RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 Q6ZRP5 223 aa9.63□□□□□ -0.87
CCNDBP1-203ENST00000562553 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
CCNDBP1-203ENST00000562553 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
CCNDBP1-203ENST00000562553 RAB5BP61020 215 aa9.62□□□□□ -0.87
CCNDBP1-203ENST00000562553 PDZD11Q5EBL8 140 aa9.62□□□□□ -0.87
CCNDBP1-203ENST00000562553 Q8IZM0 81 aa9.62□□□□□ -0.87
CCNDBP1-203ENST00000562553 PACRGQ96M98 296 aaPredicted RBP9.62□□□□□ -0.87
CCNDBP1-203ENST00000562553 TRBV30A0A0K0K1B3 111 aa9.61□□□□□ -0.87
CCNDBP1-203ENST00000562553 SMIM1B2RUZ4 78 aa9.61□□□□□ -0.87
CCNDBP1-203ENST00000562553 PRSS2P07478 247 aa9.61□□□□□ -0.87
CCNDBP1-203ENST00000562553 TLX1NBP0CAT3 122 aa9.61□□□□□ -0.87
CCNDBP1-203ENST00000562553 C9orf116Q5BN46 136 aaPredicted RBP9.61□□□□□ -0.87
CCNDBP1-203ENST00000562553 TRGC2P03986 189 aa9.6□□□□□ -0.87
CCNDBP1-203ENST00000562553 NDUFA6P56556 154 aa9.6□□□□□ -0.87
CCNDBP1-203ENST00000562553 GAGE2EQ4V326 116 aa9.59□□□□□ -0.87
CCNDBP1-203ENST00000562553 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
CCNDBP1-203ENST00000562553 GAGE2DQ9UEU5 116 aa9.59□□□□□ -0.87
CCNDBP1-203ENST00000562553 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
CCNDBP1-203ENST00000562553 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
CCNDBP1-203ENST00000562553 IGLC3P0DOY3 106 aa9.58□□□□□ -0.88
CCNDBP1-203ENST00000562553 CKS1BP61024 79 aa9.58□□□□□ -0.88
CCNDBP1-203ENST00000562553 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
CCNDBP1-203ENST00000562553 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
CCNDBP1-203ENST00000562553 COLCA2A8K830 154 aa9.57□□□□□ -0.88
CCNDBP1-203ENST00000562553 ATP5LO75964 103 aa9.57□□□□□ -0.88
CCNDBP1-203ENST00000562553 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
CCNDBP1-203ENST00000562553 PHF5AQ7RTV0 110 aaKnown RBP9.56□□□□□ -0.88
CCNDBP1-203ENST00000562553 COX7B2Q8TF08 81 aa9.56□□□□□ -0.88
CCNDBP1-203ENST00000562553 F8VRH5 84 aa9.55□□□□□ -0.88
CCNDBP1-203ENST00000562553 SCO1O75880 301 aa9.55□□□□□ -0.88
CCNDBP1-203ENST00000562553 OXTP01178 125 aa9.55□□□□□ -0.88
CCNDBP1-203ENST00000562553 ZNF22P17026 224 aaPredicted RBP9.55□□□□□ -0.88
CCNDBP1-203ENST00000562553 BAGE3Q86Y29 109 aa9.55□□□□□ -0.88
CCNDBP1-203ENST00000562553 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
CCNDBP1-203ENST00000562553 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
CCNDBP1-203ENST00000562553 CXCL5P42830 114 aa9.54□□□□□ -0.88
CCNDBP1-203ENST00000562553 LINC00310P59036 64 aa9.54□□□□□ -0.88
CCNDBP1-203ENST00000562553 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
CCNDBP1-203ENST00000562553 FAM19A5Q7Z5A7 132 aaPredicted RBP9.54□□□□□ -0.88
CCNDBP1-203ENST00000562553 FAM19A2Q8N3H0 131 aa9.54□□□□□ -0.88
CCNDBP1-203ENST00000562553 H3BRM9 83 aa9.53□□□□□ -0.88
CCNDBP1-203ENST00000562553 HSBP1O75506 76 aa9.52□□□□□ -0.89
CCNDBP1-203ENST00000562553 SERF1AO75920 110 aa9.52□□□□□ -0.89
CCNDBP1-203ENST00000562553 SERTAD4-AS1Q5TG53 156 aa9.52□□□□□ -0.89
CCNDBP1-203ENST00000562553 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
CCNDBP1-203ENST00000562553 IGLV5-39A0A0G2JS06 123 aa9.51□□□□□ -0.89
CCNDBP1-203ENST00000562553 KRTAP11-1Q8IUC1 163 aa9.51□□□□□ -0.89
CCNDBP1-203ENST00000562553 CHTOPQ9Y3Y2 248 aaKnown RBP9.51□□□□□ -0.89
CCNDBP1-203ENST00000562553 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
CCNDBP1-203ENST00000562553 PSORS1C2Q9UIG4 136 aa9.5□□□□□ -0.89
CCNDBP1-203ENST00000562553 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
CCNDBP1-203ENST00000562553 M0QXV9 152 aa9.49□□□□□ -0.89
CCNDBP1-203ENST00000562553 NUPR1O60356 82 aa9.49□□□□□ -0.89
CCNDBP1-203ENST00000562553 TMEM170BQ5T4T1 132 aa9.49□□□□□ -0.89
CCNDBP1-203ENST00000562553 TNXBP22105 4242 aa9.48□□□□□ -0.89
CCNDBP1-203ENST00000562553 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
CCNDBP1-203ENST00000562553 H0Y8G0 127 aa9.45□□□□□ -0.9
CCNDBP1-203ENST00000562553 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
CCNDBP1-203ENST00000562553 SRSF9Q13242 221 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCNDBP1-203ENST00000562553 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
CCNDBP1-203ENST00000562553 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
CCNDBP1-203ENST00000562553 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
CCNDBP1-203ENST00000562553 UBE2BP63146 152 aa9.43□□□□□ -0.9
CCNDBP1-203ENST00000562553 ODF1Q14990 250 aa9.43□□□□□ -0.9
CCNDBP1-203ENST00000562553 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
CCNDBP1-203ENST00000562553 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BKO60814 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BJP06899 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 FABP4P15090 132 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BOP23527 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BBP33778 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 PFN2P35080 140 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BDP58876 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BCP62807 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
CCNDBP1-203ENST00000562553 ERG28Q9UKR5 140 aa9.41□□□□□ -0.9
CCNDBP1-203ENST00000562553 IGLV7-43P04211 117 aa9.4□□□□□ -0.9
CCNDBP1-203ENST00000562553 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
CCNDBP1-203ENST00000562553 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
CCNDBP1-203ENST00000562553 TP73-AS1Q9UF72 201 aa9.38□□□□□ -0.91
CCNDBP1-203ENST00000562553 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
CCNDBP1-203ENST00000562553 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
CCNDBP1-203ENST00000562553 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
CCNDBP1-203ENST00000562553 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
CCNDBP1-203ENST00000562553 IGLV5-37A0A075B6J1 123 aa9.36□□□□□ -0.91
CCNDBP1-203ENST00000562553 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
CCNDBP1-203ENST00000562553 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
CCNDBP1-203ENST00000562553 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
CCNDBP1-203ENST00000562553 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
CCNDBP1-203ENST00000562553 GAGE10A6NGK3 116 aa9.35□□□□□ -0.91
CCNDBP1-203ENST00000562553 COX17Q14061 63 aa9.35□□□□□ -0.91
CCNDBP1-203ENST00000562553 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
CCNDBP1-203ENST00000562553 A0A0U1RRA0 63 aa9.34□□□□□ -0.91
CCNDBP1-203ENST00000562553 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
CCNDBP1-203ENST00000562553 DPM2O94777 84 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms