RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 EFNA4P52798 201 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 RPL38P63173 70 aaKnown RBP1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 UNQ9165/PRO28630Q6UXU0 137 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 SDIM1Q6ZPB5 146 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 MIR17HGQ75NE6 70 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 FAM19A3Q7Z5A8 133 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 WFDC5Q8TCV5 224 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 ZC2HC1AQ96GY0 325 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 SCGB3A1Q96QR1 104 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 FGF23Q9GZV9 251 aaPredicted RBP1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 C8orf17Q9NRJ1 99 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 TMEM167BQ9NRX6 74 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 TP73-AS1Q9UF72 201 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC00588Q9Y4M8 146 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 EML6Q6ZMW3 1958 aa1.88□□□□□ -2.11
HERPUD1-212ENST00000567944 VPS13CQ709C8 3753 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 TRBV7-3A0A075B6L6 115 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 IGHV1-45A0A0A0MS14 117 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 A0A0D9SEW6 157 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 TRBV30A0A0K0K1B3 111 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 A0A1W2PQD3 144 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 ZNF815PA8K554 130 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 E7EQL1 145 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 FSTL3O95633 263 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 DNAL4O96015 105 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 CCL4P13236 92 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 CR1P17927 2039 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 RPL27AP46776 148 aaKnown RBP1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 UBE2D1P51668 147 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 ANK2Q01484 3957 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 SS18Q15532 418 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 RNASE13Q5GAN3 156 aaKnown RBP1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 FP248Q71RG6 208 aaPredicted RBP1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 CLECL1Q8IZS7 167 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 Q8N2B8 174 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 MIR7-3HGQ8N6C7 128 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 CLEC2BQ92478 149 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 TMEM141Q96I45 108 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 WFDC6Q9BQY6 131 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 LIMD2Q9BT23 127 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 V9GYV3 84 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 NCKAP5O14513 1909 aa1.87□□□□□ -2.11
HERPUD1-212ENST00000567944 CUBNO60494 3623 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 TMSB15BA0A087X1C1 80 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 TRBV7-1A0A0A6YYK4 115 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 CXorf51AA0A1B0GTR3 108 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 C19orf71A6NCJ1 209 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 IQCF6A8MYZ5 107 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 BUB1B-PAK6H3BSN5 160 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 LTAP01374 205 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 IGLV3-25P01717 112 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 SLC25A16P16260 332 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC00313P59037 77 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 ZNF818PQ6ZRF7 136 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 VMO1Q7Z5L0 202 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 GPHB5Q86YW7 130 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 PHLDA3Q9Y5J5 127 aa1.86□□□□□ -2.11
HERPUD1-212ENST00000567944 PRKDCP78527 4128 aaKnown RBP1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 MED12LQ86YW9 2145 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 TEX49A0A1B0GTD5 131 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 TMEM30CPA0ZSE6 113 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 C3orf84H3BNL1 204 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 H7BZZ5 65 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 EDDM3BP56851 147 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 FGF12P61328 243 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 SUPT4H1P63272 117 aaKnown RBP1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 DEFB133Q30KQ1 61 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 ORMDL3Q8N138 153 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 C20orf197Q8N268 126 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC00269Q8N2A0 174 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 FAM167A-AS1Q96KT0 104 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 ZNF706Q9Y5V0 76 aaPredicted RBP1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 WNK2Q9Y3S1 2297 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 SVEP1Q4LDE5 3571 aa1.85□□□□□ -2.11
HERPUD1-212ENST00000567944 NINQ8N4C6 2090 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 IGLV3-32A0A0A0MS00 114 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 IGKV1D-43A0A0B4J1Z2 117 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 TRAV12-1A0A0B4J245 112 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 IGKV1-9A0A0C4DH69 117 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 K7EMI3 77 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 K7ERS5 55 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 MIFP14174 115 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 RNASE4P34096 147 aaKnown RBP1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 DEFB109BQ30KR1 87 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 SOSTDC1Q6X4U4 206 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 CASC2Q6XLA1 102 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 PRNTQ86SH4 94 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 DYNAPQ8N1N2 210 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC00337Q8N6G1 96 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 LINC00304Q8N9R0 145 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 ST20-AS1Q8NBB2 130 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 ITLN2Q8WWU7 325 aaPredicted RBP1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 NABP2Q9BQ15 211 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 PSENENQ9NZ42 101 aa1.84□□□□□ -2.11
HERPUD1-212ENST00000567944 TENM1Q9UKZ4 2725 aa1.84□□□□□ -2.12
HERPUD1-212ENST00000567944 NBEAL2Q6ZNJ1 2754 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV3-72A0A0B4J1Y9 119 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 hDV103S1A0JD37 113 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms