RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 RMI2Q96E14 147 aa9.42□□□□□ -0.9
SMPD3-205ENST00000563455 SACSQ9NZJ4 4579 aa9.42□□□□□ -0.9
SMPD3-205ENST00000563455 TAX1BP3O14907 124 aa9.41□□□□□ -0.9
SMPD3-205ENST00000563455 COX17Q14061 63 aa9.41□□□□□ -0.9
SMPD3-205ENST00000563455 CFAP161Q6P656 301 aa9.41□□□□□ -0.9
SMPD3-205ENST00000563455 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
SMPD3-205ENST00000563455 LINC00476Q8WZB0 136 aa9.41□□□□□ -0.9
SMPD3-205ENST00000563455 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
SMPD3-205ENST00000563455 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
SMPD3-205ENST00000563455 A0A1B0GV90 55 aa9.4□□□□□ -0.9
SMPD3-205ENST00000563455 CKS1BP61024 79 aa9.4□□□□□ -0.9
SMPD3-205ENST00000563455 MEIG1Q5JSS6 88 aa9.4□□□□□ -0.9
SMPD3-205ENST00000563455 LYRM7Q5U5X0 104 aa9.4□□□□□ -0.9
SMPD3-205ENST00000563455 LYSTQ99698 3801 aa9.4□□□□□ -0.9
SMPD3-205ENST00000563455 LITAFQ99732 161 aa9.4□□□□□ -0.9
SMPD3-205ENST00000563455 IGLL5B9A064 214 aa9.39□□□□□ -0.91
SMPD3-205ENST00000563455 FOXI1Q12951 378 aa9.39□□□□□ -0.91
SMPD3-205ENST00000563455 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
SMPD3-205ENST00000563455 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
SMPD3-205ENST00000563455 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
SMPD3-205ENST00000563455 TOMM7Q9P0U1 55 aa9.39□□□□□ -0.91
SMPD3-205ENST00000563455 A0A0B4J2C4 111 aa9.38□□□□□ -0.91
SMPD3-205ENST00000563455 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
SMPD3-205ENST00000563455 C1orf43Q9BWL3 253 aa9.38□□□□□ -0.91
SMPD3-205ENST00000563455 STARD9Q9P2P6 4700 aa9.38□□□□□ -0.91
SMPD3-205ENST00000563455 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
SMPD3-205ENST00000563455 CLPSL2Q6UWE3 100 aa9.37□□□□□ -0.91
SMPD3-205ENST00000563455 GTF2H5Q6ZYL4 71 aa9.37□□□□□ -0.91
SMPD3-205ENST00000563455 MUSTN1Q8IVN3 82 aa9.37□□□□□ -0.91
SMPD3-205ENST00000563455 PRO1854Q9UHT4 67 aa9.37□□□□□ -0.91
SMPD3-205ENST00000563455 FABP2P12104 132 aa9.36□□□□□ -0.91
SMPD3-205ENST00000563455 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
SMPD3-205ENST00000563455 A4D1N5 150 aa9.35□□□□□ -0.91
SMPD3-205ENST00000563455 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
SMPD3-205ENST00000563455 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
SMPD3-205ENST00000563455 VAMP3Q15836 100 aa9.34□□□□□ -0.91
SMPD3-205ENST00000563455 ADAMTSL4-AS1Q5T5F5 129 aa9.34□□□□□ -0.91
SMPD3-205ENST00000563455 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
SMPD3-205ENST00000563455 EPPK1P58107 5090 aaKnown RBP9.34□□□□□ -0.91
SMPD3-205ENST00000563455 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
SMPD3-205ENST00000563455 GVQW2A0A096LPI5 108 aaPredicted RBP9.33□□□□□ -0.92
SMPD3-205ENST00000563455 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
SMPD3-205ENST00000563455 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
SMPD3-205ENST00000563455 ERG28Q9UKR5 140 aa9.33□□□□□ -0.92
SMPD3-205ENST00000563455 LOC107984156A0A0G2JMH3 177 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 A0A1W2PPM0 123 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 H3BUT2 72 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 CFC1BP0CG36 223 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 CFC1P0CG37 223 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 LINC00158P58513 81 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 UBE2V1Q13404 147 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 ARL17AQ8IVW1 177 aa9.32□□□□□ -0.92
SMPD3-205ENST00000563455 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
SMPD3-205ENST00000563455 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
SMPD3-205ENST00000563455 SPAG11BQ08648 103 aa9.31□□□□□ -0.92
SMPD3-205ENST00000563455 Q8N3U1 123 aa9.31□□□□□ -0.92
SMPD3-205ENST00000563455 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
SMPD3-205ENST00000563455 TRBV30A0A0K0K1B3 111 aa9.3□□□□□ -0.92
SMPD3-205ENST00000563455 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
SMPD3-205ENST00000563455 TRBV20-1A0A075B6N2 111 aa9.29□□□□□ -0.92
SMPD3-205ENST00000563455 TRAV13-2A0A0B4J235 113 aa9.29□□□□□ -0.92
SMPD3-205ENST00000563455 COX6CP09669 75 aa9.29□□□□□ -0.92
SMPD3-205ENST00000563455 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
SMPD3-205ENST00000563455 MIR7-3HGQ8N6C7 128 aa9.29□□□□□ -0.92
SMPD3-205ENST00000563455 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
SMPD3-205ENST00000563455 TTC32Q5I0X7 151 aa9.28□□□□□ -0.92
SMPD3-205ENST00000563455 UBE2DNLQ8IWF7 75 aa9.28□□□□□ -0.92
SMPD3-205ENST00000563455 NTN5Q8WTR8 489 aaPredicted RBP9.28□□□□□ -0.92
SMPD3-205ENST00000563455 ALMS1Q8TCU4 4167 aa9.27□□□□□ -0.92
SMPD3-205ENST00000563455 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.93
SMPD3-205ENST00000563455 K7ERJ3 54 aa9.27□□□□□ -0.93
SMPD3-205ENST00000563455 PLECQ15149 4684 aaKnown RBP9.26□□□□□ -0.93
SMPD3-205ENST00000563455 K7EP34 96 aa9.26□□□□□ -0.93
SMPD3-205ENST00000563455 NDUFC2O95298 119 aa9.26□□□□□ -0.93
SMPD3-205ENST00000563455 SPCS1Q9Y6A9 102 aa9.26□□□□□ -0.93
SMPD3-205ENST00000563455 TSPAN13O95857 204 aa9.25□□□□□ -0.93
SMPD3-205ENST00000563455 PFN2P35080 140 aa9.25□□□□□ -0.93
SMPD3-205ENST00000563455 RNF151Q2KHN1 245 aa9.25□□□□□ -0.93
SMPD3-205ENST00000563455 SND1-IT1Q9HBX3 110 aa9.25□□□□□ -0.93
SMPD3-205ENST00000563455 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
SMPD3-205ENST00000563455 Q1RN00 199 aa9.23□□□□□ -0.93
SMPD3-205ENST00000563455 C2orf82Q6UX34 121 aa9.23□□□□□ -0.93
SMPD3-205ENST00000563455 DAND5Q8N907 189 aa9.23□□□□□ -0.93
SMPD3-205ENST00000563455 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
SMPD3-205ENST00000563455 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
SMPD3-205ENST00000563455 PSMB2P49721 201 aa9.22□□□□□ -0.93
SMPD3-205ENST00000563455 CBY1Q9Y3M2 126 aa9.22□□□□□ -0.93
SMPD3-205ENST00000563455 C14orf177Q52M58 125 aa9.21□□□□□ -0.94
SMPD3-205ENST00000563455 PKIGQ9Y2B9 76 aa9.21□□□□□ -0.94
SMPD3-205ENST00000563455 F8W1H4 67 aa9.2□□□□□ -0.94
SMPD3-205ENST00000563455 NPC2P61916 151 aa9.2□□□□□ -0.94
SMPD3-205ENST00000563455 UNQ6190/PRO20217Q6UXQ8 127 aa9.2□□□□□ -0.94
SMPD3-205ENST00000563455 SOSTDC1Q6X4U4 206 aa9.2□□□□□ -0.94
SMPD3-205ENST00000563455 LINC00336Q6ZUF6 198 aa9.2□□□□□ -0.94
SMPD3-205ENST00000563455 C15orf56Q8N910 161 aa9.2□□□□□ -0.94
SMPD3-205ENST00000563455 Q9HAA7 133 aa9.2□□□□□ -0.94
SMPD3-205ENST00000563455 RPL13AP40429 203 aaKnown RBP9.19□□□□□ -0.94
SMPD3-205ENST00000563455 SYCNQ0VAF6 134 aa9.19□□□□□ -0.94
SMPD3-205ENST00000563455 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
SMPD3-205ENST00000563455 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms