RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 FABP5P3A8MUU1 101 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 B4DEV8 164 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 SH2D1AO60880 128 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 APOC3P02656 99 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 ARL14EPLP0DKL9 152 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 S100A4P26447 101 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 RHEBQ15382 184 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 IQCJQ1A5X6 159 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 PYY3Q5JQD4 70 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 FAM74A1Q5RGS3 127 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 ZNF664Q8N3J9 261 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 OR10AG1Q8NH19 301 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 OR13C6PQ8NH95 151 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 BTF3L4Q96K17 158 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 CAMK2N2Q96S95 79 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 DERL1Q9BUN8 251 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 SMIM3Q9BZL3 60 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 CST9LQ9H4G1 147 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 SPANXB1Q9NS25 103 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 SULT1A2P50226 295 aa3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 EIF5AP63241 154 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 PEA15Q15121 130 aa3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 EIF5AL1Q6IS14 154 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 FA2HQ7L5A8 372 aa3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 PHF5AQ7RTV0 110 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 CBLN2Q8IUK8 224 aa3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
HERPUD1-208ENST00000563911 GVQW2A0A096LPI5 108 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 TRAV8-4A0A0B4J246 113 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 TMEM223A0PJW6 202 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 P01737 135 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 GCHFRP30047 84 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 RPL12P30050 165 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 TAS2R45P59539 299 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 CACNG7P62955 275 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 TMEM97Q5BJF2 176 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 SIGMAR1Q99720 223 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 PRO1933Q9H354 126 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 PHLDA3Q9Y5J5 127 aa3.27□□□□□ -1.89
HERPUD1-208ENST00000563911 TRAV26-2A0A0B4J265 109 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 A6NDN8 102 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 C17orf112F2Z3M2 114 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 M0QY20 66 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 CCL25O15444 150 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 APCSP02743 223 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 IGLV7-43P04211 117 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 H2BFSP57053 126 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 IFITM3Q01628 133 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 ZNF56Q15929 161 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 TMEM241Q24JQ0 296 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 C1orf137Q5JT78 98 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 Q86TA4 180 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 HIST1H2BAQ96A08 127 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 AQP10Q96PS8 301 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 SPANXCQ9NY87 97 aa3.26□□□□□ -1.89
HERPUD1-208ENST00000563911 TRBV25-1A0A075B6N4 114 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 IGHV1-24A0A0C4DH33 117 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 K7EN84 100 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 LYRM1O43325 122 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 MT-ND4LP03901 98 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 SMIM17P0DL12 118 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 TPT1P13693 172 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 MARVELD1Q9BSK0 173 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 PSMG3Q9BT73 122 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 TMEM126AQ9H061 195 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 HSPB8Q9UJY1 196 aa3.25□□□□□ -1.89
HERPUD1-208ENST00000563911 MAP1LC3B2A6NCE7 125 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 MT-ND6P03923 174 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 GZMBP10144 247 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 BCL2P10415 239 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 JOSD1Q15040 202 aaPredicted RBP3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 C9orf116Q5BN46 136 aaPredicted RBP3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 Q5W150 140 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 PPP1R1CQ8WVI7 109 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 RETNLBQ9BQ08 111 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 TMEM243Q9BU79 118 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 MAP1LC3BQ9GZQ8 125 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 KCNIP2Q9NS61 270 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 ERG28Q9UKR5 140 aa3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 CARHSP1Q9Y2V2 147 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-208ENST00000563911 BORCS7-ASMTA0A0B4J1R7 106 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 TINCRA0A1B0GVN0 87 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 A0A1W2PRE2 83 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 J3QR89 54 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 MPC2O95563 127 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 LTAP01374 205 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 ESDP10768 282 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 ATP6V0CP27449 155 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 GNG4P50150 75 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 FAM162BQ5T6X4 162 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 GTF2H5Q6ZYL4 71 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 OR10D4PQ8NGN7 298 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 SCGB1C1Q8TD33 95 aa3.23□□□□□ -1.89
HERPUD1-208ENST00000563911 SMIM26A0A096LP01 95 aa3.22□□□□□ -1.89
HERPUD1-208ENST00000563911 BPY2O14599 106 aa3.22□□□□□ -1.89
HERPUD1-208ENST00000563911 RPL23P62829 140 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms