RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 FABP2P12104 132 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 ZNF25P17030 456 aaPredicted RBP1.72□□□□□ -2.13
SMG1-204ENST00000561940 SDC2P34741 201 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 MRPS36P82909 103 aaKnown RBP1.72□□□□□ -2.13
SMG1-204ENST00000561940 KLK9Q2XQG4 91 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 SLC25A26Q70HW3 274 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 TTC9CQ8N5M4 171 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 GRPEL2Q8TAA5 225 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 CARD19Q96LW7 228 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 C22orf24Q9Y442 160 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 TSTD3H0UI37 97 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 GABARAPH6UMI1 98 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 CDC42EP2O14613 210 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 IGLV3-1P01715 115 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 S100GP29377 79 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 S100A11P31949 105 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 DEFB131AP59861 70 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 SAMD13Q5VXD3 122 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 THEM6Q8WUY1 208 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 ARL11Q969Q4 196 aa1.71□□□□□ -2.14
SMG1-204ENST00000561940 NDUFA4O00483 81 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 HIST1H1BP16401 226 aaKnown RBP1.7□□□□□ -2.14
SMG1-204ENST00000561940 EVI2AP22794 236 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 RPS27P42677 84 aaKnown RBP1.7□□□□□ -2.14
SMG1-204ENST00000561940 MORN2Q502X0 79 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 TMEM128Q5BJH2 165 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 KRTAP26-1Q6PEX3 210 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 RHPN1-AS1Q9BWJ2 59 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 TMEM138Q9NPI0 162 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 V9GYS6 101 aa1.7□□□□□ -2.14
SMG1-204ENST00000561940 TMEM30CPA0ZSE6 113 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 YPEL1O60688 119 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 SULT1C4O75897 302 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 RBP2P50120 134 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 DEFA5Q01523 94 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 TMEM14EPQ6UXP3 125 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 Q8TAT8 98 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 TNFSF18Q9UNG2 199 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 TPRKBQ9Y3C4 175 aa1.69□□□□□ -2.14
SMG1-204ENST00000561940 PRH1P02810 166 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 GYPBP06028 91 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 DEFB130BP0DP73 79 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 DEFB130AP0DP74 79 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 POLR2JP52435 117 aaKnown RBP1.68□□□□□ -2.14
SMG1-204ENST00000561940 FXYD6P3P58550 94 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 PSG9Q00887 426 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 SPINK6Q6UWN8 80 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 OTOSQ8NHW6 89 aa1.68□□□□□ -2.14
SMG1-204ENST00000561940 H7BYZ3 331 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 FABP4P15090 132 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 OR5H6Q8NGV6 325 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 PP6455Q8WZ26 134 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 DIRC1Q969H9 104 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 LINC00846Q9NV44 126 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 HSPB8Q9UJY1 196 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 JPT1Q9UK76 154 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 HSPB11Q9Y547 144 aa1.67□□□□□ -2.14
SMG1-204ENST00000561940 A0A096LPF7 62 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 SAA2P0DJI9 122 aaPredicted RBP1.66□□□□□ -2.14
SMG1-204ENST00000561940 APELAP0DMC3 54 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 ETV6P41212 452 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 SELENOWP63302 87 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 VMA21Q3ZAQ7 101 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 LINC01590Q5TEZ4 76 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 RPL13AP3Q6NVV1 102 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 LINC00305Q7Z4B0 112 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 PRELID3AQ96N28 172 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 TRAPPC2LQ9UL33 140 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 LPAP08519 4548 aa1.66□□□□□ -2.14
SMG1-204ENST00000561940 A6NIN4 97 aa1.65□□□□□ -2.15
SMG1-204ENST00000561940 TPT1P13693 172 aaKnown RBP1.65□□□□□ -2.15
SMG1-204ENST00000561940 HLA-DRB4P13762 266 aa1.65□□□□□ -2.15
SMG1-204ENST00000561940 SNRPD3P62318 126 aaKnown RBP1.65□□□□□ -2.15
SMG1-204ENST00000561940 LYPD5Q6UWN5 251 aa1.65□□□□□ -2.15
SMG1-204ENST00000561940 TAF9BQ9HBM6 251 aa1.65□□□□□ -2.15
SMG1-204ENST00000561940 SPANXA1Q9NS26 97 aa1.65□□□□□ -2.15
SMG1-204ENST00000561940 RABAC1Q9UI14 185 aa1.65□□□□□ -2.15
SMG1-204ENST00000561940 TIMM8BQ9Y5J9 83 aaPredicted RBP1.65□□□□□ -2.15
SMG1-204ENST00000561940 HLA-DRB4X5D2U9 266 aa1.65□□□□□ -2.15
SMG1-204ENST00000561940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.64□□□□□ -2.15
SMG1-204ENST00000561940 A0A0J9YY99 117 aa1.64□□□□□ -2.15
SMG1-204ENST00000561940 MCRIP1C9JLW8 97 aa1.64□□□□□ -2.15
SMG1-204ENST00000561940 IFNGP01579 166 aa1.64□□□□□ -2.15
SMG1-204ENST00000561940 SMIM11AP58511 58 aa1.64□□□□□ -2.15
SMG1-204ENST00000561940 RPL39P5Q59GN2 51 aa1.64□□□□□ -2.15
SMG1-204ENST00000561940 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.64□□□□□ -2.15
SMG1-204ENST00000561940 OR5AK2Q8NH90 309 aa1.64□□□□□ -2.15
SMG1-204ENST00000561940 R4GMQ9 66 aa1.64□□□□□ -2.15
SMG1-204ENST00000561940 TRAV13-1A0A0B4J241 112 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 TRBV7-6A0A0J9YX20 115 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 TRBV27A0A0K0K1C4 114 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 C9orf170A2RU37 121 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 TRACP01848 142 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 SNRPGP62308 76 aaKnown RBP1.63□□□□□ -2.15
SMG1-204ENST00000561940 LSM3P62310 102 aaKnown RBP1.63□□□□□ -2.15
SMG1-204ENST00000561940 INSL4Q14641 139 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 PSMG4Q5JS54 123 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 HRCT1Q6UXD1 115 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 TMEM167AQ8TBQ9 72 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms