ENST00000578415 ANAPC16Q96DE5 110 aa12.23□□□□□ -0.45
TSEN54-205ENST00000578415 LINC00167Q96N53 147 aa12.23□□□□□ -0.45
TSEN54-205ENST00000578415 RPS10P5Q9NQ39 176 aa12.23□□□□□ -0.45
TSEN54-205ENST00000578415 RPL37AP8A6NKH3 93 aa12.22□□□□□ -0.45
TSEN54-205ENST00000578415 RHEBQ15382 184 aa12.22□□□□□ -0.45
TSEN54-205ENST00000578415 KRTAP9-6A0A140TA67 174 aa12.21□□□□□ -0.45
TSEN54-205ENST00000578415 HERVK_113P63121 156 aa12.21□□□□□ -0.45
TSEN54-205ENST00000578415 KRTAP13-1Q8IUC0 172 aa12.21□□□□□ -0.45
TSEN54-205ENST00000578415 ORMDL2Q53FV1 153 aa12.2□□□□□ -0.46
TSEN54-205ENST00000578415 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
TSEN54-205ENST00000578415 CXCL5P42830 114 aa12.19□□□□□ -0.46
TSEN54-205ENST00000578415 S100A1P23297 94 aa12.18□□□□□ -0.46
TSEN54-205ENST00000578415 SEC11AP67812 179 aa12.18□□□□□ -0.46
TSEN54-205ENST00000578415 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
TSEN54-205ENST00000578415 GEMIN7Q9H840 131 aaKnown RBP12.17□□□□□ -0.46
TSEN54-205ENST00000578415 K7EMI3 77 aa12.16□□□□□ -0.46
TSEN54-205ENST00000578415 TPRXLQ17RH7 258 aa12.16□□□□□ -0.46
TSEN54-205ENST00000578415 IGLV5-37A0A075B6J1 123 aa12.15□□□□□ -0.46
TSEN54-205ENST00000578415 SMIM1B2RUZ4 78 aa12.15□□□□□ -0.46
TSEN54-205ENST00000578415 FAM229BQ4G0N7 80 aa12.15□□□□□ -0.46
TSEN54-205ENST00000578415 CDIP1Q9H305 208 aa12.15□□□□□ -0.46
TSEN54-205ENST00000578415 UBE2AP49459 152 aa12.14□□□□□ -0.47
TSEN54-205ENST00000578415 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
TSEN54-205ENST00000578415 TIMM17AQ99595 171 aa12.14□□□□□ -0.47
TSEN54-205ENST00000578415 S100PP25815 95 aa12.13□□□□□ -0.47
TSEN54-205ENST00000578415 IGLV7-46A0A075B6I9 117 aa12.12□□□□□ -0.47
TSEN54-205ENST00000578415 COX7B2Q8TF08 81 aa12.12□□□□□ -0.47
TSEN54-205ENST00000578415 NXT2Q9NPJ8 142 aaKnown RBP12.12□□□□□ -0.47
TSEN54-205ENST00000578415 PDZD11Q5EBL8 140 aa12.11□□□□□ -0.47
TSEN54-205ENST00000578415 TOMM6Q96B49 74 aa12.11□□□□□ -0.47
TSEN54-205ENST00000578415 SCO1O75880 301 aa12.1□□□□□ -0.47
TSEN54-205ENST00000578415 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
TSEN54-205ENST00000578415 RAB5BP61020 215 aa12.09□□□□□ -0.47
TSEN54-205ENST00000578415 NKAPP1Q8N9T2 125 aa12.09□□□□□ -0.47
TSEN54-205ENST00000578415 SMCO4Q9NRQ5 59 aa12.09□□□□□ -0.47
TSEN54-205ENST00000578415 IGKV2-28A0A075B6P5 120 aa12.08□□□□□ -0.48
TSEN54-205ENST00000578415 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
TSEN54-205ENST00000578415 IGKV2D-28P01615 120 aa12.08□□□□□ -0.48
TSEN54-205ENST00000578415 CBLN2Q8IUK8 224 aa12.08□□□□□ -0.48
TSEN54-205ENST00000578415 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
TSEN54-205ENST00000578415 G0S2P27469 103 aa12.07□□□□□ -0.48
TSEN54-205ENST00000578415 PRLHP81277 87 aa12.07□□□□□ -0.48
TSEN54-205ENST00000578415 ERASQ7Z444 233 aa12.07□□□□□ -0.48
TSEN54-205ENST00000578415 TRAV9-1A0A075B6T8 112 aa12.06□□□□□ -0.48
TSEN54-205ENST00000578415 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
TSEN54-205ENST00000578415 CTAG1AP78358 180 aa12.05□□□□□ -0.48
TSEN54-205ENST00000578415 SCGB3A1Q96QR1 104 aa12.05□□□□□ -0.48
TSEN54-205ENST00000578415 TMEM238C9JI98 176 aa12.02□□□□□ -0.49
TSEN54-205ENST00000578415 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
TSEN54-205ENST00000578415 KIAA1644Q3SXP7 199 aa12.01□□□□□ -0.49
TSEN54-205ENST00000578415 FAM19A1Q7Z5A9 133 aa12.01□□□□□ -0.49
TSEN54-205ENST00000578415 C3orf22Q8N5N4 141 aa12.01□□□□□ -0.49
TSEN54-205ENST00000578415 TMEM126AQ9H061 195 aa12.01□□□□□ -0.49
TSEN54-205ENST00000578415 CST9LQ9H4G1 147 aa12.01□□□□□ -0.49
TSEN54-205ENST00000578415 VPREB1P12018 145 aa12□□□□□ -0.49
TSEN54-205ENST00000578415 ATP5LO75964 103 aa11.99□□□□□ -0.49
TSEN54-205ENST00000578415 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
TSEN54-205ENST00000578415 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
TSEN54-205ENST00000578415 M0R378 163 aa11.98□□□□□ -0.49
TSEN54-205ENST00000578415 PFN2P35080 140 aa11.98□□□□□ -0.49
TSEN54-205ENST00000578415 COX19Q49B96 90 aa11.96□□□□□ -0.49
TSEN54-205ENST00000578415 MRPL18Q9H0U6 180 aaKnown RBP11.96□□□□□ -0.49
TSEN54-205ENST00000578415 SND1-IT1Q9HBX3 110 aa11.96□□□□□ -0.49
TSEN54-205ENST00000578415 LINC01546A6NGU7 62 aa11.95□□□□□ -0.5
TSEN54-205ENST00000578415 PMVKQ15126 192 aa11.95□□□□□ -0.5
TSEN54-205ENST00000578415 Q8NDZ9 215 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms