RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 A0A1B0GX51 115 aa-1.04□□□□□ -2.58
CDH8-204ENST00000577536 MT1EP04732 61 aa-1.04□□□□□ -2.58
CDH8-204ENST00000577536 IGLC1P0CG04 106 aa-1.04□□□□□ -2.58
CDH8-204ENST00000577536 FGF7P21781 194 aa-1.04□□□□□ -2.58
CDH8-204ENST00000577536 SAMD13Q5VXD3 122 aa-1.04□□□□□ -2.58
CDH8-204ENST00000577536 HOPXQ9BPY8 73 aaPredicted RBP-1.04□□□□□ -2.58
CDH8-204ENST00000577536 GID8Q9NWU2 228 aa-1.04□□□□□ -2.58
CDH8-204ENST00000577536 SPANXCQ9NY87 97 aa-1.04□□□□□ -2.58
CDH8-204ENST00000577536 TLN2Q9Y4G6 2542 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 C1orf167Q5SNV9 1468 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 CLIP1P30622 1438 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 PRG4Q92954 1404 aaPredicted RBP-1.05□□□□□ -2.58
CDH8-204ENST00000577536 NCOA3Q9Y6Q9 1424 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 ANKRD30AQ9BXX3 1397 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 CSMD1Q96PZ7 3565 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 H7BZZ5 65 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 M0R129 80 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 TFAMQ00059 246 aaKnown RBP-1.05□□□□□ -2.58
CDH8-204ENST00000577536 PCBD2Q9H0N5 130 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 CDK5RAP2Q96SN8 1893 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 ZFHX3Q15911 3703 aa-1.05□□□□□ -2.58
CDH8-204ENST00000577536 XRN1Q8IZH2 1706 aaKnown RBP-1.06□□□□□ -2.58
CDH8-204ENST00000577536 ARAP2Q8WZ64 1704 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 A0A1B0GU69 56 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 FAM236AA0A1B0GUQ0 79 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 FAM236BA0A1B0GV22 79 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 DBIP07108 87 aaKnown RBP-1.06□□□□□ -2.58
CDH8-204ENST00000577536 IGLC6P0CF74 106 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 GUCA1AP43080 201 aaPredicted RBP-1.06□□□□□ -2.58
CDH8-204ENST00000577536 C5orf38Q86SI9 138 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 SKA2Q8WVK7 121 aaPredicted RBP-1.06□□□□□ -2.58
CDH8-204ENST00000577536 LCN9Q8WX39 176 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 TMEM191AQ9H0A3 160 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 ARL2-SNX15V9GYD0 113 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 SYNJ1O43426 1573 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 PLEKHH2Q8IVE3 1493 aa-1.06□□□□□ -2.58
CDH8-204ENST00000577536 PSME4Q14997 1843 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 A0A087WVE0 104 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 A0A1B0GWA3 101 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 TMEM238C9JI98 176 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 S100GP29377 79 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 SNCAP37840 140 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 MORN2Q502X0 79 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 NMSQ5H8A3 153 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 C9orf153Q5TBE3 101 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 C12orf73Q69YU5 71 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 KCNRGQ8N5I3 272 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 MYOZ3Q8TDC0 251 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 MT1LQ93083 61 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 TSLPQ969D9 159 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 SELENOSQ9BQE4 189 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 LINC00846Q9NV44 126 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 ITPR2Q14571 2701 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 NLRP1Q9C000 1473 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 TET3O43151 1660 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 MYOM1P52179 1685 aa-1.07□□□□□ -2.58
CDH8-204ENST00000577536 EDC4Q6P2E9 1401 aaKnown RBP-1.07□□□□□ -2.58
CDH8-204ENST00000577536 SMG6Q86US8 1419 aaKnown RBP-1.07□□□□□ -2.58
CDH8-204ENST00000577536 SMG1Q96Q15 3661 aaKnown RBP-1.08□□□□□ -2.58
CDH8-204ENST00000577536 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.08□□□□□ -2.58
CDH8-204ENST00000577536 BCORQ6W2J9 1755 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 LRRC37AA6NMS7 1700 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 CHKB-CPT1BH3BT56 60 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 J3QR89 54 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 SMR3BP02814 79 aaPredicted RBP-1.08□□□□□ -2.58
CDH8-204ENST00000577536 TSPAN19P0C672 248 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 CCDC153Q494R4 210 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 FAM223AQ8IWN6 122 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 MT1MQ8N339 61 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 CHMP6Q96FZ7 201 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 SPANXA1Q9NS26 97 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 HSPB11Q9Y547 144 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 OVOS2A0A0J9YW53 1432 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 OVOS2Q6IE36 1432 aa-1.08□□□□□ -2.58
CDH8-204ENST00000577536 KIAA1551Q9HCM1 1747 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 PDCD11Q14690 1871 aaKnown RBP-1.09□□□□□ -2.58
CDH8-204ENST00000577536 TRRAPQ9Y4A5 3859 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 SPTY2D1-AS1A0A0U1RR47 76 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 A0A1B0GV72 72 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 E5RI56 91 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 SAA2P0DJI9 122 aaPredicted RBP-1.09□□□□□ -2.58
CDH8-204ENST00000577536 LINC00694P0DN24 101 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 PRLHP81277 87 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 COX6B2Q6YFQ2 88 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 C6orf201Q7Z4U5 140 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 ARL11Q969Q4 196 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 CENPHQ9H3R5 247 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 PSENENQ9NZ42 101 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 UQCR10Q9UDW1 63 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 GINS2Q9Y248 185 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 DNAH17Q9UFH2 4485 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 DMXL2Q8TDJ6 3036 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 ANKRD36A6QL64 1941 aa-1.09□□□□□ -2.58
CDH8-204ENST00000577536 ADGRL2O95490 1459 aa-1.1□□□□□ -2.59
CDH8-204ENST00000577536 TSTD3H0UI37 97 aa-1.1□□□□□ -2.59
CDH8-204ENST00000577536 MT2AP02795 61 aa-1.1□□□□□ -2.59
CDH8-204ENST00000577536 MT1BP07438 61 aa-1.1□□□□□ -2.59
CDH8-204ENST00000577536 CLPSL2Q6UWE3 100 aa-1.1□□□□□ -2.59
CDH8-204ENST00000577536 COPS9Q8WXC6 57 aa-1.1□□□□□ -2.59
CDH8-204ENST00000577536 PP6455Q8WZ26 134 aa-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms