RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 A4D1N5 150 aa13.15□□□□□ -0.3
CLN6-205ENST00000564846 KIAA0087Q14695 138 aa13.15□□□□□ -0.3
CLN6-205ENST00000564846 CFAP161Q6P656 301 aa13.15□□□□□ -0.3
CLN6-205ENST00000564846 IBA57-AS1B1ANH7 110 aa13.15□□□□□ -0.31
CLN6-205ENST00000564846 CKS1BP61024 79 aa13.15□□□□□ -0.31
CLN6-205ENST00000564846 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.14□□□□□ -0.31
CLN6-205ENST00000564846 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
CLN6-205ENST00000564846 CFC1P0CG37 223 aa13.14□□□□□ -0.31
CLN6-205ENST00000564846 DAND5Q8N907 189 aa13.14□□□□□ -0.31
CLN6-205ENST00000564846 APLNQ9ULZ1 77 aa13.14□□□□□ -0.31
CLN6-205ENST00000564846 NUPR2A6NF83 97 aa13.13□□□□□ -0.31
CLN6-205ENST00000564846 KRTAP26-1Q6PEX3 210 aa13.13□□□□□ -0.31
CLN6-205ENST00000564846 C1orf43Q9BWL3 253 aa13.13□□□□□ -0.31
CLN6-205ENST00000564846 A0A0U1RRA0 63 aa13.12□□□□□ -0.31
CLN6-205ENST00000564846 H3BUT2 72 aa13.12□□□□□ -0.31
CLN6-205ENST00000564846 LINC00308Q8TCZ7 52 aa13.12□□□□□ -0.31
CLN6-205ENST00000564846 MEGF8Q7Z7M0 2845 aa13.12□□□□□ -0.31
CLN6-205ENST00000564846 PPDPFQ9H3Y8 114 aa13.12□□□□□ -0.31
CLN6-205ENST00000564846 SPAG11BQ08648 103 aa13.11□□□□□ -0.31
CLN6-205ENST00000564846 PRKDCP78527 4128 aaKnown RBP13.1□□□□□ -0.31
CLN6-205ENST00000564846 A0A0B4J2C4 111 aa13.1□□□□□ -0.31
CLN6-205ENST00000564846 NPC2P61916 151 aa13.1□□□□□ -0.31
CLN6-205ENST00000564846 VAMP3Q15836 100 aa13.1□□□□□ -0.31
CLN6-205ENST00000564846 C2orf82Q6UX34 121 aa13.1□□□□□ -0.31
CLN6-205ENST00000564846 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
CLN6-205ENST00000564846 LINC00158P58513 81 aa13.09□□□□□ -0.31
CLN6-205ENST00000564846 IGKV2D-24A0A075B6R9 120 aa13.09□□□□□ -0.31
CLN6-205ENST00000564846 DYNC2H1Q8NCM8 4307 aaKnown RBP13.08□□□□□ -0.32
CLN6-205ENST00000564846 MIR7-3HGQ8N6C7 128 aa13.08□□□□□ -0.32
CLN6-205ENST00000564846 NAA38Q9BRA0 125 aaKnown RBP13.08□□□□□ -0.32
CLN6-205ENST00000564846 PRO1854Q9UHT4 67 aa13.08□□□□□ -0.32
CLN6-205ENST00000564846 A0A1W2PPM0 123 aa13.07□□□□□ -0.32
CLN6-205ENST00000564846 EIF4EBP3O60516 100 aaPredicted RBP13.07□□□□□ -0.32
CLN6-205ENST00000564846 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
CLN6-205ENST00000564846 PFN2P35080 140 aa13.06□□□□□ -0.32
CLN6-205ENST00000564846 COX17Q14061 63 aa13.06□□□□□ -0.32
CLN6-205ENST00000564846 Q9HAA7 133 aa13.06□□□□□ -0.32
CLN6-205ENST00000564846 FABP2P12104 132 aa13.05□□□□□ -0.32
CLN6-205ENST00000564846 SOSTDC1Q6X4U4 206 aa13.05□□□□□ -0.32
CLN6-205ENST00000564846 UBE2DNLQ8IWF7 75 aa13.05□□□□□ -0.32
CLN6-205ENST00000564846 RMI2Q96E14 147 aa13.04□□□□□ -0.32
CLN6-205ENST00000564846 TSPAN13O95857 204 aa13.03□□□□□ -0.32
CLN6-205ENST00000564846 UBE2V1Q13404 147 aa13.03□□□□□ -0.32
CLN6-205ENST00000564846 C6orf223Q8N319 242 aa13.03□□□□□ -0.32
CLN6-205ENST00000564846 NTN5Q8WTR8 489 aaPredicted RBP13.03□□□□□ -0.32
CLN6-205ENST00000564846 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.32
CLN6-205ENST00000564846 UNQ6190/PRO20217Q6UXQ8 127 aa13.02□□□□□ -0.33
CLN6-205ENST00000564846 C15orf56Q8N910 161 aa13.01□□□□□ -0.33
CLN6-205ENST00000564846 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
CLN6-205ENST00000564846 GVQW2A0A096LPI5 108 aaPredicted RBP13□□□□□ -0.33
CLN6-205ENST00000564846 GTF2H5Q6ZYL4 71 aa13□□□□□ -0.33
CLN6-205ENST00000564846 GAGE10A6NGK3 116 aa12.99□□□□□ -0.33
CLN6-205ENST00000564846 C10orf25Q5T742 122 aa12.99□□□□□ -0.33
CLN6-205ENST00000564846 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
CLN6-205ENST00000564846 SPCS1Q9Y6A9 102 aa12.99□□□□□ -0.33
CLN6-205ENST00000564846 K7EP34 96 aa12.99□□□□□ -0.33
CLN6-205ENST00000564846 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
CLN6-205ENST00000564846 C2orf48Q96LS8 159 aa12.99□□□□□ -0.33
CLN6-205ENST00000564846 F8WDY8 70 aa12.98□□□□□ -0.33
CLN6-205ENST00000564846 SND1-IT1Q9HBX3 110 aa12.98□□□□□ -0.33
CLN6-205ENST00000564846 DNAH7Q8WXX0 4024 aa12.98□□□□□ -0.33
CLN6-205ENST00000564846 LOC107984156A0A0G2JMH3 177 aa12.97□□□□□ -0.33
CLN6-205ENST00000564846 C9orf116Q5BN46 136 aaPredicted RBP12.97□□□□□ -0.33
CLN6-205ENST00000564846 ARL17AQ8IVW1 177 aa12.97□□□□□ -0.33
CLN6-205ENST00000564846 CAMK2N2Q96S95 79 aa12.97□□□□□ -0.33
CLN6-205ENST00000564846 TRBV30A0A0K0K1B3 111 aa12.96□□□□□ -0.34
CLN6-205ENST00000564846 CSMD3Q7Z407 3707 aa12.96□□□□□ -0.34
CLN6-205ENST00000564846 H7C2G1 150 aa12.95□□□□□ -0.34
CLN6-205ENST00000564846 Q1RN00 199 aa12.95□□□□□ -0.34
CLN6-205ENST00000564846 LYRM7Q5U5X0 104 aa12.95□□□□□ -0.34
CLN6-205ENST00000564846 C6orf48Q9UBA6 75 aa12.94□□□□□ -0.34
CLN6-205ENST00000564846 DNAH1Q9P2D7 4330 aa12.94□□□□□ -0.34
CLN6-205ENST00000564846 RPL13AP40429 203 aaKnown RBP12.93□□□□□ -0.34
CLN6-205ENST00000564846 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
CLN6-205ENST00000564846 TRAV13-2A0A0B4J235 113 aa12.92□□□□□ -0.34
CLN6-205ENST00000564846 PSMB2P49721 201 aa12.92□□□□□ -0.34
CLN6-205ENST00000564846 PLECQ15149 4684 aaKnown RBP12.91□□□□□ -0.34
CLN6-205ENST00000564846 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.34
CLN6-205ENST00000564846 USP17L23D6RBM5 183 aa12.9□□□□□ -0.34
CLN6-205ENST00000564846 IGKV2D-28P01615 120 aa12.9□□□□□ -0.34
CLN6-205ENST00000564846 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
CLN6-205ENST00000564846 Q6ZRU5 148 aa12.9□□□□□ -0.34
CLN6-205ENST00000564846 NDUFC2O95298 119 aa12.89□□□□□ -0.35
CLN6-205ENST00000564846 SCGB1C2P0DMR2 95 aa12.89□□□□□ -0.35
CLN6-205ENST00000564846 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
CLN6-205ENST00000564846 SYCNQ0VAF6 134 aa12.89□□□□□ -0.35
CLN6-205ENST00000564846 LYSTQ99698 3801 aa12.88□□□□□ -0.35
CLN6-205ENST00000564846 FBN3Q75N90 2809 aa12.88□□□□□ -0.35
CLN6-205ENST00000564846 TRBV20-1A0A075B6N2 111 aa12.87□□□□□ -0.35
CLN6-205ENST00000564846 LINC00337Q8N6G1 96 aa12.87□□□□□ -0.35
CLN6-205ENST00000564846 NBDYA0A0U1RRE5 68 aa12.86□□□□□ -0.35
CLN6-205ENST00000564846 TRIAP1O43715 76 aa12.86□□□□□ -0.35
CLN6-205ENST00000564846 COX6CP09669 75 aa12.86□□□□□ -0.35
CLN6-205ENST00000564846 STARD9Q9P2P6 4700 aa12.85□□□□□ -0.35
CLN6-205ENST00000564846 NDUFC2-KCTD14E9PQ53 114 aa12.84□□□□□ -0.35
CLN6-205ENST00000564846 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
CLN6-205ENST00000564846 H3BMG7 143 aa12.83□□□□□ -0.36
CLN6-205ENST00000564846 PSCAO43653 123 aa12.83□□□□□ -0.36
CLN6-205ENST00000564846 CARD19Q96LW7 228 aa12.83□□□□□ -0.36
CLN6-205ENST00000564846 TCL1BO95988 128 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms