RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 IGLV2-18A0A075B6J9 118 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 K7EMI3 77 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 ATXN8Q156A1 80 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 DEFB113Q30KQ7 82 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 Q86TA4 180 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 MYO7BQ6PIF6 2116 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 NBPF19A0A087WUL8 3843 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 IGKV3D-11A0A0A0MRZ8 115 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 TRBV30A0A0K0K1B3 111 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 ZNF137PP52743 207 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 ZNF826PQ6ZT77 177 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 RELNP78509 3460 aa3.08□□□□□ -1.92
SMG1-207ENST00000563235 PTPRQQ9UMZ3 2332 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 RP1P56715 2156 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 POLQO75417 2590 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 D6R8Y8 96 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 PANO1I0J062 215 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 IGLV2-11P01706 119 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 ARMS2P0C7Q2 107 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 Q8N9P0 234 aaPredicted RBP3.07□□□□□ -1.92
SMG1-207ENST00000563235 CNFNQ9BYD5 112 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 TMEM14BQ9NUH8 114 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 ASCC3Q8N3C0 2202 aaKnown RBP3.07□□□□□ -1.92
SMG1-207ENST00000563235 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 H3BPC8 53 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 IGHV3-30P01768 117 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 IGHV3-33P01772 117 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 IGHV3-30-5P0DP03 117 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 C9orf129Q5T035 196 aaKnown RBP3.07□□□□□ -1.92
SMG1-207ENST00000563235 C14orf178Q8N769 122 aaPredicted RBP3.07□□□□□ -1.92
SMG1-207ENST00000563235 TMEM263Q8WUH6 116 aaKnown RBP3.07□□□□□ -1.92
SMG1-207ENST00000563235 ZNRD1Q9P1U0 126 aa3.07□□□□□ -1.92
SMG1-207ENST00000563235 KNL1Q8NG31 2342 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 F8VRH5 84 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 H3BQ85 93 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 USP9YO00507 2555 aaPredicted RBP3.06□□□□□ -1.92
SMG1-207ENST00000563235 SPG11Q96JI7 2443 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 TRAV12-3A0A0B4J271 114 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 IGHV1-18A0A0C4DH31 117 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 PLGLAQ15195 96 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 CSAG1Q6PB30 78 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 LITAFQ99732 161 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 UBE2D4Q9Y2X8 147 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 DNAJC13O75165 2243 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 TRAV40A0A0B4J280 105 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 A0A0J9YY99 117 aa3.06□□□□□ -1.92
SMG1-207ENST00000563235 GOLGA4Q13439 2230 aaKnown RBP3.05□□□□□ -1.92
SMG1-207ENST00000563235 ZNF815PA8K554 130 aa3.05□□□□□ -1.92
SMG1-207ENST00000563235 H7C423 109 aa3.05□□□□□ -1.92
SMG1-207ENST00000563235 CDC42SE2Q9NRR3 84 aa3.05□□□□□ -1.92
SMG1-207ENST00000563235 OTOGQ6ZRI0 2925 aa3.05□□□□□ -1.92
SMG1-207ENST00000563235 MRPS21P82921 87 aaKnown RBP3.05□□□□□ -1.92
SMG1-207ENST00000563235 Q6JHZ5 121 aa3.05□□□□□ -1.92
SMG1-207ENST00000563235 AMELXQ99217 191 aa3.05□□□□□ -1.92
SMG1-207ENST00000563235 SNURFQ9Y675 71 aa3.05□□□□□ -1.92
SMG1-207ENST00000563235 ASXL3Q9C0F0 2248 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 F8P00451 2351 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 A0A1W2PPR1 153 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 CLPSL1A2RUU4 121 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 SPINK9Q5DT21 86 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 Q6ZR54 194 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 TMEM14CQ9P0S9 112 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 PI4KAP42356 2102 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 AHCTF1Q8WYP5 2266 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 A0A0J9YX75 114 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 IGLV1-47P01700 117 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 Q1RN00 199 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 LINC00483Q53H64 154 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 LIMD2Q9BT23 127 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 C14orf132Q9NPU4 83 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 NOTCH2Q04721 2471 aa3.04□□□□□ -1.92
SMG1-207ENST00000563235 MED13LQ71F56 2210 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 IGLV1-44P01699 117 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 PRCDQ00LT1 54 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 HIGD2BQ4VC39 106 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 Q6ZS52 159 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 FDCSPQ8NFU4 85 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 ALPK2Q86TB3 2170 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 FREM2Q5SZK8 3169 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 ABCA4P78363 2273 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 ITPR2Q14571 2701 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 A0A087WVE0 104 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 RTL8CO15255 209 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 C10orf113Q5VZT2 155 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 C2orf82Q6UX34 121 aa3.03□□□□□ -1.92
SMG1-207ENST00000563235 C9orf47Q6ZRZ4 202 aa3.03□□□□□ -1.93
SMG1-207ENST00000563235 LYPD1Q8N2G4 141 aa3.03□□□□□ -1.93
SMG1-207ENST00000563235 TIMM8BQ9Y5J9 83 aaPredicted RBP3.03□□□□□ -1.93
SMG1-207ENST00000563235 SETD2Q9BYW2 2564 aaPredicted RBP3.02□□□□□ -1.93
SMG1-207ENST00000563235 CACNA1DQ01668 2161 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 PSCAO43653 123 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 CRIP1P50238 77 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 Q8NAQ8 132 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 SDK1Q7Z5N4 2213 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 LRRK2Q5S007 2527 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 TLN1Q9Y490 2541 aaKnown RBP3.02□□□□□ -1.93
SMG1-207ENST00000563235 LAMA5O15230 3695 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 IGHV3OR16-8A0A075B7F1 116 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 TRAV10A0A0B4J240 114 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms