RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TRGV2A0A075B6R0 118 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 PVALEFA0A1B0GWK0 134 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 JMJD7-PLA2G4BH0Y9G9 81 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 NUPR1O60356 82 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 RNASE3P12724 160 aaKnown RBP1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 UBA52P62987 128 aaKnown RBP1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 Q6ZRN7 208 aaPredicted RBP1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 IFI27L1Q96BM0 104 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 TMEM106BQ9NUM4 274 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 TMEM14CQ9P0S9 112 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 AP4S1Q9Y587 144 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 ASCC3Q8N3C0 2202 aaKnown RBP1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 PLXNA4Q9HCM2 1894 aa1.64□□□□□ -2.15
HERPUD1-211ENST00000566550 BSNQ9UPA5 3926 aa1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 TNRC6AQ8NDV7 1962 aaKnown RBP1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 TMEM262E9PQX1 116 aa1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 CCKP06307 115 aa1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 MPV17LQ2QL34 196 aa1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 C10orf82Q8WW14 230 aa1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 DPH3P1Q9H4G8 78 aa1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
HERPUD1-211ENST00000566550 ZANQ9Y493 2812 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 MDC1Q14676 2089 aaKnown RBP1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 TRAV12-3A0A0B4J271 114 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 TRBV10-1A0A0K0K1A3 114 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 CXorf51AA0A1B0GTR3 108 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 RBAKDNA6NC62 111 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 NUPR2A6NF83 97 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 DCDP81605 110 aaKnown RBP1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 LINC00299Q6ZSB3 139 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 C5orf38Q86SI9 138 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 ZNF625Q96I27 306 aaPredicted RBP1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 DPY30Q9C005 99 aa1.62□□□□□ -2.15
HERPUD1-211ENST00000566550 TET1Q8NFU7 2136 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 MCM3APO60318 1980 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 KIAA1549LQ6ZVL6 1849 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 PLXNA2O75051 1894 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 ABCA13Q86UQ4 5058 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 A0A0J9YY99 117 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 UBE2L5PA0A1B0GUS4 154 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 HCG22E2RYF7 251 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 GNGT2O14610 69 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 IGLV3-1P01715 115 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 UBE2L3P68036 154 aaKnown RBP1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 DMAC1Q96GE9 116 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 VAMP8Q9BV40 100 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 SIPA1L3O60292 1781 aaPredicted RBP1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 HIVEP2P31629 2446 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 MUC2Q02817 5179 aa1.61□□□□□ -2.15
HERPUD1-211ENST00000566550 GOLGA4Q13439 2230 aaKnown RBP1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 ARFGEF3Q5TH69 2177 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 IGKV3-7A0A075B6H7 116 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 TRAV13-2A0A0B4J235 113 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 TRBV10-3A0A0K0K1G6 114 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 MT-ATP8P03928 68 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 LINC00032P0C843 101 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 COX6B1P14854 86 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 GNG11P61952 73 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 SBSPONQ8IVN8 264 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 C4orf33Q8N1A6 199 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 ODF3Q96PU9 254 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 V9GYS6 101 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 VPS13CQ709C8 3753 aa1.6□□□□□ -2.15
HERPUD1-211ENST00000566550 TRBV6-7A0A0A0MS04 114 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 LOC101927531A0A1B0GV80 90 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 SSSCA1O60232 199 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 FXYD4P59646 89 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 SPATA45Q537H7 98 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 LINC00322Q6ZN03 302 aaPredicted RBP1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 CYP2G1PQ6ZSU1 146 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 COMMD6Q7Z4G1 85 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 MYOZ3Q8TDC0 251 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 LINC00474Q9P2X8 69 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 C22orf24Q9Y442 160 aa1.59□□□□□ -2.15
HERPUD1-211ENST00000566550 MAP1AP78559 2803 aaPredicted RBP1.59□□□□□ -2.16
HERPUD1-211ENST00000566550 ZNF469Q96JG9 3925 aaPredicted RBP1.59□□□□□ -2.16
HERPUD1-211ENST00000566550 TENM3Q9P273 2699 aa1.59□□□□□ -2.16
HERPUD1-211ENST00000566550 SVEP1Q4LDE5 3571 aa1.59□□□□□ -2.16
HERPUD1-211ENST00000566550 PTPRDP23468 1912 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 TENM2Q9NT68 2774 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 IGLV3-32A0A0A0MS00 114 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 HIGD1CA8MV81 97 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 IGHV3-30P01768 117 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 IGHV3-30-5P0DP03 117 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 PDE6GP18545 87 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 ATP5EP56381 51 aaPredicted RBP1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 C10orf128Q5T292 105 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 TSLPQ969D9 159 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 PRO1933Q9H354 126 aa1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 PRKDCP78527 4128 aaKnown RBP1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 MYO18AQ92614 2054 aaKnown RBP1.58□□□□□ -2.16
HERPUD1-211ENST00000566550 SNRNP200O75643 2136 aaKnown RBP1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 ESPL1Q14674 2120 aa1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 INE1O15225 51 aa1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 RPL37AP61513 92 aaKnown RBP1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 PMCHL2Q9BQD1 86 aa1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 LINC00312Q9Y6C7 94 aa1.57□□□□□ -2.16
HERPUD1-211ENST00000566550 HERC1Q15751 4861 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms