RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 A0A087WZ39 114 aa10.8□□□□□ -0.68
GTF3C1-205ENST00000564747 SDIM1Q6ZPB5 146 aa10.8□□□□□ -0.68
GTF3C1-205ENST00000564747 GAGE2AQ6NT46 116 aa10.8□□□□□ -0.68
GTF3C1-205ENST00000564747 SMIM11BQ8TCY0 68 aa10.8□□□□□ -0.68
GTF3C1-205ENST00000564747 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
GTF3C1-205ENST00000564747 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-205ENST00000564747 KMT2BQ9UMN6 2715 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-205ENST00000564747 A0A087WYN8 130 aa10.78□□□□□ -0.68
GTF3C1-205ENST00000564747 MALP21145 153 aa10.78□□□□□ -0.68
GTF3C1-205ENST00000564747 C9orf153Q5TBE3 101 aa10.78□□□□□ -0.68
GTF3C1-205ENST00000564747 IBA57-AS1B1ANH7 110 aa10.77□□□□□ -0.68
GTF3C1-205ENST00000564747 C3orf22Q8N5N4 141 aa10.77□□□□□ -0.69
GTF3C1-205ENST00000564747 ATP5G1P05496 136 aa10.77□□□□□ -0.69
GTF3C1-205ENST00000564747 GYPEP15421 78 aa10.77□□□□□ -0.69
GTF3C1-205ENST00000564747 CXCL5P42830 114 aa10.77□□□□□ -0.69
GTF3C1-205ENST00000564747 DNAL4O96015 105 aa10.76□□□□□ -0.69
GTF3C1-205ENST00000564747 XCL1P47992 114 aa10.76□□□□□ -0.69
GTF3C1-205ENST00000564747 UQCRQO14949 82 aa10.76□□□□□ -0.69
GTF3C1-205ENST00000564747 C6orf226Q5I0X4 101 aa10.76□□□□□ -0.69
GTF3C1-205ENST00000564747 PAX4O43316 350 aa10.75□□□□□ -0.69
GTF3C1-205ENST00000564747 A0A096LPF7 62 aa10.75□□□□□ -0.69
GTF3C1-205ENST00000564747 CLPSL2Q6UWE3 100 aa10.75□□□□□ -0.69
GTF3C1-205ENST00000564747 C9orf129Q5T035 196 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-205ENST00000564747 KIR2DL5BQ8NHK3 375 aa10.74□□□□□ -0.69
GTF3C1-205ENST00000564747 VWFP04275 2813 aa10.74□□□□□ -0.69
GTF3C1-205ENST00000564747 OR13C6PQ8NH95 151 aa10.73□□□□□ -0.69
GTF3C1-205ENST00000564747 LINC00526Q96FQ7 95 aa10.72□□□□□ -0.69
GTF3C1-205ENST00000564747 KRTAP10-3P60369 221 aa10.71□□□□□ -0.69
GTF3C1-205ENST00000564747 LINC00612Q8N6U2 182 aa10.71□□□□□ -0.69
GTF3C1-205ENST00000564747 H0YGX0 51 aa10.71□□□□□ -0.69
GTF3C1-205ENST00000564747 LECT2O14960 151 aa10.71□□□□□ -0.7
GTF3C1-205ENST00000564747 SS18Q15532 418 aa10.71□□□□□ -0.7
GTF3C1-205ENST00000564747 X6R8D5 127 aa10.71□□□□□ -0.7
GTF3C1-205ENST00000564747 HILS1P60008 231 aa10.7□□□□□ -0.7
GTF3C1-205ENST00000564747 C14orf132Q9NPU4 83 aa10.7□□□□□ -0.7
GTF3C1-205ENST00000564747 A0A1B0GUV1 79 aa10.7□□□□□ -0.7
GTF3C1-205ENST00000564747 SLPIP03973 132 aa10.69□□□□□ -0.7
GTF3C1-205ENST00000564747 COX7CP15954 63 aa10.69□□□□□ -0.7
GTF3C1-205ENST00000564747 UNC79Q9P2D8 2635 aa10.69□□□□□ -0.7
GTF3C1-205ENST00000564747 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
GTF3C1-205ENST00000564747 ATOX1O00244 68 aa10.67□□□□□ -0.7
GTF3C1-205ENST00000564747 PRR3P79522 188 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-205ENST00000564747 Q8IZM0 81 aa10.67□□□□□ -0.7
GTF3C1-205ENST00000564747 SMR3AQ99954 134 aa10.67□□□□□ -0.7
GTF3C1-205ENST00000564747 HIST1H4AP62805 103 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-205ENST00000564747 DEFB4AO15263 64 aa10.66□□□□□ -0.7
GTF3C1-205ENST00000564747 Q8N3U1 123 aa10.66□□□□□ -0.7
GTF3C1-205ENST00000564747 HIVEP2P31629 2446 aa10.66□□□□□ -0.7
GTF3C1-205ENST00000564747 LINC00269Q8N2A0 174 aa10.66□□□□□ -0.7
GTF3C1-205ENST00000564747 LINC00482Q8N8I6 264 aa10.66□□□□□ -0.7
GTF3C1-205ENST00000564747 LY6G6DO95868 133 aa10.65□□□□□ -0.7
GTF3C1-205ENST00000564747 SPATA3Q8NHX4 192 aa10.65□□□□□ -0.7
GTF3C1-205ENST00000564747 NCR3O14931 201 aa10.65□□□□□ -0.7
GTF3C1-205ENST00000564747 C2orf48Q96LS8 159 aa10.65□□□□□ -0.7
GTF3C1-205ENST00000564747 KLK5Q9Y337 293 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-205ENST00000564747 IGLV10-54A0A075B6I4 117 aa10.64□□□□□ -0.71
GTF3C1-205ENST00000564747 OBSCN-AS1Q96MR7 158 aa10.64□□□□□ -0.71
GTF3C1-205ENST00000564747 LINC00846Q9NV44 126 aa10.64□□□□□ -0.71
GTF3C1-205ENST00000564747 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
GTF3C1-205ENST00000564747 KIAA0087Q14695 138 aa10.63□□□□□ -0.71
GTF3C1-205ENST00000564747 CRYGAP11844 174 aa10.63□□□□□ -0.71
GTF3C1-205ENST00000564747 NANOS2P60321 138 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-205ENST00000564747 RPL18AQ02543 176 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-205ENST00000564747 Q6JHZ5 121 aa10.62□□□□□ -0.71
GTF3C1-205ENST00000564747 FLNBO75369 2602 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-205ENST00000564747 SMIM9A6NGZ8 99 aa10.62□□□□□ -0.71
GTF3C1-205ENST00000564747 C9orf116Q5BN46 136 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-205ENST00000564747 CFAP161Q6P656 301 aa10.61□□□□□ -0.71
GTF3C1-205ENST00000564747 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-205ENST00000564747 DEFB135Q30KP9 77 aa10.61□□□□□ -0.71
GTF3C1-205ENST00000564747 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
GTF3C1-205ENST00000564747 J3QKU1 62 aa10.6□□□□□ -0.71
GTF3C1-205ENST00000564747 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-205ENST00000564747 A0A1B0GX51 115 aa10.6□□□□□ -0.71
GTF3C1-205ENST00000564747 LINC01561Q8N1V8 128 aa10.6□□□□□ -0.71
GTF3C1-205ENST00000564747 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
GTF3C1-205ENST00000564747 hADV29S1A0JD25 119 aa10.6□□□□□ -0.71
GTF3C1-205ENST00000564747 REG3AQ06141 175 aa10.59□□□□□ -0.71
GTF3C1-205ENST00000564747 A0A087WVE0 104 aa10.59□□□□□ -0.71
GTF3C1-205ENST00000564747 LYRM9A8MSI8 78 aa10.59□□□□□ -0.71
GTF3C1-205ENST00000564747 LOC107984640A0A0U1RRK4 108 aa10.58□□□□□ -0.72
GTF3C1-205ENST00000564747 TENM1Q9UKZ4 2725 aa10.58□□□□□ -0.72
GTF3C1-205ENST00000564747 J3KT08 172 aa10.58□□□□□ -0.72
GTF3C1-205ENST00000564747 Q8NDZ9 215 aa10.57□□□□□ -0.72
GTF3C1-205ENST00000564747 COX17Q14061 63 aa10.56□□□□□ -0.72
GTF3C1-205ENST00000564747 Q8N814 137 aa10.56□□□□□ -0.72
GTF3C1-205ENST00000564747 IGHV4-28A0A0C4DH34 117 aa10.56□□□□□ -0.72
GTF3C1-205ENST00000564747 NDUFC2O95298 119 aa10.55□□□□□ -0.72
GTF3C1-205ENST00000564747 SERP2Q8N6R1 65 aa10.55□□□□□ -0.72
GTF3C1-205ENST00000564747 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
GTF3C1-205ENST00000564747 TRRAPQ9Y4A5 3859 aa10.55□□□□□ -0.72
GTF3C1-205ENST00000564747 DAD1P61803 113 aa10.55□□□□□ -0.72
GTF3C1-205ENST00000564747 LINC00167Q96N53 147 aa10.54□□□□□ -0.72
GTF3C1-205ENST00000564747 CYSTM1Q9H1C7 97 aa10.54□□□□□ -0.72
GTF3C1-205ENST00000564747 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
GTF3C1-205ENST00000564747 CCKP06307 115 aa10.54□□□□□ -0.72
GTF3C1-205ENST00000564747 C6orf223Q8N319 242 aa10.54□□□□□ -0.72
GTF3C1-205ENST00000564747 C10orf25Q5T742 122 aa10.54□□□□□ -0.72
GTF3C1-205ENST00000564747 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
GTF3C1-205ENST00000564747 C6orf99Q4VX62 202 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms