RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 DPH3P1Q9H4G8 78 aa2.39□□□□□ -2.03
CHD9-212ENST00000564641 TMEM14CQ9P0S9 112 aa2.39□□□□□ -2.03
CHD9-212ENST00000564641 TGP01266 2768 aa2.39□□□□□ -2.03
CHD9-212ENST00000564641 TANC2Q9HCD6 1990 aa2.39□□□□□ -2.03
CHD9-212ENST00000564641 TENM1Q9UKZ4 2725 aa2.39□□□□□ -2.03
CHD9-212ENST00000564641 IGKV1D-37A0A075B6S9 117 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 PLAC8L1A1L4L8 177 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 NDUFC2-KCTD14E9PQ53 114 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 J3QQQ9 107 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 OXTP01178 125 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 INSP01308 110 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
CHD9-212ENST00000564641 LGALS3P17931 250 aaKnown RBP2.38□□□□□ -2.03
CHD9-212ENST00000564641 SYNJ2BPP57105 145 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 RPL18AQ02543 176 aaKnown RBP2.38□□□□□ -2.03
CHD9-212ENST00000564641 ERCC8Q13216 396 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 MUSTN1Q8IVN3 82 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 EXOC3-AS1Q8N2X6 119 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 SERP2Q8N6R1 65 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 DEFB108BQ8NET1 73 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 COPS9Q8WXC6 57 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 METTL26Q96S19 204 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 DSCR8Q96T75 97 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 RPUSD1Q9UJJ7 312 aaKnown RBP2.38□□□□□ -2.03
CHD9-212ENST00000564641 KIAA2026Q5HYC2 2103 aa2.38□□□□□ -2.03
CHD9-212ENST00000564641 TET2Q6N021 2002 aaPredicted RBP2.37□□□□□ -2.03
CHD9-212ENST00000564641 IGLV2-18A0A075B6J9 118 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 TRBV19A0A075B6N1 114 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 SMIM26A0A096LP01 95 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 TRBV7-1A0A0A6YYK4 115 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 IGHV3OR16-9A0A0B4J2B5 98 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 FAM236DA0A1B0GTK5 79 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 IQCF6A8MYZ5 107 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 M0R3E3 92 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 LEPROTO15243 131 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 NDUFB3O43676 98 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 IGLV2-23P01705 113 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 FAM236CP0DP71 79 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 PSMB8P28062 276 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 NPC2P61916 151 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 WDR86Q86TI4 376 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 TOMM6Q96B49 74 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 SHANK2-AS3Q9BTD1 123 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 NDUFA4L2Q9NRX3 87 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 KAAG1Q9UBP8 84 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 ICOSQ9Y6W8 199 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 SERP1Q9Y6X1 66 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 DNHD1Q96M86 4753 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 TRRAPQ9Y4A5 3859 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 ARHGAP32A7KAX9 2087 aa2.37□□□□□ -2.03
CHD9-212ENST00000564641 MEGF8Q7Z7M0 2845 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 TRAV8-3A0A0A6YYJ7 113 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 IGHV1-69DA0A0B4J2H0 117 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 IGHV3-64DA0A0J9YX35 117 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 A0A0U1RQV1 116 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 TMEM223A0PJW6 202 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 C11orf86A6NJI1 115 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 KNCNA6PVL3 124 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 M0R1W7 72 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 LST1O00453 97 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 IGHV1-69P01742 117 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 TFF1P04155 84 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 UBE2E1P51965 193 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 REG3AQ06141 175 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 TMEM167AQ8TBQ9 72 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 TMEM141Q96I45 108 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 C16orf95Q9H693 158 aa2.36□□□□□ -2.03
CHD9-212ENST00000564641 IGHV3-74A0A0B4J1X5 117 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 PPP1R17O96001 155 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 SAA1P0DJI8 122 aaPredicted RBP2.35□□□□□ -2.03
CHD9-212ENST00000564641 SAA2P0DJI9 122 aaPredicted RBP2.35□□□□□ -2.03
CHD9-212ENST00000564641 HIST1H4AP62805 103 aaKnown RBP2.35□□□□□ -2.03
CHD9-212ENST00000564641 MRPS36P82909 103 aaKnown RBP2.35□□□□□ -2.03
CHD9-212ENST00000564641 RHOHQ15669 191 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 DEFB112Q30KQ8 113 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 VMA21Q3ZAQ7 101 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 SPANXN1Q5VSR9 72 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 BRD3OSQ6XYD6 125 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 SDIM1Q6ZPB5 146 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 ZNF826PQ6ZT77 177 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 LINC00311Q8N616 119 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 FAM216BQ8N7L0 139 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 DCANP1Q8TF63 244 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 LEAP2Q969E1 77 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 UPK3BQ9BT76 320 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 TMEM243Q9BU79 118 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 SMIM2Q9BVW6 85 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 MRPL36Q9P0J6 103 aaKnown RBP2.35□□□□□ -2.03
CHD9-212ENST00000564641 ZNRD1Q9P1U0 126 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 TP53TG1Q9Y2A0 90 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 VWFP04275 2813 aa2.35□□□□□ -2.03
CHD9-212ENST00000564641 IGLV11-55A0A075B6I3 123 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 IGHV3-21A0A0B4J1V1 117 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 IGHV3-66A0A0C4DH42 116 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 LY6LH3BQJ8 138 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 H3BRN7 92 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 I3L3M4 83 aa2.34□□□□□ -2.03
CHD9-212ENST00000564641 PLXNB1O43157 2135 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms