RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 NDUFA1O15239 70 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 KRTAP10-2P60368 255 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 MIAQ16674 131 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 LINC01561Q8N1V8 128 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 UPK3BQ9BT76 320 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 TOMM7Q9P0U1 55 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 A0A0J9YXY3 114 aa6.54□□□□□ -1.36
RBFOX1-220ENST00000570188 BVES-AS1Q5T3Y7 98 aa6.54□□□□□ -1.36
RBFOX1-220ENST00000570188 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
RBFOX1-220ENST00000570188 C10orf126Q8N4M7 172 aa6.54□□□□□ -1.36
RBFOX1-220ENST00000570188 HIST1H4GQ99525 98 aa6.54□□□□□ -1.36
RBFOX1-220ENST00000570188 TAL2Q16559 108 aa6.53□□□□□ -1.36
RBFOX1-220ENST00000570188 Q8N1X5 172 aa6.53□□□□□ -1.36
RBFOX1-220ENST00000570188 Q9H8V8 135 aa6.53□□□□□ -1.36
RBFOX1-220ENST00000570188 TMEM238C9JI98 176 aa6.52□□□□□ -1.37
RBFOX1-220ENST00000570188 PRSS2P07478 247 aa6.52□□□□□ -1.37
RBFOX1-220ENST00000570188 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
RBFOX1-220ENST00000570188 CEND1Q8N111 149 aa6.52□□□□□ -1.37
RBFOX1-220ENST00000570188 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
RBFOX1-220ENST00000570188 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
RBFOX1-220ENST00000570188 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
RBFOX1-220ENST00000570188 APOMO95445 188 aa6.51□□□□□ -1.37
RBFOX1-220ENST00000570188 HERV-K104P63124 156 aa6.51□□□□□ -1.37
RBFOX1-220ENST00000570188 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
RBFOX1-220ENST00000570188 Q8IZM0 81 aa6.51□□□□□ -1.37
RBFOX1-220ENST00000570188 Q9HAA7 133 aa6.51□□□□□ -1.37
RBFOX1-220ENST00000570188 DNAH7Q8WXX0 4024 aa6.51□□□□□ -1.37
RBFOX1-220ENST00000570188 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
RBFOX1-220ENST00000570188 IBA57-AS1B1ANH7 110 aa6.5□□□□□ -1.37
RBFOX1-220ENST00000570188 TIMM17BO60830 172 aa6.5□□□□□ -1.37
RBFOX1-220ENST00000570188 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
RBFOX1-220ENST00000570188 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
RBFOX1-220ENST00000570188 DNAH1Q9P2D7 4330 aa6.5□□□□□ -1.37
RBFOX1-220ENST00000570188 FXYD2P54710 66 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 SPAG11BQ08648 103 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 CIRBPQ14011 172 aaKnown RBP6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 C6orf226Q5I0X4 101 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 KRTAP26-1Q6PEX3 210 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 SFTA2Q6UW10 78 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 RMI2Q96E14 147 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 LITAFQ99732 161 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
RBFOX1-220ENST00000570188 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
RBFOX1-220ENST00000570188 A6NDN8 102 aa6.48□□□□□ -1.37
RBFOX1-220ENST00000570188 CXCL5P42830 114 aa6.48□□□□□ -1.37
RBFOX1-220ENST00000570188 CKS1BP61024 79 aa6.48□□□□□ -1.37
RBFOX1-220ENST00000570188 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
RBFOX1-220ENST00000570188 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
RBFOX1-220ENST00000570188 A0A0U1RRA0 63 aa6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 K7EP13 123 aa6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 SMIM13P0DJ93 91 aa6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 KIAA0087Q14695 138 aa6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 MUC7Q8TAX7 377 aa6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 NHP2Q9NX24 153 aaKnown RBP6.47□□□□□ -1.37
RBFOX1-220ENST00000570188 NPC2P61916 151 aa6.46□□□□□ -1.38
RBFOX1-220ENST00000570188 C2orf82Q6UX34 121 aa6.46□□□□□ -1.38
RBFOX1-220ENST00000570188 Q6ZVH6 145 aa6.46□□□□□ -1.38
RBFOX1-220ENST00000570188 DAND5Q8N907 189 aa6.46□□□□□ -1.38
RBFOX1-220ENST00000570188 CSMD3Q7Z407 3707 aa6.46□□□□□ -1.38
RBFOX1-220ENST00000570188 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.38
RBFOX1-220ENST00000570188 K7ERJ3 54 aa6.45□□□□□ -1.38
RBFOX1-220ENST00000570188 RPL24P83731 157 aaKnown RBP6.45□□□□□ -1.38
RBFOX1-220ENST00000570188 HIGD2BQ4VC39 106 aa6.45□□□□□ -1.38
RBFOX1-220ENST00000570188 MUSTN1Q8IVN3 82 aa6.45□□□□□ -1.38
RBFOX1-220ENST00000570188 KRTAP1-5Q9BYS1 174 aa6.45□□□□□ -1.38
RBFOX1-220ENST00000570188 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
RBFOX1-220ENST00000570188 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 FBN3Q75N90 2809 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 IFITM1P13164 125 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 PFN2P35080 140 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 LINC00158P58513 81 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 TTC32Q5I0X7 151 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 C6orf223Q8N319 242 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
RBFOX1-220ENST00000570188 GVQW2A0A096LPI5 108 aaPredicted RBP6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 A4D1N5 150 aa6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 TAX1BP3O14907 124 aa6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 MIR7-3HGQ8N6C7 128 aa6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 LINC00308Q8TCZ7 52 aa6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 NTN5Q8WTR8 489 aaPredicted RBP6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 COPS9Q8WXC6 57 aa6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 RAB37Q96AX2 223 aa6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
RBFOX1-220ENST00000570188 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 NBDYA0A0U1RRE5 68 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 A0A1B0GV90 55 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 A0A1B0GWB2 263 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 CASC10Q5T4H9 136 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
RBFOX1-220ENST00000570188 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
RBFOX1-220ENST00000570188 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
RBFOX1-220ENST00000570188 SOSTDC1Q6X4U4 206 aa6.41□□□□□ -1.38
RBFOX1-220ENST00000570188 C2orf48Q96LS8 159 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms