RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 LELP1Q5T871 98 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 FAM74A4Q5TZK3 123 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 SPANXN1Q5VSR9 72 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 FAM104BQ5XKR9 115 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 ATP6V0E2Q8NHE4 81 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 RNASE7Q9H1E1 156 aaKnown RBP2.84□□□□□ -1.95
LINC00254-201ENST00000563416 GTSF1LQ9H1H1 148 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 ZNF706Q9Y5V0 76 aaPredicted RBP2.84□□□□□ -1.95
LINC00254-201ENST00000563416 RYR1P21817 5038 aa2.84□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 MUC21A0A0G2JKD1 596 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 MUC21A0A140T8X8 626 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 TRGC1P0CF51 173 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 FOXA3P55318 350 aaPredicted RBP2.83□□□□□ -1.96
LINC00254-201ENST00000563416 UBE2D3P61077 147 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 UBE2D2P62837 147 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 PEA15Q15121 130 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 ZNF56Q15929 161 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 TMEM241Q24JQ0 296 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 LYZL1Q6UWQ5 148 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 C10orf126Q8N4M7 172 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 NAT8Q9UHE5 227 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 FAT1Q14517 4588 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 A0A087WWC5 75 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 IBA57-AS1B1ANH7 110 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 M0QY20 66 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 SMIM17P0DL12 118 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 NTF3P20783 257 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 EVI2AP22794 236 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 IFITM2Q01629 132 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 CLLU1Q5K131 121 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 FAM19A3Q7Z5A8 133 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 COMMD7Q86VX2 200 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 TSKUQ8WUA8 353 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 DNAJC30Q96LL9 226 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 DPH3P1Q9H4G8 78 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 V9GYV3 84 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV6-8A0A0A6YYG3 113 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 HIGD1CA8MV81 97 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 MGPP08493 103 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 DDTP30046 118 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 RAB14P61106 215 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 ADIRFQ15847 76 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 TMEM97Q5BJF2 176 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 RASL11AQ6T310 242 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 Q6ZRU5 148 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 DAZ4Q86SG3 579 aaKnown RBP2.81□□□□□ -1.96
LINC00254-201ENST00000563416 NIT1Q86X76 327 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 FRZBQ92765 325 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 A0A1B0GUT8 65 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 SMIM27A0A1W2PRY6 76 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 IQCJQ1A5X6 159 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 NUP35Q8NFH5 326 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 TMEM191AQ9H0A3 160 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 NIT2Q9NQR4 276 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 NAT8BQ9UHF3 227 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV25-1A0A075B6N4 114 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 A0A087WTM6 91 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 TRAV26-2A0A0B4J265 109 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV6-5A0A0K0K1A5 114 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 LRCOL1A6NCL2 159 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-30P01768 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-33P01772 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-30-5P0DP03 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 ADCYAP1P18509 176 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 PKIAP61925 76 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 BATFQ16520 125 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 C1orf195Q5TG92 126 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 SMIM15Q7Z3B0 74 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.79□□□□□ -1.96
LINC00254-201ENST00000563416 BORCS7Q96B45 105 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 RPL39LQ96EH5 51 aaKnown RBP2.79□□□□□ -1.96
LINC00254-201ENST00000563416 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 A0A087WX48 190 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV1-24A0A0C4DH33 117 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 NCR2O95944 276 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 RAB5BP61020 215 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 ELOBQ15370 118 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 ATP5L2Q7Z4Y8 100 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 SPATA12Q7Z6I5 190 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 AMN1Q8IY45 258 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV24-1A0A075B6N3 115 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 TRBV27A0A0K0K1C4 114 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 TMEM218A2RU14 115 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 LINC00862A6NCI5 91 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 SDHAF1A6NFY7 115 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 C16orf90A8MZG2 172 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 K7ERS5 55 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 S100A8P05109 93 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 ESDP10768 282 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 POLR2KP53803 58 aaKnown RBP2.77□□□□□ -1.97
LINC00254-201ENST00000563416 RBX1P62877 108 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 Q0VG73 95 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 MIAQ16674 131 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 MRPL51Q4U2R6 128 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms