RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 A0A087WZ39 114 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 TRGC2P03986 189 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 COX6A2Q02221 97 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 CIRBPQ14011 172 aaKnown RBP3.97□□□□□ -1.77
CNOT1-204ENST00000563130 SCGB3A1Q96QR1 104 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 C2orf88Q9BSF0 95 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 IGHV3-64A0A075B6Q5 118 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 HAMPP81172 84 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 LINC00526Q96FQ7 95 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 CHAC1Q9BUX1 264 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 IGLV4-69A0A075B6H9 119 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 PANO1I0J062 215 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 APOMO95445 188 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 RAB5BP61020 215 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 C6orf226Q5I0X4 101 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 SCXQ7RTU7 201 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 LINC01561Q8N1V8 128 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 OR10D4PQ8NGN7 298 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
CNOT1-204ENST00000563130 HBDP02042 147 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 PDZD11Q5EBL8 140 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 CIRBP-AS1Q8TBR5 109 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
CNOT1-204ENST00000563130 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-204ENST00000563130 SCO1O75880 301 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 HERVK_113P63121 156 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 SEC11AP67812 179 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 SYCNQ0VAF6 134 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 PMCHL1Q16048 86 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 CARD19Q96LW7 228 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 CST9LQ9H4G1 147 aa3.95□□□□□ -1.78
CNOT1-204ENST00000563130 IGLV5-45A0A087WSX0 123 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 A0A0J9YXV3 536 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-204ENST00000563130 S100A1P23297 94 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 SPAG11BQ08648 103 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 PMVKQ15126 192 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 Q6ZRU5 148 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 ORAOV1Q8WV07 137 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 CDKN2A-AS1Q9UH64 79 aa3.94□□□□□ -1.78
CNOT1-204ENST00000563130 TINCRA0A1B0GVN0 87 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 CAMK2N2Q96S95 79 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 MRPL35Q9NZE8 188 aaKnown RBP3.93□□□□□ -1.78
CNOT1-204ENST00000563130 ATP5LO75964 103 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 CHTF8P0CG12 524 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 GAGE2BQ13066 116 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 GAGE2EQ4V326 116 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 GAGE2AQ6NT46 116 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 GAGE2DQ9UEU5 116 aa3.93□□□□□ -1.78
CNOT1-204ENST00000563130 A0A096LNI7 61 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 EPM2AB3EWF7 344 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 C10orf25Q5T742 122 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 Q5VSD8 79 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 BAGE3Q86Y29 109 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 A0A087WYN8 130 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 SMIM1B2RUZ4 78 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 NDUFA1O15239 70 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 HSBP1O75506 76 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 SERF1AO75920 110 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 Q8IZM0 81 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 PLAC8Q9NZF1 115 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 PKIGQ9Y2B9 76 aa3.92□□□□□ -1.78
CNOT1-204ENST00000563130 VPS13BQ7Z7G8 4022 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 NUPR1O60356 82 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 TLX1NBP0CAT3 122 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-204ENST00000563130 UNQ6190/PRO20217Q6UXQ8 127 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 FAM19A2Q8N3H0 131 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 C6orf48Q9UBA6 75 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 IGKV2-24A0A0C4DH68 120 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 TRBV30A0A0K0K1B3 111 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 LOC107984640A0A0U1RRK4 108 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BKO60814 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BJP06899 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BOP23527 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BBP33778 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BDP58876 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BCP62807 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST2H2BEQ16778 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-204ENST00000563130 C2orf82Q6UX34 121 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 PACRGQ96M98 296 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 LINC00474Q9P2X8 69 aa3.91□□□□□ -1.78
CNOT1-204ENST00000563130 TRAV12-1A0A0B4J245 112 aa3.9□□□□□ -1.79
CNOT1-204ENST00000563130 ZNF22P17026 224 aaPredicted RBP3.9□□□□□ -1.79
CNOT1-204ENST00000563130 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
CNOT1-204ENST00000563130 NDUFA6P56556 154 aa3.9□□□□□ -1.79
CNOT1-204ENST00000563130 C11orf86A6NJI1 115 aa3.89□□□□□ -1.79
CNOT1-204ENST00000563130 H3BRM9 83 aa3.89□□□□□ -1.79
CNOT1-204ENST00000563130 LEPROTL1O95214 131 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms