RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 DAND5Q8N907 189 aa12.5□□□□□ -0.41
GDE1-203ENST00000564172 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
GDE1-203ENST00000564172 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
GDE1-203ENST00000564172 MUSTN1Q8IVN3 82 aa12.49□□□□□ -0.41
GDE1-203ENST00000564172 PRB2P02812 416 aaPredicted RBP12.49□□□□□ -0.41
GDE1-203ENST00000564172 NPC2P61916 151 aa12.49□□□□□ -0.41
GDE1-203ENST00000564172 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
GDE1-203ENST00000564172 DEFB104AQ8WTQ1 72 aa12.48□□□□□ -0.41
GDE1-203ENST00000564172 NBEAL1Q6ZS30 2694 aa12.48□□□□□ -0.41
GDE1-203ENST00000564172 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
GDE1-203ENST00000564172 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
GDE1-203ENST00000564172 KPRPQ5T749 579 aaPredicted RBP12.47□□□□□ -0.41
GDE1-203ENST00000564172 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
GDE1-203ENST00000564172 SERP1Q9Y6X1 66 aa12.47□□□□□ -0.41
GDE1-203ENST00000564172 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
GDE1-203ENST00000564172 TIMM21Q9BVV7 248 aa12.47□□□□□ -0.41
GDE1-203ENST00000564172 TSPEAR-AS2P59090 65 aa12.46□□□□□ -0.41
GDE1-203ENST00000564172 C2orf66Q6UXQ4 117 aa12.46□□□□□ -0.41
GDE1-203ENST00000564172 I3L3M4 83 aa12.46□□□□□ -0.42
GDE1-203ENST00000564172 FAM236DA0A1B0GTK5 79 aa12.45□□□□□ -0.42
GDE1-203ENST00000564172 K7EQD1 137 aa12.45□□□□□ -0.42
GDE1-203ENST00000564172 FAM236CP0DP71 79 aa12.45□□□□□ -0.42
GDE1-203ENST00000564172 FHL2Q14192 279 aa12.45□□□□□ -0.42
GDE1-203ENST00000564172 RHOHQ15669 191 aa12.45□□□□□ -0.42
GDE1-203ENST00000564172 RETNQ9HD89 108 aa12.45□□□□□ -0.42
GDE1-203ENST00000564172 TRGV4A0A0C4DH28 118 aa12.44□□□□□ -0.42
GDE1-203ENST00000564172 TRBV10-1A0A0K0K1A3 114 aa12.44□□□□□ -0.42
GDE1-203ENST00000564172 K7EIL1 84 aa12.44□□□□□ -0.42
GDE1-203ENST00000564172 TRBV6-4A0A1B0GX49 114 aa12.43□□□□□ -0.42
GDE1-203ENST00000564172 LEPROTO15243 131 aa12.43□□□□□ -0.42
GDE1-203ENST00000564172 TSHBP01222 138 aa12.43□□□□□ -0.42
GDE1-203ENST00000564172 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
GDE1-203ENST00000564172 CELA1Q9UNI1 258 aa12.42□□□□□ -0.42
GDE1-203ENST00000564172 SPART-AS1P0CW21 52 aa12.41□□□□□ -0.42
GDE1-203ENST00000564172 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
GDE1-203ENST00000564172 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
GDE1-203ENST00000564172 TMEM141Q96I45 108 aa12.41□□□□□ -0.42
GDE1-203ENST00000564172 SMIM26A0A096LP01 95 aa12.4□□□□□ -0.42
GDE1-203ENST00000564172 DAD1P61803 113 aa12.4□□□□□ -0.42
GDE1-203ENST00000564172 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
GDE1-203ENST00000564172 INAFM2P0DMQ5 153 aa12.39□□□□□ -0.43
GDE1-203ENST00000564172 MRPS36P82909 103 aaKnown RBP12.39□□□□□ -0.43
GDE1-203ENST00000564172 CLEC2BQ92478 149 aa12.39□□□□□ -0.43
GDE1-203ENST00000564172 LOC100131303A0A0U1RQF7 123 aa12.38□□□□□ -0.43
GDE1-203ENST00000564172 Q6JHZ5 121 aa12.38□□□□□ -0.43
GDE1-203ENST00000564172 RPL39P62891 51 aaKnown RBP12.38□□□□□ -0.43
GDE1-203ENST00000564172 TRAV8-3A0A0A6YYJ7 113 aa12.37□□□□□ -0.43
GDE1-203ENST00000564172 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
GDE1-203ENST00000564172 IGIPA6NJ69 53 aa12.36□□□□□ -0.43
GDE1-203ENST00000564172 DAZ4Q86SG3 579 aaKnown RBP12.36□□□□□ -0.43
GDE1-203ENST00000564172 COPS9Q8WXC6 57 aa12.36□□□□□ -0.43
GDE1-203ENST00000564172 DAZ3Q9NR90 486 aaKnown RBP12.36□□□□□ -0.43
GDE1-203ENST00000564172 PRO0255Q9UI72 69 aa12.36□□□□□ -0.43
GDE1-203ENST00000564172 USP17L23D6RBM5 183 aa12.35□□□□□ -0.43
GDE1-203ENST00000564172 TIMM17AQ99595 171 aa12.35□□□□□ -0.43
GDE1-203ENST00000564172 C11orf68Q9H3H3 251 aaKnown RBP12.34□□□□□ -0.43
GDE1-203ENST00000564172 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
GDE1-203ENST00000564172 CHCHD7Q9BUK0 85 aa12.34□□□□□ -0.43
GDE1-203ENST00000564172 A0A0J9YXY3 114 aa12.33□□□□□ -0.44
GDE1-203ENST00000564172 TMEM243Q9BU79 118 aa12.33□□□□□ -0.44
GDE1-203ENST00000564172 TIRAPP58753 221 aa12.32□□□□□ -0.44
GDE1-203ENST00000564172 NTM-AS1Q6ZSK4 140 aa12.32□□□□□ -0.44
GDE1-203ENST00000564172 LINC01561Q8N1V8 128 aa12.32□□□□□ -0.44
GDE1-203ENST00000564172 GYPEP15421 78 aa12.31□□□□□ -0.44
GDE1-203ENST00000564172 TENM3Q9P273 2699 aa12.31□□□□□ -0.44
GDE1-203ENST00000564172 A0A0J9YWU9 116 aa12.31□□□□□ -0.44
GDE1-203ENST00000564172 PAX4O43316 350 aa12.31□□□□□ -0.44
GDE1-203ENST00000564172 PRSS2P07478 247 aa12.31□□□□□ -0.44
GDE1-203ENST00000564172 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
GDE1-203ENST00000564172 LITAFQ99732 161 aa12.31□□□□□ -0.44
GDE1-203ENST00000564172 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
GDE1-203ENST00000564172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.29□□□□□ -0.44
GDE1-203ENST00000564172 IGKV2-29A2NJV5 120 aaPredicted RBP12.29□□□□□ -0.44
GDE1-203ENST00000564172 HTN3P15516 51 aa12.29□□□□□ -0.44
GDE1-203ENST00000564172 COX7A2LO14548 114 aa12.28□□□□□ -0.44
GDE1-203ENST00000564172 FP248Q71RG6 208 aaPredicted RBP12.28□□□□□ -0.44
GDE1-203ENST00000564172 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
GDE1-203ENST00000564172 DNHD1Q96M86 4753 aa12.27□□□□□ -0.44
GDE1-203ENST00000564172 UBE2D4Q9Y2X8 147 aa12.27□□□□□ -0.45
GDE1-203ENST00000564172 MIAQ16674 131 aa12.26□□□□□ -0.45
GDE1-203ENST00000564172 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
GDE1-203ENST00000564172 IGLV4-3A0A075B6K6 122 aa12.25□□□□□ -0.45
GDE1-203ENST00000564172 BAALC-AS2P0C853 105 aa12.25□□□□□ -0.45
GDE1-203ENST00000564172 Q6ZTC4 211 aa12.25□□□□□ -0.45
GDE1-203ENST00000564172 TRBV6-8A0A0A6YYG3 113 aa12.25□□□□□ -0.45
GDE1-203ENST00000564172 FAM19A1Q7Z5A9 133 aa12.25□□□□□ -0.45
GDE1-203ENST00000564172 BRK1Q8WUW1 75 aa12.25□□□□□ -0.45
GDE1-203ENST00000564172 BCE1O60756 84 aa12.24□□□□□ -0.45
GDE1-203ENST00000564172 C11orf45Q8TAV5 145 aa12.24□□□□□ -0.45
GDE1-203ENST00000564172 A0A096LPF7 62 aa12.23□□□□□ -0.45
GDE1-203ENST00000564172 HUWE1Q7Z6Z7 4374 aaKnown RBP12.23□□□□□ -0.45
GDE1-203ENST00000564172 NANOS2P60321 138 aaKnown RBP12.23□□□□□ -0.45
GDE1-203ENST00000564172 C22orf24Q9Y442 160 aa12.23□□□□□ -0.45
GDE1-203ENST00000564172 XCL1P47992 114 aa12.22□□□□□ -0.45
GDE1-203ENST00000564172 TIMM17BO60830 172 aa12.22□□□□□ -0.45
GDE1-203ENST00000564172 A0A0U1RQV1 116 aa12.21□□□□□ -0.45
GDE1-203ENST00000564172 A0A0U1RRA0 63 aa12.21□□□□□ -0.45
GDE1-203ENST00000564172 H7BZZ5 65 aa12.21□□□□□ -0.45
GDE1-203ENST00000564172 DGAT2L7PQ6IED9 249 aa12.21□□□□□ -0.46
GDE1-203ENST00000564172 UBE2L6O14933 153 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms