RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PLEKHH2Q8IVE3 1493 aa0.1□□□□□ -2.39
HMGB1P33-201ENST00000563485 LPAP08519 4548 aa0.09□□□□□ -2.39
HMGB1P33-201ENST00000563485 ARHGEF12Q9NZN5 1544 aa0.09□□□□□ -2.39
HMGB1P33-201ENST00000563485 SCN7AQ01118 1682 aa0.09□□□□□ -2.39
HMGB1P33-201ENST00000563485 MYCBP2O75592 4640 aa0.09□□□□□ -2.39
HMGB1P33-201ENST00000563485 TRBV7-7A0A0K0K1E9 115 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 M0R3E3 92 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 GNGT2O14610 69 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 ASIPP42127 132 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 SERP2Q8N6R1 65 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 CACFD1Q9UGQ2 172 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 WNK2Q9Y3S1 2297 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 SPTA1P02549 2419 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 XRN1Q8IZH2 1706 aaKnown RBP0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 PDCD11Q14690 1871 aaKnown RBP0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 COL7A1Q02388 2944 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 ABCC10Q5T3U5 1492 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 RAPGEF2Q9Y4G8 1499 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 CACNA1AO00555 2505 aa0.09□□□□□ -2.4
HMGB1P33-201ENST00000563485 SETBP1Q9Y6X0 1596 aa0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 S100A10P60903 97 aa0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 UBA52P62987 128 aaKnown RBP0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 HMGN3Q15651 99 aa0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 PMCHL1Q16048 86 aa0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 LINC01600Q96MT4 127 aa0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 POLA1P09884 1462 aaPredicted RBP0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 PPRC1Q5VV67 1664 aaKnown RBP0.08□□□□□ -2.4
HMGB1P33-201ENST00000563485 ANKRD26Q9UPS8 1709 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 ATRQ13535 2644 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 EDC4Q6P2E9 1401 aaKnown RBP0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 HMCN2Q8NDA2 5059 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 A0A0G2JND7 137 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 LINC00959A0A1B0GUT2 108 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 SYS1-DBNDD2H3BUS1 97 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 COX6B1P14854 86 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 SPRR1AP35321 89 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 PKIAP61925 76 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 COL5A1-AS1Q5SY13 56 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 NCMAPQ5T1S8 102 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 ALKAL2Q6UX46 152 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 PMCHL2Q9BQD1 86 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 SHPRHQ149N8 1683 aa0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 NSD1Q96L73 2696 aaPredicted RBP0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 MARF1Q9Y4F3 1742 aaKnown RBP0.07□□□□□ -2.4
HMGB1P33-201ENST00000563485 ALMS1Q8TCU4 4167 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 TNXBP22105 4242 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 CCDC141Q6ZP82 1450 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 C7orf77A4D0Y5 90 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 UQCRHP07919 91 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 VAMP8Q9BV40 100 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 SNHG12Q9BXW3 62 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 CHD8Q9HCK8 2581 aa0.06□□□□□ -2.4
HMGB1P33-201ENST00000563485 KIAA0556O60303 1618 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 NRXN1Q9ULB1 1477 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 CUX1P39880 1505 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 H3BQF6 201 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 K7EQZ3 153 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 DEFB109BQ30KR1 87 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 PSMG4Q5JS54 123 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 SFTA2Q6UW10 78 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 CSPG4Q6UVK1 2322 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 TARBP1Q13395 1621 aaKnown RBP0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 FLNCQ14315 2725 aa0.05□□□□□ -2.4
HMGB1P33-201ENST00000563485 CEP162Q5TB80 1403 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 KIAA1551Q9HCM1 1747 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 ATP10BO94823 1461 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 NLRP1Q9C000 1473 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 TTC37Q6PGP7 1564 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 A0A087WVE0 104 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 FXYD6-FXYD2A0A087WZ82 144 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 H0Y9P7 68 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 CFDP00746 253 aaPredicted RBP0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 GYPAP02724 150 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 USMG5Q96IX5 58 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 FLNAP21333 2647 aaKnown RBP0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 LRRC37AA6NMS7 1700 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 PAPPA2Q9BXP8 1791 aa0.04□□□□□ -2.4
HMGB1P33-201ENST00000563485 SAMD9Q5K651 1589 aa0.03□□□□□ -2.4
HMGB1P33-201ENST00000563485 EP300Q09472 2414 aaPredicted RBP0.03□□□□□ -2.4
HMGB1P33-201ENST00000563485 UQCRHLA0A096LP55 91 aa0.03□□□□□ -2.4
HMGB1P33-201ENST00000563485 ARMS2P0C7Q2 107 aa0.03□□□□□ -2.4
HMGB1P33-201ENST00000563485 SPRR1BP22528 89 aa0.03□□□□□ -2.4
HMGB1P33-201ENST00000563485 LCN9Q8WX39 176 aa0.03□□□□□ -2.4
HMGB1P33-201ENST00000563485 AKAP12Q02952 1782 aa0.03□□□□□ -2.4
HMGB1P33-201ENST00000563485 DCHS2Q6V1P9 2916 aa0.03□□□□□ -2.41
HMGB1P33-201ENST00000563485 BAZ1AQ9NRL2 1556 aaPredicted RBP0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 CLTCQ00610 1675 aaKnown RBP0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 A0A1B0GU69 56 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 COX8AP10176 69 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 SPRR2DP22532 72 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 ZNF720Q7Z2F6 126 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 C6orf201Q7Z4U5 140 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 FDCSPQ8NFU4 85 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 ABCC3O15438 1527 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 SLIT1O75093 1534 aa0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 WNK1Q9H4A3 2382 aa0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 MAP1BP46821 2468 aaKnown RBP0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 SPINK4O60575 86 aa0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 PYY3Q5JQD4 70 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms