RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 PAPPA-AS1Q5QFB9 102 aa5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 CST9LQ9H4G1 147 aa5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 A0A096LNJ9 63 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 FAM168BA1KXE4 195 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 LINC01546A6NGU7 62 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 HBDP02042 147 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 CKS1BP61024 79 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 HERVK_113P63121 156 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 CIRBPQ14011 172 aaKnown RBP5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 KIAA0087Q14695 138 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 PMVKQ15126 192 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 BAGE3Q86Y29 109 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 FAM19A2Q8N3H0 131 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 PLAC8Q9NZF1 115 aa5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 FLG2Q5D862 2391 aaPredicted RBP5.68□□□□□ -1.5
GTF3C1-210ENST00000569394 H0Y8G0 127 aa5.67□□□□□ -1.5
GTF3C1-210ENST00000569394 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
GTF3C1-210ENST00000569394 RAB5BP61020 215 aa5.67□□□□□ -1.5
GTF3C1-210ENST00000569394 HERC1Q15751 4861 aa5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 B5MCH6 92 aa5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 NPSP0C0P6 89 aa5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 Q6ZRP5 223 aa5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 FAM19A5Q7Z5A7 132 aaPredicted RBP5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 MRPL35Q9NZE8 188 aaKnown RBP5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
GTF3C1-210ENST00000569394 TINCRA0A1B0GVN0 87 aa5.65□□□□□ -1.5
GTF3C1-210ENST00000569394 HSBP1O75506 76 aa5.65□□□□□ -1.5
GTF3C1-210ENST00000569394 SEC11AP67812 179 aa5.65□□□□□ -1.5
GTF3C1-210ENST00000569394 PKIGQ9Y2B9 76 aa5.65□□□□□ -1.5
GTF3C1-210ENST00000569394 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.51
GTF3C1-210ENST00000569394 SRRM2Q9UQ35 2752 aaKnown RBP5.65□□□□□ -1.51
GTF3C1-210ENST00000569394 SMIM1B2RUZ4 78 aa5.64□□□□□ -1.51
GTF3C1-210ENST00000569394 PDZD11Q5EBL8 140 aa5.64□□□□□ -1.51
GTF3C1-210ENST00000569394 FAM19A3Q7Z5A8 133 aa5.64□□□□□ -1.51
GTF3C1-210ENST00000569394 COX7B2Q8TF08 81 aa5.64□□□□□ -1.51
GTF3C1-210ENST00000569394 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
GTF3C1-210ENST00000569394 TRBV30A0A0K0K1B3 111 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 LINC01549A6NIU2 74 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 COLCA2A8K830 154 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 ATP5LO75964 103 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 TMEM170BQ5T4T1 132 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 Q8IZM0 81 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 LINC01561Q8N1V8 128 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 CHCHD1Q96BP2 118 aaKnown RBP5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 CHTOPQ9Y3Y2 248 aaKnown RBP5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
GTF3C1-210ENST00000569394 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 F8WDY8 70 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 H3BRM9 83 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 NUPR1O60356 82 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 SERF1AO75920 110 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 IGLC3P0DOY3 106 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 FABP4P15090 132 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 PRR3P79522 188 aaKnown RBP5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 C9orf129Q5T035 196 aaKnown RBP5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 IFI27L1Q96BM0 104 aa5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 ZNF625Q96I27 306 aaPredicted RBP5.62□□□□□ -1.51
GTF3C1-210ENST00000569394 NDUFC2-KCTD14E9PQ53 114 aa5.61□□□□□ -1.51
GTF3C1-210ENST00000569394 F8VRH5 84 aa5.61□□□□□ -1.51
GTF3C1-210ENST00000569394 PFN2P35080 140 aa5.61□□□□□ -1.51
GTF3C1-210ENST00000569394 LINC00310P59036 64 aa5.61□□□□□ -1.51
GTF3C1-210ENST00000569394 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 A0A0U1RRA0 63 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 M0QXV9 152 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 TLX1NBP0CAT3 122 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 UBE2BP63146 152 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 SERTAD4-AS1Q5TG53 156 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 KRTAP11-1Q8IUC1 163 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 PMCHL2Q9BQD1 86 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
GTF3C1-210ENST00000569394 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
GTF3C1-210ENST00000569394 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
GTF3C1-210ENST00000569394 GAGE10A6NGK3 116 aa5.57□□□□□ -1.52
GTF3C1-210ENST00000569394 CXCL5P42830 114 aa5.57□□□□□ -1.52
GTF3C1-210ENST00000569394 RPL37AP8A6NKH3 93 aa5.56□□□□□ -1.52
GTF3C1-210ENST00000569394 KRTAP29-1A8MX34 341 aaPredicted RBP5.56□□□□□ -1.52
GTF3C1-210ENST00000569394 C22orf24Q9Y442 160 aa5.56□□□□□ -1.52
GTF3C1-210ENST00000569394 TRAV12-1A0A0B4J245 112 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 IGLV5-39A0A0G2JS06 123 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 TMEM223A0PJW6 202 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BKO60814 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BJP06899 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BOP23527 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BBP33778 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BDP58876 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BCP62807 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST2H2BEQ16778 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BHQ93079 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BNQ99877 126 aa5.55□□□□□ -1.52
GTF3C1-210ENST00000569394 HIST1H2BMQ99879 126 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms