RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 CXCL6P80162 114 aa17.31■□□□□ 0.36
FANCA-221ENST00000566889 PDE6GP18545 87 aa17.3■□□□□ 0.36
FANCA-221ENST00000566889 PRR3P79522 188 aaKnown RBP17.3■□□□□ 0.36
FANCA-221ENST00000566889 PLAC8L1A1L4L8 177 aa17.29■□□□□ 0.36
FANCA-221ENST00000566889 Q6ZVQ6 151 aa17.29■□□□□ 0.36
FANCA-221ENST00000566889 ATP5EP56381 51 aaPredicted RBP17.28■□□□□ 0.36
FANCA-221ENST00000566889 C6orf99Q4VX62 202 aa17.28■□□□□ 0.36
FANCA-221ENST00000566889 KHDC1LQ5JSQ8 128 aa17.28■□□□□ 0.36
FANCA-221ENST00000566889 H3BQ85 93 aa17.27■□□□□ 0.36
FANCA-221ENST00000566889 HAMPP81172 84 aa17.27■□□□□ 0.35
FANCA-221ENST00000566889 C16orf95Q9H693 158 aa17.27■□□□□ 0.35
FANCA-221ENST00000566889 TRAV10A0A0B4J240 114 aa17.26■□□□□ 0.35
FANCA-221ENST00000566889 F8WEM9 126 aa17.25■□□□□ 0.35
FANCA-221ENST00000566889 LAMTOR3Q9UHA4 124 aa17.25■□□□□ 0.35
FANCA-221ENST00000566889 RMI2Q96E14 147 aa17.25■□□□□ 0.35
FANCA-221ENST00000566889 SNURFQ9Y675 71 aa17.24■□□□□ 0.35
FANCA-221ENST00000566889 CSPG4Q6UVK1 2322 aa17.24■□□□□ 0.35
FANCA-221ENST00000566889 C9orf66Q5T8R8 295 aa17.24■□□□□ 0.35
FANCA-221ENST00000566889 FP248Q71RG6 208 aaPredicted RBP17.24■□□□□ 0.35
FANCA-221ENST00000566889 COL12A1Q99715 3063 aa17.23■□□□□ 0.35
FANCA-221ENST00000566889 A0A1B0GUV1 79 aa17.23■□□□□ 0.35
FANCA-221ENST00000566889 VPS13CQ709C8 3753 aa17.22■□□□□ 0.35
FANCA-221ENST00000566889 ATRXP46100 2492 aa17.22■□□□□ 0.35
FANCA-221ENST00000566889 FSHBP01225 129 aa17.21■□□□□ 0.35
FANCA-221ENST00000566889 IGHV4-28A0A0C4DH34 117 aa17.2■□□□□ 0.34
FANCA-221ENST00000566889 GIG44P09565 113 aaPredicted RBP17.2■□□□□ 0.34
FANCA-221ENST00000566889 CMC4P56277 68 aaPredicted RBP17.2■□□□□ 0.34
FANCA-221ENST00000566889 CRYBG3Q68DQ2 2970 aa17.19■□□□□ 0.34
FANCA-221ENST00000566889 GNLYP22749 145 aa17.19■□□□□ 0.34
FANCA-221ENST00000566889 M0R2N4 97 aa17.18■□□□□ 0.34
FANCA-221ENST00000566889 KIAA0087Q14695 138 aa17.18■□□□□ 0.34
FANCA-221ENST00000566889 TRBV7-6A0A0J9YX20 115 aa17.17■□□□□ 0.34
FANCA-221ENST00000566889 Q8N3U1 123 aa17.17■□□□□ 0.34
FANCA-221ENST00000566889 TRBV7-4A0A0J9YYF1 115 aa17.16■□□□□ 0.34
FANCA-221ENST00000566889 C1orf43Q9BWL3 253 aa17.16■□□□□ 0.34
FANCA-221ENST00000566889 MUC7Q8TAX7 377 aa17.14■□□□□ 0.33
FANCA-221ENST00000566889 MIFP14174 115 aa17.13■□□□□ 0.33
FANCA-221ENST00000566889 MUC6Q6W4X9 2439 aa17.12■□□□□ 0.33
FANCA-221ENST00000566889 CD164L2Q6UWJ8 174 aa17.12■□□□□ 0.33
FANCA-221ENST00000566889 ERC2-IT1O76042 136 aa17.11■□□□□ 0.33
FANCA-221ENST00000566889 ZNF843Q8N446 348 aa17.11■□□□□ 0.33
FANCA-221ENST00000566889 TM2D3Q9BRN9 247 aa17.11■□□□□ 0.33
FANCA-221ENST00000566889 Q8NDZ9 215 aa17.1■□□□□ 0.33
FANCA-221ENST00000566889 C2CD3Q4AC94 2353 aa17.09■□□□□ 0.33
FANCA-221ENST00000566889 CSNK1G2-AS1Q8NCQ2 148 aa17.09■□□□□ 0.33
FANCA-221ENST00000566889 Q6ZQY7 126 aa17.08■□□□□ 0.33
FANCA-221ENST00000566889 PLA2G2AP14555 144 aa17.08■□□□□ 0.32
FANCA-221ENST00000566889 CLPSL2Q6UWE3 100 aa17.08■□□□□ 0.32
FANCA-221ENST00000566889 SPATA3Q8NHX4 192 aa17.08■□□□□ 0.32
FANCA-221ENST00000566889 IGLV6-57P01721 117 aa17.06■□□□□ 0.32
FANCA-221ENST00000566889 NREPQ16612 68 aa17.06■□□□□ 0.32
FANCA-221ENST00000566889 C9orf116Q5BN46 136 aaPredicted RBP17.06■□□□□ 0.32
FANCA-221ENST00000566889 WFDC11Q8NEX6 87 aa17.06■□□□□ 0.32
FANCA-221ENST00000566889 RPL35AP18077 110 aaKnown RBP17.05■□□□□ 0.32
FANCA-221ENST00000566889 GYPEP15421 78 aa17.05■□□□□ 0.32
FANCA-221ENST00000566889 LINC00474Q9P2X8 69 aa17.05■□□□□ 0.32
FANCA-221ENST00000566889 TMEM254Q8TBM7 123 aa17.04■□□□□ 0.32
FANCA-221ENST00000566889 LINC00269Q8N2A0 174 aa17.03■□□□□ 0.32
FANCA-221ENST00000566889 IGF2RP11717 2491 aa17.03■□□□□ 0.32
FANCA-221ENST00000566889 CCL24O00175 119 aa17.02■□□□□ 0.32
FANCA-221ENST00000566889 MAPK1IP1LQ8NDC0 245 aa17.02■□□□□ 0.32
FANCA-221ENST00000566889 CHCHD10Q8WYQ3 142 aaPredicted RBP17.02■□□□□ 0.32
FANCA-221ENST00000566889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.01■□□□□ 0.31
FANCA-221ENST00000566889 BPY2O14599 106 aa17■□□□□ 0.31
FANCA-221ENST00000566889 PKIGQ9Y2B9 76 aa16.99■□□□□ 0.31
FANCA-221ENST00000566889 F8WDY8 70 aa16.98■□□□□ 0.31
FANCA-221ENST00000566889 IGHV4-31P0DP07 118 aa16.98■□□□□ 0.31
FANCA-221ENST00000566889 LINC00612Q8N6U2 182 aa16.98■□□□□ 0.31
FANCA-221ENST00000566889 SCXQ7RTU7 201 aa16.97■□□□□ 0.31
FANCA-221ENST00000566889 DEFB130BP0DP73 79 aa16.96■□□□□ 0.31
FANCA-221ENST00000566889 DEFB130AP0DP74 79 aa16.96■□□□□ 0.31
FANCA-221ENST00000566889 DIRC1Q969H9 104 aa16.96■□□□□ 0.31
FANCA-221ENST00000566889 WFDC10AQ9H1F0 79 aa16.96■□□□□ 0.31
FANCA-221ENST00000566889 C19orf73Q9NVV2 129 aa16.96■□□□□ 0.31
FANCA-221ENST00000566889 BRK1Q8WUW1 75 aa16.96■□□□□ 0.3
FANCA-221ENST00000566889 NOTCH3Q9UM47 2321 aa16.95■□□□□ 0.3
FANCA-221ENST00000566889 A0A0J9YWU9 116 aa16.94■□□□□ 0.3
FANCA-221ENST00000566889 IGHV4-30-4P0DP06 118 aa16.94■□□□□ 0.3
FANCA-221ENST00000566889 PRO0255Q9UI72 69 aa16.93■□□□□ 0.3
FANCA-221ENST00000566889 SPG11Q96JI7 2443 aa16.93■□□□□ 0.3
FANCA-221ENST00000566889 REG3AQ06141 175 aa16.93■□□□□ 0.3
FANCA-221ENST00000566889 LINC01006Q8NI28 216 aa16.93■□□□□ 0.3
FANCA-221ENST00000566889 CELSR2Q9HCU4 2923 aa16.92■□□□□ 0.3
FANCA-221ENST00000566889 COX7BP24311 80 aa16.92■□□□□ 0.3
FANCA-221ENST00000566889 IGLV10-54A0A075B6I4 117 aa16.9■□□□□ 0.3
FANCA-221ENST00000566889 PRYO14603 147 aa16.9■□□□□ 0.3
FANCA-221ENST00000566889 UNQ6190/PRO20217Q6UXQ8 127 aa16.9■□□□□ 0.3
FANCA-221ENST00000566889 MAP1AP78559 2803 aaPredicted RBP16.9■□□□□ 0.3
FANCA-221ENST00000566889 A0A0U1RQV1 116 aa16.9■□□□□ 0.3
FANCA-221ENST00000566889 ANGP03950 147 aaKnown RBP16.9■□□□□ 0.3
FANCA-221ENST00000566889 SPAG11BQ08648 103 aa16.89■□□□□ 0.29
FANCA-221ENST00000566889 C10orf25Q5T742 122 aa16.89■□□□□ 0.29
FANCA-221ENST00000566889 OCR1Q9BZK8 76 aa16.87■□□□□ 0.29
FANCA-221ENST00000566889 IGLV1-51P01701 117 aa16.86■□□□□ 0.29
FANCA-221ENST00000566889 ESRGQ1W209 222 aa16.86■□□□□ 0.29
FANCA-221ENST00000566889 ZNF73O43830 326 aaPredicted RBP16.86■□□□□ 0.29
FANCA-221ENST00000566889 ELOF1P60002 83 aaKnown RBP16.86■□□□□ 0.29
FANCA-221ENST00000566889 C1orf195Q5TG92 126 aa16.86■□□□□ 0.29
FANCA-221ENST00000566889 A0A096LPF7 62 aa16.85■□□□□ 0.29
FANCA-221ENST00000566889 CR1P17927 2039 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms