RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 A0A087WYN8 130 aa8.38□□□□□ -1.07
ABCA3-203ENST00000563623 NF1P21359 2839 aa8.38□□□□□ -1.07
ABCA3-203ENST00000563623 DEFB121Q5J5C9 76 aa8.38□□□□□ -1.07
ABCA3-203ENST00000563623 A8MTW9 85 aa8.37□□□□□ -1.07
ABCA3-203ENST00000563623 HELZ2Q9BYK8 2649 aaKnown RBP8.37□□□□□ -1.07
ABCA3-203ENST00000563623 A0A087WVE0 104 aa8.37□□□□□ -1.07
ABCA3-203ENST00000563623 CRYGAP11844 174 aa8.37□□□□□ -1.07
ABCA3-203ENST00000563623 CCL18P55774 89 aa8.37□□□□□ -1.07
ABCA3-203ENST00000563623 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
ABCA3-203ENST00000563623 NCR3O14931 201 aa8.36□□□□□ -1.07
ABCA3-203ENST00000563623 USP24Q9UPU5 2620 aa8.36□□□□□ -1.07
ABCA3-203ENST00000563623 CYSTM1Q9H1C7 97 aa8.36□□□□□ -1.07
ABCA3-203ENST00000563623 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
ABCA3-203ENST00000563623 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
ABCA3-203ENST00000563623 SERP2Q8N6R1 65 aa8.34□□□□□ -1.07
ABCA3-203ENST00000563623 A0A096LNT2 108 aa8.34□□□□□ -1.07
ABCA3-203ENST00000563623 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
ABCA3-203ENST00000563623 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
ABCA3-203ENST00000563623 C16orf74Q96GX8 76 aa8.34□□□□□ -1.07
ABCA3-203ENST00000563623 IGKV2-28A0A075B6P5 120 aa8.34□□□□□ -1.08
ABCA3-203ENST00000563623 IGKV2D-28P01615 120 aa8.34□□□□□ -1.08
ABCA3-203ENST00000563623 PF4P02776 101 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 FLNAP21333 2647 aaKnown RBP8.33□□□□□ -1.08
ABCA3-203ENST00000563623 DNAJC9-AS1A6NH13 148 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 OXTP01178 125 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
ABCA3-203ENST00000563623 TMEM86BQ8N661 226 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 OVOL2Q9BRP0 275 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 TRBV6-8A0A0A6YYG3 113 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
ABCA3-203ENST00000563623 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
ABCA3-203ENST00000563623 H0YGX0 51 aa8.32□□□□□ -1.08
ABCA3-203ENST00000563623 RBM3P98179 157 aaKnown RBP8.32□□□□□ -1.08
ABCA3-203ENST00000563623 ESM1Q9NQ30 184 aa8.32□□□□□ -1.08
ABCA3-203ENST00000563623 NBEAL2Q6ZNJ1 2754 aa8.32□□□□□ -1.08
ABCA3-203ENST00000563623 GYPEP15421 78 aa8.31□□□□□ -1.08
ABCA3-203ENST00000563623 SS18Q15532 418 aa8.31□□□□□ -1.08
ABCA3-203ENST00000563623 FSHBP01225 129 aa8.31□□□□□ -1.08
ABCA3-203ENST00000563623 Q5XG85 94 aa8.31□□□□□ -1.08
ABCA3-203ENST00000563623 USP17L23D6RBM5 183 aa8.3□□□□□ -1.08
ABCA3-203ENST00000563623 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
ABCA3-203ENST00000563623 GCN1Q92616 2671 aaKnown RBP8.3□□□□□ -1.08
ABCA3-203ENST00000563623 CR1P17927 2039 aa8.3□□□□□ -1.08
ABCA3-203ENST00000563623 TRAV23DV6A0A075B6W5 121 aa8.3□□□□□ -1.08
ABCA3-203ENST00000563623 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
ABCA3-203ENST00000563623 ORMDL1Q9P0S3 153 aa8.3□□□□□ -1.08
ABCA3-203ENST00000563623 IBA57-AS1B1ANH7 110 aa8.29□□□□□ -1.08
ABCA3-203ENST00000563623 LINC00846Q9NV44 126 aa8.29□□□□□ -1.08
ABCA3-203ENST00000563623 ITPR3Q14573 2671 aa8.29□□□□□ -1.08
ABCA3-203ENST00000563623 IGHV3OR16-9A0A0B4J2B5 98 aa8.29□□□□□ -1.08
ABCA3-203ENST00000563623 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
ABCA3-203ENST00000563623 DEFB4AO15263 64 aa8.28□□□□□ -1.08
ABCA3-203ENST00000563623 GHRHP01286 108 aa8.28□□□□□ -1.08
ABCA3-203ENST00000563623 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
ABCA3-203ENST00000563623 NIPBLQ6KC79 2804 aaeCLIP8.28□□□□□ -1.08
ABCA3-203ENST00000563623 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
ABCA3-203ENST00000563623 MPLKIPQ8TAP9 179 aa8.28□□□□□ -1.08
ABCA3-203ENST00000563623 C2orf48Q96LS8 159 aa8.28□□□□□ -1.08
ABCA3-203ENST00000563623 HTN3P15516 51 aa8.27□□□□□ -1.09
ABCA3-203ENST00000563623 FHL2Q14192 279 aa8.27□□□□□ -1.09
ABCA3-203ENST00000563623 WFDC9Q8NEX5 89 aa8.27□□□□□ -1.09
ABCA3-203ENST00000563623 IL17DQ8TAD2 202 aa8.27□□□□□ -1.09
ABCA3-203ENST00000563623 TEP1Q99973 2627 aaKnown RBP8.27□□□□□ -1.09
ABCA3-203ENST00000563623 A0A087WZ39 114 aa8.27□□□□□ -1.09
ABCA3-203ENST00000563623 CXCL5P42830 114 aa8.27□□□□□ -1.09
ABCA3-203ENST00000563623 GIG44P09565 113 aaPredicted RBP8.26□□□□□ -1.09
ABCA3-203ENST00000563623 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
ABCA3-203ENST00000563623 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
ABCA3-203ENST00000563623 RETNQ9HD89 108 aa8.26□□□□□ -1.09
ABCA3-203ENST00000563623 ANGP03950 147 aaKnown RBP8.25□□□□□ -1.09
ABCA3-203ENST00000563623 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
ABCA3-203ENST00000563623 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
ABCA3-203ENST00000563623 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
ABCA3-203ENST00000563623 LINC01006Q8NI28 216 aa8.24□□□□□ -1.09
ABCA3-203ENST00000563623 NDUFC2O95298 119 aa8.23□□□□□ -1.09
ABCA3-203ENST00000563623 BBC3Q96PG8 261 aaPredicted RBP8.23□□□□□ -1.09
ABCA3-203ENST00000563623 LAMTOR3Q9UHA4 124 aa8.23□□□□□ -1.09
ABCA3-203ENST00000563623 LINC01561Q8N1V8 128 aa8.23□□□□□ -1.09
ABCA3-203ENST00000563623 SNURFQ9Y675 71 aa8.22□□□□□ -1.09
ABCA3-203ENST00000563623 HILS1P60008 231 aa8.21□□□□□ -1.09
ABCA3-203ENST00000563623 C6orf99Q4VX62 202 aa8.21□□□□□ -1.09
ABCA3-203ENST00000563623 Q6JHZ5 121 aa8.21□□□□□ -1.1
ABCA3-203ENST00000563623 Q8N3U1 123 aa8.21□□□□□ -1.1
ABCA3-203ENST00000563623 IGLV1-51P01701 117 aa8.2□□□□□ -1.1
ABCA3-203ENST00000563623 ENHOQ6UWT2 76 aa8.2□□□□□ -1.1
ABCA3-203ENST00000563623 LINC00482Q8N8I6 264 aa8.2□□□□□ -1.1
ABCA3-203ENST00000563623 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
ABCA3-203ENST00000563623 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
ABCA3-203ENST00000563623 HAMPP81172 84 aa8.19□□□□□ -1.1
ABCA3-203ENST00000563623 PRO0255Q9UI72 69 aa8.19□□□□□ -1.1
ABCA3-203ENST00000563623 SERP1Q9Y6X1 66 aa8.19□□□□□ -1.1
ABCA3-203ENST00000563623 UBL5Q9BZL1 73 aa8.18□□□□□ -1.1
ABCA3-203ENST00000563623 FAM19A1Q7Z5A9 133 aa8.18□□□□□ -1.1
ABCA3-203ENST00000563623 CCKP06307 115 aa8.18□□□□□ -1.1
ABCA3-203ENST00000563623 Q8IZM0 81 aa8.18□□□□□ -1.1
ABCA3-203ENST00000563623 Q8N814 137 aa8.18□□□□□ -1.1
ABCA3-203ENST00000563623 DEFB135Q30KP9 77 aa8.17□□□□□ -1.1
ABCA3-203ENST00000563623 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms