RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 FAM19A5Q7Z5A7 132 aaPredicted RBP12.8□□□□□ -0.36
LIMD2-202ENST00000578061 LINC00469Q8N7U9 141 aa12.8□□□□□ -0.36
LIMD2-202ENST00000578061 HMCN2Q8NDA2 5059 aa12.8□□□□□ -0.36
LIMD2-202ENST00000578061 MT1HL1P0DM35 61 aa12.79□□□□□ -0.36
LIMD2-202ENST00000578061 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
LIMD2-202ENST00000578061 Q8IZM0 81 aa12.78□□□□□ -0.36
LIMD2-202ENST00000578061 C18orf32Q8TCD1 76 aa12.78□□□□□ -0.36
LIMD2-202ENST00000578061 URB1-AS1Q96HZ7 61 aa12.78□□□□□ -0.36
LIMD2-202ENST00000578061 PSORS1C2Q9UIG4 136 aa12.78□□□□□ -0.36
LIMD2-202ENST00000578061 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.37
LIMD2-202ENST00000578061 TINCRA0A1B0GVN0 87 aa12.76□□□□□ -0.37
LIMD2-202ENST00000578061 LINC01549A6NIU2 74 aa12.76□□□□□ -0.37
LIMD2-202ENST00000578061 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
LIMD2-202ENST00000578061 PMVKQ15126 192 aa12.75□□□□□ -0.37
LIMD2-202ENST00000578061 PMCHL1Q16048 86 aa12.75□□□□□ -0.37
LIMD2-202ENST00000578061 C9orf129Q5T035 196 aaKnown RBP12.75□□□□□ -0.37
LIMD2-202ENST00000578061 KRTAP7-1Q8IUC3 87 aa12.75□□□□□ -0.37
LIMD2-202ENST00000578061 A0A096LNJ9 63 aa12.74□□□□□ -0.37
LIMD2-202ENST00000578061 SMIM1B2RUZ4 78 aa12.74□□□□□ -0.37
LIMD2-202ENST00000578061 LINC00614P0C842 121 aa12.74□□□□□ -0.37
LIMD2-202ENST00000578061 SRSF9Q13242 221 aaKnown RBP eCLIP12.74□□□□□ -0.37
LIMD2-202ENST00000578061 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
LIMD2-202ENST00000578061 KRTAP11-1Q8IUC1 163 aa12.74□□□□□ -0.37
LIMD2-202ENST00000578061 NDUFA6P56556 154 aa12.73□□□□□ -0.37
LIMD2-202ENST00000578061 SERTAD4-AS1Q5TG53 156 aa12.73□□□□□ -0.37
LIMD2-202ENST00000578061 IGLV5-45A0A087WSX0 123 aa12.72□□□□□ -0.37
LIMD2-202ENST00000578061 SPINK8P0C7L1 97 aa12.72□□□□□ -0.37
LIMD2-202ENST00000578061 TNXBP22105 4242 aa12.71□□□□□ -0.37
LIMD2-202ENST00000578061 F8VRH5 84 aa12.71□□□□□ -0.37
LIMD2-202ENST00000578061 PDZD11Q5EBL8 140 aa12.71□□□□□ -0.37
LIMD2-202ENST00000578061 COX7B2Q8TF08 81 aa12.71□□□□□ -0.37
LIMD2-202ENST00000578061 YPEL4Q96NS1 127 aa12.71□□□□□ -0.37
LIMD2-202ENST00000578061 M0QXV9 152 aa12.7□□□□□ -0.38
LIMD2-202ENST00000578061 HBDP02042 147 aa12.7□□□□□ -0.38
LIMD2-202ENST00000578061 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
LIMD2-202ENST00000578061 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
LIMD2-202ENST00000578061 REG3GQ6UW15 175 aa12.68□□□□□ -0.38
LIMD2-202ENST00000578061 CXCL5P42830 114 aa12.67□□□□□ -0.38
LIMD2-202ENST00000578061 UBE2BP63146 152 aa12.67□□□□□ -0.38
LIMD2-202ENST00000578061 CBLN2Q8IUK8 224 aa12.67□□□□□ -0.38
LIMD2-202ENST00000578061 IGLC3P0DOY3 106 aa12.66□□□□□ -0.38
LIMD2-202ENST00000578061 RAB5BP61020 215 aa12.66□□□□□ -0.38
LIMD2-202ENST00000578061 ODF1Q14990 250 aa12.66□□□□□ -0.38
LIMD2-202ENST00000578061 H3BRM9 83 aa12.65□□□□□ -0.38
LIMD2-202ENST00000578061 PLA2G2DQ9UNK4 145 aa12.65□□□□□ -0.38
LIMD2-202ENST00000578061 IGLV7-43P04211 117 aa12.64□□□□□ -0.39
LIMD2-202ENST00000578061 ZNF22P17026 224 aaPredicted RBP12.63□□□□□ -0.39
LIMD2-202ENST00000578061 BAGE3Q86Y29 109 aa12.63□□□□□ -0.39
LIMD2-202ENST00000578061 SLC7A5P1Q8MH63 180 aa12.63□□□□□ -0.39
LIMD2-202ENST00000578061 ATP5LO75964 103 aa12.62□□□□□ -0.39
LIMD2-202ENST00000578061 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
LIMD2-202ENST00000578061 C11orf86A6NJI1 115 aa12.59□□□□□ -0.39
LIMD2-202ENST00000578061 KRTAP10-8P60410 259 aa12.59□□□□□ -0.39
LIMD2-202ENST00000578061 IGLV5-39A0A0G2JS06 123 aa12.58□□□□□ -0.4
LIMD2-202ENST00000578061 CHCHD1Q96BP2 118 aaKnown RBP12.58□□□□□ -0.4
LIMD2-202ENST00000578061 TMEM170BQ5T4T1 132 aa12.57□□□□□ -0.4
LIMD2-202ENST00000578061 DIRC1Q969H9 104 aa12.57□□□□□ -0.4
LIMD2-202ENST00000578061 CHTOPQ9Y3Y2 248 aaKnown RBP12.56□□□□□ -0.4
LIMD2-202ENST00000578061 TRGC2P03986 189 aa12.55□□□□□ -0.4
LIMD2-202ENST00000578061 PFN2P35080 140 aa12.55□□□□□ -0.4
LIMD2-202ENST00000578061 LBHQ53QV2 105 aaPredicted RBP12.55□□□□□ -0.4
LIMD2-202ENST00000578061 H0Y9J4 135 aa12.54□□□□□ -0.4
LIMD2-202ENST00000578061 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
LIMD2-202ENST00000578061 MRPL55Q7Z7F7 128 aaKnown RBP12.53□□□□□ -0.4
LIMD2-202ENST00000578061 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
LIMD2-202ENST00000578061 ZNF625Q96I27 306 aaPredicted RBP12.53□□□□□ -0.4
LIMD2-202ENST00000578061 UBR4Q5T4S7 5183 aa12.53□□□□□ -0.4
LIMD2-202ENST00000578061 GAGE10A6NGK3 116 aa12.52□□□□□ -0.41
LIMD2-202ENST00000578061 HSBP1O75506 76 aa12.52□□□□□ -0.41
LIMD2-202ENST00000578061 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
LIMD2-202ENST00000578061 TP73-AS1Q9UF72 201 aa12.51□□□□□ -0.41
LIMD2-202ENST00000578061 PRR26Q8N8Z3 221 aa12.5□□□□□ -0.41
LIMD2-202ENST00000578061 LINC00167Q96N53 147 aa12.5□□□□□ -0.41
LIMD2-202ENST00000578061 ERG28Q9UKR5 140 aa12.5□□□□□ -0.41
LIMD2-202ENST00000578061 TRAV12-1A0A0B4J245 112 aa12.49□□□□□ -0.41
LIMD2-202ENST00000578061 SCO1O75880 301 aa12.48□□□□□ -0.41
LIMD2-202ENST00000578061 TMEM223A0PJW6 202 aa12.47□□□□□ -0.41
LIMD2-202ENST00000578061 H0Y8G0 127 aa12.47□□□□□ -0.41
LIMD2-202ENST00000578061 NUPR1O60356 82 aa12.47□□□□□ -0.41
LIMD2-202ENST00000578061 NKAPP1Q8N9T2 125 aa12.47□□□□□ -0.41
LIMD2-202ENST00000578061 ZNF861PO60384 105 aa12.46□□□□□ -0.41
LIMD2-202ENST00000578061 SERF1AO75920 110 aa12.46□□□□□ -0.41
LIMD2-202ENST00000578061 LINC00310P59036 64 aa12.46□□□□□ -0.41
LIMD2-202ENST00000578061 SND1-IT1Q9HBX3 110 aa12.46□□□□□ -0.41
LIMD2-202ENST00000578061 IGLV5-37A0A075B6J1 123 aa12.45□□□□□ -0.42
LIMD2-202ENST00000578061 COLCA2A8K830 154 aa12.45□□□□□ -0.42
LIMD2-202ENST00000578061 KRTAP1-4P0C5Y4 121 aa12.44□□□□□ -0.42
LIMD2-202ENST00000578061 BCE1O60756 84 aa12.43□□□□□ -0.42
LIMD2-202ENST00000578061 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
LIMD2-202ENST00000578061 COX17Q14061 63 aa12.42□□□□□ -0.42
LIMD2-202ENST00000578061 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
LIMD2-202ENST00000578061 LEPROTL1O95214 131 aa12.41□□□□□ -0.42
LIMD2-202ENST00000578061 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
LIMD2-202ENST00000578061 LINC00158P58513 81 aa12.41□□□□□ -0.42
LIMD2-202ENST00000578061 VPREB1P12018 145 aa12.4□□□□□ -0.42
LIMD2-202ENST00000578061 FABP4P15090 132 aa12.4□□□□□ -0.42
LIMD2-202ENST00000578061 SFTA2Q6UW10 78 aa12.4□□□□□ -0.42
LIMD2-202ENST00000578061 Q8NDZ9 215 aa12.4□□□□□ -0.42
LIMD2-202ENST00000578061 RPL28P46779 137 aaKnown RBP12.39□□□□□ -0.43
LIMD2-202ENST00000578061 LRP2P98164 4655 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms