RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 FAM19A5Q7Z5A7 132 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-213ENST00000565173 C18orf32Q8TCD1 76 aa5.17□□□□□ -1.58
CAPN3-213ENST00000565173 PYGO1Q9Y3Y4 419 aa5.17□□□□□ -1.58
CAPN3-213ENST00000565173 G0S2P27469 103 aa5.16□□□□□ -1.58
CAPN3-213ENST00000565173 GAGE2EQ4V326 116 aa5.16□□□□□ -1.58
CAPN3-213ENST00000565173 C9orf129Q5T035 196 aaKnown RBP5.16□□□□□ -1.58
CAPN3-213ENST00000565173 C2orf82Q6UX34 121 aa5.16□□□□□ -1.58
CAPN3-213ENST00000565173 GAGE2DQ9UEU5 116 aa5.16□□□□□ -1.58
CAPN3-213ENST00000565173 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
CAPN3-213ENST00000565173 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.59
CAPN3-213ENST00000565173 LINC00614P0C842 121 aa5.15□□□□□ -1.59
CAPN3-213ENST00000565173 UBE2D1P51668 147 aa5.15□□□□□ -1.59
CAPN3-213ENST00000565173 RAB5BP61020 215 aa5.15□□□□□ -1.59
CAPN3-213ENST00000565173 URB1-AS1Q96HZ7 61 aa5.15□□□□□ -1.59
CAPN3-213ENST00000565173 IGLV1-50A0A075B6I6 118 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 LINC01546A6NGU7 62 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 M0QXV9 152 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 ZC2HC1BQ5TFG8 222 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 Q6ZN92 141 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 LINC00173Q6ZV60 143 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 BAGE3Q86Y29 109 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 LINC01561Q8N1V8 128 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 TOMM6Q96B49 74 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 TMEM141Q96I45 108 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 SCGB3A1Q96QR1 104 aa5.14□□□□□ -1.59
CAPN3-213ENST00000565173 LINC01549A6NIU2 74 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 IGIPA6NJ69 53 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 HBDP02042 147 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 PMCHL1Q16048 86 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 PAPPA-AS1Q5QFB9 102 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 TEX43Q6ZNM6 134 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 ERASQ7Z444 233 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 AMELXQ99217 191 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 TIMM17AQ99595 171 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 C2orf88Q9BSF0 95 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 VCX2Q9H322 139 aa5.13□□□□□ -1.59
CAPN3-213ENST00000565173 NPSP0C0P6 89 aa5.12□□□□□ -1.59
CAPN3-213ENST00000565173 FAM19A3Q7Z5A8 133 aa5.12□□□□□ -1.59
CAPN3-213ENST00000565173 CHCHD1Q96BP2 118 aaKnown RBP5.12□□□□□ -1.59
CAPN3-213ENST00000565173 A0A096LNJ9 63 aa5.11□□□□□ -1.59
CAPN3-213ENST00000565173 ZNF861PO60384 105 aa5.11□□□□□ -1.59
CAPN3-213ENST00000565173 HSBP1O75506 76 aa5.11□□□□□ -1.59
CAPN3-213ENST00000565173 UBE2BP63146 152 aa5.11□□□□□ -1.59
CAPN3-213ENST00000565173 PACRGQ96M98 296 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-213ENST00000565173 C22orf24Q9Y442 160 aa5.11□□□□□ -1.59
CAPN3-213ENST00000565173 SERF1AO75920 110 aa5.1□□□□□ -1.59
CAPN3-213ENST00000565173 NDUFA6P56556 154 aa5.1□□□□□ -1.59
CAPN3-213ENST00000565173 Q8IZM0 81 aa5.1□□□□□ -1.59
CAPN3-213ENST00000565173 LINC00469Q8N7U9 141 aa5.1□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BKO60814 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 ATP5LO75964 103 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BJP06899 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BOP23527 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BBP33778 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 RPL13AP40429 203 aaKnown RBP5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BDP58876 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BCP62807 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST2H2BEQ16778 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 PDZD11Q5EBL8 140 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 C6orf226Q5I0X4 101 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-213ENST00000565173 FAM19A2Q8N3H0 131 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BHQ93079 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BNQ99877 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 HIST1H2BMQ99879 126 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 XAGE1AQ9HD64 81 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 TOMM7Q9P0U1 55 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 CDKN2A-AS1Q9UH64 79 aa5.09□□□□□ -1.59
CAPN3-213ENST00000565173 PRSS2P07478 247 aa5.08□□□□□ -1.6
CAPN3-213ENST00000565173 LINC00310P59036 64 aa5.08□□□□□ -1.6
CAPN3-213ENST00000565173 CKS1BP61024 79 aa5.08□□□□□ -1.6
CAPN3-213ENST00000565173 SEC11AP67812 179 aa5.08□□□□□ -1.6
CAPN3-213ENST00000565173 PMVKQ15126 192 aa5.08□□□□□ -1.6
CAPN3-213ENST00000565173 PRR4Q16378 134 aa5.08□□□□□ -1.6
CAPN3-213ENST00000565173 CST9LQ9H4G1 147 aa5.08□□□□□ -1.6
CAPN3-213ENST00000565173 GEMIN7Q9H840 131 aaKnown RBP5.08□□□□□ -1.6
CAPN3-213ENST00000565173 F8VRH5 84 aa5.07□□□□□ -1.6
CAPN3-213ENST00000565173 NUPR1O60356 82 aa5.07□□□□□ -1.6
CAPN3-213ENST00000565173 HERVK_113P63121 156 aa5.07□□□□□ -1.6
CAPN3-213ENST00000565173 LBHQ53QV2 105 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-213ENST00000565173 IFI27L1Q96BM0 104 aa5.07□□□□□ -1.6
CAPN3-213ENST00000565173 TP73-AS1Q9UF72 201 aa5.07□□□□□ -1.6
CAPN3-213ENST00000565173 A0A087X002 238 aa5.06□□□□□ -1.6
CAPN3-213ENST00000565173 BCE1O60756 84 aa5.06□□□□□ -1.6
CAPN3-213ENST00000565173 LEPROTL1O95214 131 aa5.06□□□□□ -1.6
CAPN3-213ENST00000565173 FABP4P15090 132 aa5.06□□□□□ -1.6
CAPN3-213ENST00000565173 MRPL55Q7Z7F7 128 aaKnown RBP5.06□□□□□ -1.6
CAPN3-213ENST00000565173 TINCRA0A1B0GVN0 87 aa5.05□□□□□ -1.6
CAPN3-213ENST00000565173 H0Y8G0 127 aa5.05□□□□□ -1.6
CAPN3-213ENST00000565173 HSPB8Q9UJY1 196 aa5.05□□□□□ -1.6
CAPN3-213ENST00000565173 MUC17Q685J3 4493 aa5.04□□□□□ -1.6
CAPN3-213ENST00000565173 SMIM1B2RUZ4 78 aa5.04□□□□□ -1.6
CAPN3-213ENST00000565173 TSPAN13O95857 204 aa5.04□□□□□ -1.6
CAPN3-213ENST00000565173 LINC00167Q96N53 147 aa5.04□□□□□ -1.6
CAPN3-213ENST00000565173 CHTOPQ9Y3Y2 248 aaKnown RBP5.04□□□□□ -1.6
CAPN3-213ENST00000565173 IGLV5-45A0A087WSX0 123 aa5.03□□□□□ -1.6
CAPN3-213ENST00000565173 TRAV12-1A0A0B4J245 112 aa5.03□□□□□ -1.6
CAPN3-213ENST00000565173 RPL37AP8A6NKH3 93 aa5.03□□□□□ -1.6
CAPN3-213ENST00000565173 H3BRM9 83 aa5.03□□□□□ -1.6
CAPN3-213ENST00000565173 IGLC3P0DOY3 106 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms