RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 PDZD11Q5EBL8 140 aa6.42□□□□□ -1.38
GTF3C1-213ENST00000571886 LOC107984640A0A0U1RRK4 108 aa6.41□□□□□ -1.38
GTF3C1-213ENST00000571886 Q6ZN92 141 aa6.41□□□□□ -1.38
GTF3C1-213ENST00000571886 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
GTF3C1-213ENST00000571886 SCGB3A1Q96QR1 104 aa6.41□□□□□ -1.38
GTF3C1-213ENST00000571886 TIMM17AQ99595 171 aa6.41□□□□□ -1.38
GTF3C1-213ENST00000571886 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
GTF3C1-213ENST00000571886 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
GTF3C1-213ENST00000571886 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 TSTD3H0UI37 97 aa6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 NPSP0C0P6 89 aa6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 RNF151Q2KHN1 245 aa6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 ERASQ7Z444 233 aa6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 C18orf32Q8TCD1 76 aa6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
GTF3C1-213ENST00000571886 A0A096LNJ9 63 aa6.39□□□□□ -1.39
GTF3C1-213ENST00000571886 KRTAP29-1A8MX34 341 aaPredicted RBP6.39□□□□□ -1.39
GTF3C1-213ENST00000571886 NUPR1O60356 82 aa6.39□□□□□ -1.39
GTF3C1-213ENST00000571886 RPL18AQ02543 176 aaKnown RBP6.39□□□□□ -1.39
GTF3C1-213ENST00000571886 FA2HQ7L5A8 372 aa6.39□□□□□ -1.39
GTF3C1-213ENST00000571886 LINC01561Q8N1V8 128 aa6.39□□□□□ -1.39
GTF3C1-213ENST00000571886 CDKN2A-AS1Q9UH64 79 aa6.39□□□□□ -1.39
GTF3C1-213ENST00000571886 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 NDUFA1O15239 70 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 G0S2P27469 103 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 PMCHL1Q16048 86 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 LBHQ53QV2 105 aaPredicted RBP6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 Q6ZRP5 223 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 LINC00474Q9P2X8 69 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 PKIGQ9Y2B9 76 aa6.38□□□□□ -1.39
GTF3C1-213ENST00000571886 F8WDY8 70 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 J3QL48 77 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 SERF1AO75920 110 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 LINC00614P0C842 121 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 DDTP30046 118 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 LINC00310P59036 64 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 CST9LQ9H4G1 147 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
GTF3C1-213ENST00000571886 FAM168BA1KXE4 195 aa6.36□□□□□ -1.39
GTF3C1-213ENST00000571886 SCGB1D1O95968 90 aa6.36□□□□□ -1.39
GTF3C1-213ENST00000571886 TLX1NBP0CAT3 122 aa6.36□□□□□ -1.39
GTF3C1-213ENST00000571886 PAPPA-AS1Q5QFB9 102 aa6.36□□□□□ -1.39
GTF3C1-213ENST00000571886 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
GTF3C1-213ENST00000571886 C7orf33Q8WU49 177 aa6.36□□□□□ -1.39
GTF3C1-213ENST00000571886 GEMIN7Q9H840 131 aaKnown RBP6.36□□□□□ -1.39
GTF3C1-213ENST00000571886 HERVK_113P63121 156 aa6.35□□□□□ -1.39
GTF3C1-213ENST00000571886 PRR3P79522 188 aaKnown RBP6.35□□□□□ -1.39
GTF3C1-213ENST00000571886 PMVKQ15126 192 aa6.35□□□□□ -1.39
GTF3C1-213ENST00000571886 GAGE2EQ4V326 116 aa6.35□□□□□ -1.39
GTF3C1-213ENST00000571886 GAGE2DQ9UEU5 116 aa6.35□□□□□ -1.39
GTF3C1-213ENST00000571886 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 TINCRA0A1B0GVN0 87 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 OXTP01178 125 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 SEC11AP67812 179 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 Q8IZM0 81 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 LINC00469Q8N7U9 141 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
GTF3C1-213ENST00000571886 TRBV30A0A0K0K1B3 111 aa6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 LINC01549A6NIU2 74 aa6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 PRSS2P07478 247 aa6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 SPINK8P0C7L1 97 aa6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 C6orf226Q5I0X4 101 aa6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 C9orf129Q5T035 196 aaKnown RBP6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 CHCHD1Q96BP2 118 aaKnown RBP6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
GTF3C1-213ENST00000571886 HBDP02042 147 aa6.32□□□□□ -1.4
GTF3C1-213ENST00000571886 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
GTF3C1-213ENST00000571886 C20orf202A1L168 122 aa6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 NDUFC2-KCTD14E9PQ53 114 aa6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 IGLC3P0DOY3 106 aa6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 CKS1BP61024 79 aa6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 SRSF9Q13242 221 aaKnown RBP eCLIP6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 FAM19A5Q7Z5A7 132 aaPredicted RBP6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 MIEN1Q9BRT3 115 aa6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 PSORS1C2Q9UIG4 136 aa6.31□□□□□ -1.4
GTF3C1-213ENST00000571886 HSBP1O75506 76 aa6.3□□□□□ -1.4
GTF3C1-213ENST00000571886 ZNF22P17026 224 aaPredicted RBP6.3□□□□□ -1.4
GTF3C1-213ENST00000571886 COX7B2Q8TF08 81 aa6.3□□□□□ -1.4
GTF3C1-213ENST00000571886 C11orf86A6NJI1 115 aa6.29□□□□□ -1.4
GTF3C1-213ENST00000571886 F8VRH5 84 aa6.29□□□□□ -1.4
GTF3C1-213ENST00000571886 C3orf79P0CE67 100 aa6.29□□□□□ -1.4
GTF3C1-213ENST00000571886 SERTAD4-AS1Q5TG53 156 aa6.29□□□□□ -1.4
GTF3C1-213ENST00000571886 FAM19A2Q8N3H0 131 aa6.29□□□□□ -1.4
GTF3C1-213ENST00000571886 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
GTF3C1-213ENST00000571886 XAGE1AQ9HD64 81 aa6.29□□□□□ -1.4
GTF3C1-213ENST00000571886 M0R143 59 aa6.28□□□□□ -1.4
GTF3C1-213ENST00000571886 ATP5LO75964 103 aa6.28□□□□□ -1.4
GTF3C1-213ENST00000571886 KRTDAPP60985 99 aa6.28□□□□□ -1.4
GTF3C1-213ENST00000571886 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
GTF3C1-213ENST00000571886 IGLV5-39A0A0G2JS06 123 aa6.27□□□□□ -1.41
GTF3C1-213ENST00000571886 M0QXV9 152 aa6.27□□□□□ -1.41
GTF3C1-213ENST00000571886 CXCL5P42830 114 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms