RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TINCRA0A1B0GVN0 87 aa10.64□□□□□ -0.71
SMG6-212ENST00000573153 SNAPINO95295 136 aa10.64□□□□□ -0.71
SMG6-212ENST00000573153 APOC3P02656 99 aa10.64□□□□□ -0.71
SMG6-212ENST00000573153 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
SMG6-212ENST00000573153 PACRGQ96M98 296 aaPredicted RBP10.64□□□□□ -0.71
SMG6-212ENST00000573153 GEMIN7Q9H840 131 aaKnown RBP10.64□□□□□ -0.71
SMG6-212ENST00000573153 LRP2P98164 4655 aa10.63□□□□□ -0.71
SMG6-212ENST00000573153 FAM168BA1KXE4 195 aa10.63□□□□□ -0.71
SMG6-212ENST00000573153 PRSS2P07478 247 aa10.63□□□□□ -0.71
SMG6-212ENST00000573153 NDUFA5Q16718 116 aa10.63□□□□□ -0.71
SMG6-212ENST00000573153 PHF5AQ7RTV0 110 aaKnown RBP10.63□□□□□ -0.71
SMG6-212ENST00000573153 CST9LQ9H4G1 147 aa10.63□□□□□ -0.71
SMG6-212ENST00000573153 KRTAP10-8P60410 259 aa10.62□□□□□ -0.71
SMG6-212ENST00000573153 C6orf226Q5I0X4 101 aa10.62□□□□□ -0.71
SMG6-212ENST00000573153 SMCO4Q9NRQ5 59 aa10.62□□□□□ -0.71
SMG6-212ENST00000573153 PSORS1C2Q9UIG4 136 aa10.62□□□□□ -0.71
SMG6-212ENST00000573153 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
SMG6-212ENST00000573153 TRAPPC1Q9Y5R8 145 aa10.62□□□□□ -0.71
SMG6-212ENST00000573153 CKS1BP61024 79 aa10.61□□□□□ -0.71
SMG6-212ENST00000573153 PMVKQ15126 192 aa10.61□□□□□ -0.71
SMG6-212ENST00000573153 C18orf32Q8TCD1 76 aa10.61□□□□□ -0.71
SMG6-212ENST00000573153 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
SMG6-212ENST00000573153 A0A096LNJ9 63 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 SMIM1B2RUZ4 78 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 CXCL5P42830 114 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 PDZD11Q5EBL8 140 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 LINC00469Q8N7U9 141 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 YPEL4Q96NS1 127 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 TOMM7Q9P0U1 55 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
SMG6-212ENST00000573153 F8VRH5 84 aa10.59□□□□□ -0.71
SMG6-212ENST00000573153 C9orf129Q5T035 196 aaKnown RBP10.59□□□□□ -0.71
SMG6-212ENST00000573153 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
SMG6-212ENST00000573153 LINC00614P0C842 121 aa10.58□□□□□ -0.72
SMG6-212ENST00000573153 FAM19A5Q7Z5A7 132 aaPredicted RBP10.57□□□□□ -0.72
SMG6-212ENST00000573153 HBDP02042 147 aa10.55□□□□□ -0.72
SMG6-212ENST00000573153 IGLC3P0DOY3 106 aa10.55□□□□□ -0.72
SMG6-212ENST00000573153 RAB5BP61020 215 aa10.55□□□□□ -0.72
SMG6-212ENST00000573153 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
SMG6-212ENST00000573153 M0QXV9 152 aa10.54□□□□□ -0.72
SMG6-212ENST00000573153 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
SMG6-212ENST00000573153 H3BRM9 83 aa10.52□□□□□ -0.73
SMG6-212ENST00000573153 IGLV7-43P04211 117 aa10.52□□□□□ -0.73
SMG6-212ENST00000573153 IGLV5-39A0A0G2JS06 123 aa10.51□□□□□ -0.73
SMG6-212ENST00000573153 ATP5LO75964 103 aa10.51□□□□□ -0.73
SMG6-212ENST00000573153 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
SMG6-212ENST00000573153 TP73-AS1Q9UF72 201 aa10.5□□□□□ -0.73
SMG6-212ENST00000573153 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
SMG6-212ENST00000573153 PMCHL1Q16048 86 aa10.49□□□□□ -0.73
SMG6-212ENST00000573153 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
SMG6-212ENST00000573153 CHCHD1Q96BP2 118 aaKnown RBP10.49□□□□□ -0.73
SMG6-212ENST00000573153 XAGE1AQ9HD64 81 aa10.49□□□□□ -0.73
SMG6-212ENST00000573153 UBE2BP63146 152 aa10.48□□□□□ -0.73
SMG6-212ENST00000573153 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
SMG6-212ENST00000573153 KRTAP1-4P0C5Y4 121 aa10.47□□□□□ -0.73
SMG6-212ENST00000573153 H0Y9J4 135 aa10.46□□□□□ -0.73
SMG6-212ENST00000573153 NDUFA6P56556 154 aa10.46□□□□□ -0.73
SMG6-212ENST00000573153 LBHQ53QV2 105 aaPredicted RBP10.46□□□□□ -0.73
SMG6-212ENST00000573153 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
SMG6-212ENST00000573153 IGLV5-37A0A075B6J1 123 aa10.44□□□□□ -0.74
SMG6-212ENST00000573153 TRAV12-1A0A0B4J245 112 aa10.44□□□□□ -0.74
SMG6-212ENST00000573153 C11orf86A6NJI1 115 aa10.44□□□□□ -0.74
SMG6-212ENST00000573153 NUPR1O60356 82 aa10.44□□□□□ -0.74
SMG6-212ENST00000573153 BAGE3Q86Y29 109 aa10.44□□□□□ -0.74
SMG6-212ENST00000573153 RNF213Q63HN8 5207 aa10.44□□□□□ -0.74
SMG6-212ENST00000573153 MRPL55Q7Z7F7 128 aaKnown RBP10.43□□□□□ -0.74
SMG6-212ENST00000573153 SFTA2Q6UW10 78 aa10.42□□□□□ -0.74
SMG6-212ENST00000573153 COX17Q14061 63 aa10.41□□□□□ -0.74
SMG6-212ENST00000573153 IFI27L1Q96BM0 104 aa10.41□□□□□ -0.74
SMG6-212ENST00000573153 LPAP08519 4548 aa10.41□□□□□ -0.74
SMG6-212ENST00000573153 PRR26Q8N8Z3 221 aa10.4□□□□□ -0.74
SMG6-212ENST00000573153 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
SMG6-212ENST00000573153 ZNF861PO60384 105 aa10.39□□□□□ -0.75
SMG6-212ENST00000573153 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
SMG6-212ENST00000573153 ZNF625Q96I27 306 aaPredicted RBP10.39□□□□□ -0.75
SMG6-212ENST00000573153 TRGC2P03986 189 aa10.38□□□□□ -0.75
SMG6-212ENST00000573153 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
SMG6-212ENST00000573153 ERG28Q9UKR5 140 aa10.38□□□□□ -0.75
SMG6-212ENST00000573153 IGLV1-50A0A075B6I6 118 aa10.37□□□□□ -0.75
SMG6-212ENST00000573153 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
SMG6-212ENST00000573153 HSBP1O75506 76 aa10.37□□□□□ -0.75
SMG6-212ENST00000573153 SLC7A5P1Q8MH63 180 aa10.37□□□□□ -0.75
SMG6-212ENST00000573153 BCE1O60756 84 aa10.36□□□□□ -0.75
SMG6-212ENST00000573153 PFN2P35080 140 aa10.35□□□□□ -0.75
SMG6-212ENST00000573153 LINC00310P59036 64 aa10.35□□□□□ -0.75
SMG6-212ENST00000573153 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
SMG6-212ENST00000573153 COLCA2A8K830 154 aa10.34□□□□□ -0.75
SMG6-212ENST00000573153 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
SMG6-212ENST00000573153 NKAPP1Q8N9T2 125 aa10.34□□□□□ -0.75
SMG6-212ENST00000573153 VPREB1P12018 145 aa10.33□□□□□ -0.76
SMG6-212ENST00000573153 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
SMG6-212ENST00000573153 SERF1AO75920 110 aa10.32□□□□□ -0.76
SMG6-212ENST00000573153 RPL28P46779 137 aaKnown RBP10.32□□□□□ -0.76
SMG6-212ENST00000573153 KRTAP13-1Q8IUC0 172 aa10.31□□□□□ -0.76
SMG6-212ENST00000573153 Q8NDZ9 215 aa10.31□□□□□ -0.76
SMG6-212ENST00000573153 GAGE10A6NGK3 116 aa10.3□□□□□ -0.76
SMG6-212ENST00000573153 LEPROTL1O95214 131 aa10.3□□□□□ -0.76
SMG6-212ENST00000573153 RPL13AP40429 203 aaKnown RBP10.3□□□□□ -0.76
SMG6-212ENST00000573153 RPL24P83731 157 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms