RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 C6orf226Q5I0X4 101 aa7.79□□□□□ -1.16
RPAIN-212ENST00000573126 DEFB121Q5J5C9 76 aa7.79□□□□□ -1.16
RPAIN-212ENST00000573126 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
RPAIN-212ENST00000573126 TRACP01848 142 aa7.79□□□□□ -1.16
RPAIN-212ENST00000573126 BAALC-AS2P0C853 105 aa7.79□□□□□ -1.16
RPAIN-212ENST00000573126 DEFB135Q30KP9 77 aa7.79□□□□□ -1.16
RPAIN-212ENST00000573126 PRO0255Q9UI72 69 aa7.79□□□□□ -1.16
RPAIN-212ENST00000573126 IBA57-AS1B1ANH7 110 aa7.78□□□□□ -1.16
RPAIN-212ENST00000573126 ATRQ13535 2644 aa7.78□□□□□ -1.16
RPAIN-212ENST00000573126 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
RPAIN-212ENST00000573126 SMIM11BQ8TCY0 68 aa7.78□□□□□ -1.16
RPAIN-212ENST00000573126 FAM240AA0A1B0GVK7 77 aa7.77□□□□□ -1.17
RPAIN-212ENST00000573126 PAX4O43316 350 aa7.77□□□□□ -1.17
RPAIN-212ENST00000573126 LY6G6DO95868 133 aa7.77□□□□□ -1.17
RPAIN-212ENST00000573126 Q8N3U1 123 aa7.77□□□□□ -1.17
RPAIN-212ENST00000573126 PPDPFQ9H3Y8 114 aa7.77□□□□□ -1.17
RPAIN-212ENST00000573126 C22orf24Q9Y442 160 aa7.77□□□□□ -1.17
RPAIN-212ENST00000573126 NSD1Q96L73 2696 aaPredicted RBP7.77□□□□□ -1.17
RPAIN-212ENST00000573126 A0A087WYN8 130 aa7.76□□□□□ -1.17
RPAIN-212ENST00000573126 SS18Q15532 418 aa7.76□□□□□ -1.17
RPAIN-212ENST00000573126 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
RPAIN-212ENST00000573126 OR13C6PQ8NH95 151 aa7.76□□□□□ -1.17
RPAIN-212ENST00000573126 IGLV10-54A0A075B6I4 117 aa7.75□□□□□ -1.17
RPAIN-212ENST00000573126 A0A1B0GUV1 79 aa7.75□□□□□ -1.17
RPAIN-212ENST00000573126 NHLRC4P0CG21 123 aaPredicted RBP7.75□□□□□ -1.17
RPAIN-212ENST00000573126 CFAP161Q6P656 301 aa7.75□□□□□ -1.17
RPAIN-212ENST00000573126 ATP5G1P05496 136 aa7.75□□□□□ -1.17
RPAIN-212ENST00000573126 LINC00269Q8N2A0 174 aa7.75□□□□□ -1.17
RPAIN-212ENST00000573126 INAFM1C9JVW0 142 aa7.74□□□□□ -1.17
RPAIN-212ENST00000573126 SMIM9A6NGZ8 99 aa7.74□□□□□ -1.17
RPAIN-212ENST00000573126 DNAL4O96015 105 aa7.73□□□□□ -1.17
RPAIN-212ENST00000573126 MALP21145 153 aa7.73□□□□□ -1.17
RPAIN-212ENST00000573126 IGHV4-28A0A0C4DH34 117 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 ANGP03950 147 aaKnown RBP7.72□□□□□ -1.17
RPAIN-212ENST00000573126 C9orf66Q5T8R8 295 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 Q6Q795 121 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 Q8IZM0 81 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 SMCR5Q8TEV8 140 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 LYRM9A8MSI8 78 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 CELA1Q9UNI1 258 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 LECT2O14960 151 aa7.72□□□□□ -1.17
RPAIN-212ENST00000573126 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
RPAIN-212ENST00000573126 MRPL23Q16540 153 aaKnown RBP7.72□□□□□ -1.17
RPAIN-212ENST00000573126 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
RPAIN-212ENST00000573126 HTN3P15516 51 aa7.71□□□□□ -1.18
RPAIN-212ENST00000573126 DAD1P61803 113 aa7.71□□□□□ -1.18
RPAIN-212ENST00000573126 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
RPAIN-212ENST00000573126 GAGE2AQ6NT46 116 aa7.71□□□□□ -1.18
RPAIN-212ENST00000573126 ACYP1P07311 99 aa7.7□□□□□ -1.18
RPAIN-212ENST00000573126 REG3AQ06141 175 aa7.7□□□□□ -1.18
RPAIN-212ENST00000573126 C9orf116Q5BN46 136 aaPredicted RBP7.7□□□□□ -1.18
RPAIN-212ENST00000573126 HIVEP1P15822 2718 aa7.7□□□□□ -1.18
RPAIN-212ENST00000573126 SLPIP03973 132 aa7.7□□□□□ -1.18
RPAIN-212ENST00000573126 CD164L2Q6UWJ8 174 aa7.7□□□□□ -1.18
RPAIN-212ENST00000573126 TEP1Q99973 2627 aaKnown RBP7.7□□□□□ -1.18
RPAIN-212ENST00000573126 H0YGX0 51 aa7.69□□□□□ -1.18
RPAIN-212ENST00000573126 INAFM2P0DMQ5 153 aa7.69□□□□□ -1.18
RPAIN-212ENST00000573126 APOC4P55056 127 aa7.69□□□□□ -1.18
RPAIN-212ENST00000573126 KIAA0087Q14695 138 aa7.69□□□□□ -1.18
RPAIN-212ENST00000573126 B5MCH6 92 aa7.68□□□□□ -1.18
RPAIN-212ENST00000573126 C14orf132Q9NPU4 83 aa7.68□□□□□ -1.18
RPAIN-212ENST00000573126 TRBV7-7A0A0K0K1E9 115 aa7.68□□□□□ -1.18
RPAIN-212ENST00000573126 CCDC179H3BU77 68 aa7.68□□□□□ -1.18
RPAIN-212ENST00000573126 Q8NAQ8 132 aa7.68□□□□□ -1.18
RPAIN-212ENST00000573126 LINC00526Q96FQ7 95 aa7.67□□□□□ -1.18
RPAIN-212ENST00000573126 LINC00643Q86TS7 51 aa7.66□□□□□ -1.18
RPAIN-212ENST00000573126 NCR3O14931 201 aa7.65□□□□□ -1.18
RPAIN-212ENST00000573126 NANOS2P60321 138 aaKnown RBP7.65□□□□□ -1.18
RPAIN-212ENST00000573126 FAM236AA0A1B0GUQ0 79 aa7.65□□□□□ -1.18
RPAIN-212ENST00000573126 FAM236BA0A1B0GV22 79 aa7.65□□□□□ -1.18
RPAIN-212ENST00000573126 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.18
RPAIN-212ENST00000573126 C6orf223Q8N319 242 aa7.65□□□□□ -1.18
RPAIN-212ENST00000573126 Q8NDZ9 215 aa7.65□□□□□ -1.19
RPAIN-212ENST00000573126 SS18L2Q9UHA2 77 aa7.65□□□□□ -1.19
RPAIN-212ENST00000573126 IGHV4-30-4P0DP06 118 aa7.64□□□□□ -1.19
RPAIN-212ENST00000573126 MIFP14174 115 aa7.64□□□□□ -1.19
RPAIN-212ENST00000573126 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
RPAIN-212ENST00000573126 SDIM1Q6ZPB5 146 aa7.64□□□□□ -1.19
RPAIN-212ENST00000573126 SPART-AS1P0CW21 52 aa7.64□□□□□ -1.19
RPAIN-212ENST00000573126 CXCL5P42830 114 aa7.64□□□□□ -1.19
RPAIN-212ENST00000573126 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
RPAIN-212ENST00000573126 KLK12Q9UKR0 248 aa7.63□□□□□ -1.19
RPAIN-212ENST00000573126 COX17Q14061 63 aa7.63□□□□□ -1.19
RPAIN-212ENST00000573126 ORMDL1Q9P0S3 153 aa7.63□□□□□ -1.19
RPAIN-212ENST00000573126 CYSRT1A8MQ03 144 aa7.62□□□□□ -1.19
RPAIN-212ENST00000573126 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
RPAIN-212ENST00000573126 IMUPQ9GZP8 106 aa7.62□□□□□ -1.19
RPAIN-212ENST00000573126 TMEM126AQ9H061 195 aa7.62□□□□□ -1.19
RPAIN-212ENST00000573126 LELP1Q5T871 98 aa7.61□□□□□ -1.19
RPAIN-212ENST00000573126 OBSCN-AS1Q96MR7 158 aa7.61□□□□□ -1.19
RPAIN-212ENST00000573126 NDUFC2O95298 119 aa7.61□□□□□ -1.19
RPAIN-212ENST00000573126 C6orf99Q4VX62 202 aa7.61□□□□□ -1.19
RPAIN-212ENST00000573126 KLK5Q9Y337 293 aaPredicted RBP7.61□□□□□ -1.19
RPAIN-212ENST00000573126 Q8N814 137 aa7.6□□□□□ -1.19
RPAIN-212ENST00000573126 LINC00846Q9NV44 126 aa7.6□□□□□ -1.19
RPAIN-212ENST00000573126 PKD1L1Q8TDX9 2849 aa7.6□□□□□ -1.19
RPAIN-212ENST00000573126 S100A7L2Q5SY68 101 aa7.59□□□□□ -1.19
RPAIN-212ENST00000573126 ENHOQ6UWT2 76 aa7.59□□□□□ -1.19
RPAIN-212ENST00000573126 PRR34Q9NV39 138 aa7.58□□□□□ -1.2
RPAIN-212ENST00000573126 C3orf56Q8N813 242 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms