RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 CCL25O15444 150 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 PFDN1O60925 122 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 TRGC1P0CF51 173 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 BCL2P10415 239 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 FGF6P10767 208 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 DEFA1P59665 94 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 SS18Q15532 418 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 C9orf116Q5BN46 136 aaPredicted RBP3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 RPL7L1Q6DKI1 246 aaKnown RBP3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 C2orf66Q6UXQ4 117 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 PHF5AQ7RTV0 110 aaKnown RBP3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 GATD1Q8NB37 220 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 OR2D3Q8NGH3 330 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 S100ZQ8WXG8 99 aa3.57□□□□□ -1.84
AP000842.3-201ENST00000564354 IGLV4-69A0A075B6H9 119 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 IGLV8-61A0A075B6I0 122 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 APCSP02743 223 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 RPS20P60866 119 aaKnown RBP3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 OR5A1Q8NGJ0 315 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 CAMK2N2Q96S95 79 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 MARVELD1Q9BSK0 173 aa3.56□□□□□ -1.84
AP000842.3-201ENST00000564354 A0A1B0GV50 99 aa3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 F2Z2F3 143 aa3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 APOMO95445 188 aa3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 NCR2O95944 276 aa3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 NTF3P20783 257 aa3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 EIF5AL1Q6IS14 154 aaKnown RBP3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 TSKUQ8WUA8 353 aa3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 MAP1LC3AQ9H492 121 aa3.55□□□□□ -1.84
AP000842.3-201ENST00000564354 FXYD6-FXYD2A0A087WZ82 144 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 A0A1B0GXF2 115 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 IFNA1P01562 189 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 ZNF25P17030 456 aaPredicted RBP3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 UBE2BP63146 152 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 LYZL1Q6UWQ5 148 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 SMIM15Q7Z3B0 74 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 SFT2D1Q8WV19 159 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 MED28Q9H204 178 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 ALG5Q9Y673 324 aa3.54□□□□□ -1.84
AP000842.3-201ENST00000564354 COX7A2LO14548 114 aa3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 IGLC6P0CF74 106 aa3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 RPL35P42766 123 aaKnown RBP3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 FAM231DQ6ZW35 169 aa3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 KCNRGQ8N5I3 272 aa3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 NUP35Q8NFH5 326 aa3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 FAM213BQ8TBF2 198 aa3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 RPL39LQ96EH5 51 aaKnown RBP3.53□□□□□ -1.84
AP000842.3-201ENST00000564354 SDHAF1A6NFY7 115 aa3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 C1orf196B1AJZ1 125 aa3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 I3L3M4 83 aa3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 IFITM3Q01628 133 aa3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 MEF2BQ02080 365 aaPredicted RBP3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 Q5BKY6 102 aa3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 MUC2Q02817 5179 aa3.52□□□□□ -1.85
AP000842.3-201ENST00000564354 TRAV13-1A0A0B4J241 112 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 FAM168BA1KXE4 195 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 C19orf71A6NCJ1 209 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 PSPHP1O15172 72 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 TCAPO15273 167 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 CTRLP40313 264 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 SPAG11BQ08648 103 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 CENPWQ5EE01 88 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 TEX261Q6UWH6 196 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 LINC00299Q6ZSB3 139 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 C5orf38Q86SI9 138 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 FAM104AQ969W3 186 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 IMMP2LQ96T52 175 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 BIN3Q9NQY0 253 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 CDC42SE2Q9NRR3 84 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 ANAPC11Q9NYG5 84 aa3.51□□□□□ -1.85
AP000842.3-201ENST00000564354 NDUFS5O43920 106 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 GIPP09681 153 aaPredicted RBP3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 ESDP10768 282 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 GNG4P50150 75 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 C9orf62Q8N4C0 152 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 LINC00337Q8N6G1 96 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 SMIM12Q96EX1 92 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 ST20Q9HBF5 79 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 TMEM242Q9NWH2 141 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 GNG13Q9P2W3 67 aa3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 CARHSP1Q9Y2V2 147 aaKnown RBP3.5□□□□□ -1.85
AP000842.3-201ENST00000564354 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 SMIM26A0A096LP01 95 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 C7orf77A4D0Y5 90 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 UMAD1C9J7I0 102 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 NDUFA1O15239 70 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 ARPC5O15511 151 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 SERF1AO75920 110 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 FCER1GP30273 86 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 SMAGPQ0VAQ4 97 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 RNASE13Q5GAN3 156 aaKnown RBP3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 COA6Q5JTJ3 125 aaKnown RBP3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 ORAOV1Q8WV07 137 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 MBD3L1Q8WWY6 194 aa3.49□□□□□ -1.85
AP000842.3-201ENST00000564354 TGIF2-C20orf24A0A0A6YYL0 155 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms