RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
CCDC40-210ENST00000573903 NDUFA1O15239 70 aa7.51□□□□□ -1.21
CCDC40-210ENST00000573903 PACRGQ96M98 296 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-210ENST00000573903 PSORS1C2Q9UIG4 136 aa7.51□□□□□ -1.21
CCDC40-210ENST00000573903 PRSS2P07478 247 aa7.5□□□□□ -1.21
CCDC40-210ENST00000573903 PMVKQ15126 192 aa7.5□□□□□ -1.21
CCDC40-210ENST00000573903 RNF151Q2KHN1 245 aa7.5□□□□□ -1.21
CCDC40-210ENST00000573903 C1orf137Q5JT78 98 aa7.5□□□□□ -1.21
CCDC40-210ENST00000573903 CHCHD1Q96BP2 118 aaKnown RBP7.5□□□□□ -1.21
CCDC40-210ENST00000573903 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
CCDC40-210ENST00000573903 MRPL35Q9NZE8 188 aaKnown RBP7.5□□□□□ -1.21
CCDC40-210ENST00000573903 LRP2P98164 4655 aa7.49□□□□□ -1.21
CCDC40-210ENST00000573903 A0A096LNJ9 63 aa7.49□□□□□ -1.21
CCDC40-210ENST00000573903 ATP5LO75964 103 aa7.49□□□□□ -1.21
CCDC40-210ENST00000573903 LINC00469Q8N7U9 141 aa7.49□□□□□ -1.21
CCDC40-210ENST00000573903 TINCRA0A1B0GVN0 87 aa7.48□□□□□ -1.21
CCDC40-210ENST00000573903 TRGC2P03986 189 aa7.48□□□□□ -1.21
CCDC40-210ENST00000573903 PMCHL1Q16048 86 aa7.48□□□□□ -1.21
CCDC40-210ENST00000573903 PHF5AQ7RTV0 110 aaKnown RBP7.48□□□□□ -1.21
CCDC40-210ENST00000573903 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
CCDC40-210ENST00000573903 NDUFA6P56556 154 aa7.47□□□□□ -1.21
CCDC40-210ENST00000573903 PDZD11Q5EBL8 140 aa7.47□□□□□ -1.21
CCDC40-210ENST00000573903 BAGE3Q86Y29 109 aa7.47□□□□□ -1.21
CCDC40-210ENST00000573903 Q8IZM0 81 aa7.47□□□□□ -1.21
CCDC40-210ENST00000573903 DIRC1Q969H9 104 aa7.47□□□□□ -1.21
CCDC40-210ENST00000573903 CST9LQ9H4G1 147 aa7.47□□□□□ -1.21
CCDC40-210ENST00000573903 TOMM7Q9P0U1 55 aa7.47□□□□□ -1.21
CCDC40-210ENST00000573903 IGLV5-45A0A087WSX0 123 aa7.46□□□□□ -1.22
CCDC40-210ENST00000573903 TRBV30A0A0K0K1B3 111 aa7.46□□□□□ -1.22
CCDC40-210ENST00000573903 HSBP1O75506 76 aa7.46□□□□□ -1.22
CCDC40-210ENST00000573903 CKS1BP61024 79 aa7.46□□□□□ -1.22
CCDC40-210ENST00000573903 COLCA2A8K830 154 aa7.45□□□□□ -1.22
CCDC40-210ENST00000573903 H3BRM9 83 aa7.45□□□□□ -1.22
CCDC40-210ENST00000573903 ATP6V1G1O75348 118 aa7.45□□□□□ -1.22
CCDC40-210ENST00000573903 CXCL5P42830 114 aa7.45□□□□□ -1.22
CCDC40-210ENST00000573903 KIAA0087Q14695 138 aa7.45□□□□□ -1.22
CCDC40-210ENST00000573903 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
CCDC40-210ENST00000573903 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
CCDC40-210ENST00000573903 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
CCDC40-210ENST00000573903 IGLV7-43P04211 117 aa7.44□□□□□ -1.22
CCDC40-210ENST00000573903 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
CCDC40-210ENST00000573903 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
CCDC40-210ENST00000573903 FAM19A5Q7Z5A7 132 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-210ENST00000573903 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
CCDC40-210ENST00000573903 C10orf25Q5T742 122 aa7.43□□□□□ -1.22
CCDC40-210ENST00000573903 C2orf82Q6UX34 121 aa7.43□□□□□ -1.22
CCDC40-210ENST00000573903 H0Y9J4 135 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 SCO1O75880 301 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 S100A1P23297 94 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 UBE2BP63146 152 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 GAGE2EQ4V326 116 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 PRR26Q8N8Z3 221 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 COX7B2Q8TF08 81 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 GAGE2DQ9UEU5 116 aa7.42□□□□□ -1.22
CCDC40-210ENST00000573903 FAM168BA1KXE4 195 aa7.41□□□□□ -1.22
CCDC40-210ENST00000573903 NDUFC2-KCTD14E9PQ53 114 aa7.41□□□□□ -1.22
CCDC40-210ENST00000573903 F8VRH5 84 aa7.41□□□□□ -1.22
CCDC40-210ENST00000573903 M0QXV9 152 aa7.41□□□□□ -1.22
CCDC40-210ENST00000573903 SERF1AO75920 110 aa7.41□□□□□ -1.22
CCDC40-210ENST00000573903 SPINK8P0C7L1 97 aa7.41□□□□□ -1.22
CCDC40-210ENST00000573903 ZNF22P17026 224 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-210ENST00000573903 IGLV1-50A0A075B6I6 118 aa7.4□□□□□ -1.22
CCDC40-210ENST00000573903 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.22
CCDC40-210ENST00000573903 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
CCDC40-210ENST00000573903 CHTOPQ9Y3Y2 248 aaKnown RBP7.4□□□□□ -1.22
CCDC40-210ENST00000573903 LEPROTL1O95214 131 aa7.39□□□□□ -1.23
CCDC40-210ENST00000573903 TMEM170BQ5T4T1 132 aa7.39□□□□□ -1.23
CCDC40-210ENST00000573903 C11orf86A6NJI1 115 aa7.38□□□□□ -1.23
CCDC40-210ENST00000573903 LINC00310P59036 64 aa7.38□□□□□ -1.23
CCDC40-210ENST00000573903 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
CCDC40-210ENST00000573903 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
CCDC40-210ENST00000573903 RPL13AP40429 203 aaKnown RBP7.37□□□□□ -1.23
CCDC40-210ENST00000573903 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
CCDC40-210ENST00000573903 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
CCDC40-210ENST00000573903 H0Y8G0 127 aa7.36□□□□□ -1.23
CCDC40-210ENST00000573903 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
CCDC40-210ENST00000573903 FABP4P15090 132 aa7.34□□□□□ -1.23
CCDC40-210ENST00000573903 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
CCDC40-210ENST00000573903 PLNP26678 52 aa7.33□□□□□ -1.24
CCDC40-210ENST00000573903 PRR4Q16378 134 aa7.33□□□□□ -1.24
CCDC40-210ENST00000573903 C9orf129Q5T035 196 aaKnown RBP7.33□□□□□ -1.24
CCDC40-210ENST00000573903 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
CCDC40-210ENST00000573903 TMEM223A0PJW6 202 aa7.32□□□□□ -1.24
CCDC40-210ENST00000573903 NUPR1O60356 82 aa7.32□□□□□ -1.24
CCDC40-210ENST00000573903 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
CCDC40-210ENST00000573903 MAP1LC3CQ9BXW4 147 aa7.32□□□□□ -1.24
CCDC40-210ENST00000573903 XAGE1AQ9HD64 81 aa7.32□□□□□ -1.24
CCDC40-210ENST00000573903 ZNF861PO60384 105 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms