RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 IGKV2-29A2NJV5 120 aaPredicted RBP5.16□□□□□ -1.58
CDH1-203ENST00000561751 ZNF561-AS1K7EIQ3 104 aa5.16□□□□□ -1.58
CDH1-203ENST00000561751 IGKV2D-28P01615 120 aa5.16□□□□□ -1.58
CDH1-203ENST00000561751 IGHV3-23P01764 117 aa5.16□□□□□ -1.58
CDH1-203ENST00000561751 LINC00242Q5T6M2 205 aa5.16□□□□□ -1.58
CDH1-203ENST00000561751 LINC00337Q8N6G1 96 aa5.16□□□□□ -1.58
CDH1-203ENST00000561751 LINC00467Q9BRT7 94 aa5.16□□□□□ -1.58
CDH1-203ENST00000561751 IGHV3-35A0A0C4DH35 117 aa5.15□□□□□ -1.59
CDH1-203ENST00000561751 NCR3O14931 201 aa5.15□□□□□ -1.59
CDH1-203ENST00000561751 LECT2O14960 151 aa5.15□□□□□ -1.59
CDH1-203ENST00000561751 IGHV4-38-2P0DP08 117 aa5.15□□□□□ -1.59
CDH1-203ENST00000561751 FAM74A4Q5TZK3 123 aa5.15□□□□□ -1.59
CDH1-203ENST00000561751 C11orf44Q8N8P7 122 aa5.15□□□□□ -1.59
CDH1-203ENST00000561751 MOB4Q9Y3A3 225 aa5.15□□□□□ -1.59
CDH1-203ENST00000561751 PKDREJQ9NTG1 2253 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 TRBV6-4A0A1B0GX49 114 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3-53P01767 116 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 SAA4P35542 130 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 LINC01547P58512 204 aaPredicted RBP5.14□□□□□ -1.59
CDH1-203ENST00000561751 SNRPD3P62318 126 aaKnown RBP5.14□□□□□ -1.59
CDH1-203ENST00000561751 RPL36AP83881 106 aaKnown RBP5.14□□□□□ -1.59
CDH1-203ENST00000561751 C9orf129Q5T035 196 aaKnown RBP5.14□□□□□ -1.59
CDH1-203ENST00000561751 DGAT2L7PQ6IED9 249 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 Q6ZQT0 140 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 C6orf223Q8N319 242 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 Q8N814 137 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 RPL36ALQ969Q0 106 aaKnown RBP5.14□□□□□ -1.59
CDH1-203ENST00000561751 RMI2Q96E14 147 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 Q96MF0 132 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 C11orf68Q9H3H3 251 aaKnown RBP5.14□□□□□ -1.59
CDH1-203ENST00000561751 LINC00474Q9P2X8 69 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 TACC2O95359 2948 aa5.14□□□□□ -1.59
CDH1-203ENST00000561751 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3OR16-12A0A075B7B8 117 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3-66A0A0C4DH42 116 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 A8MZ25 164 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 K7EQD1 137 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 ADORA2A-AS1P86434 159 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 Q6ZTC4 211 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 MUC7Q8TAX7 377 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 FAM215AQ9Y5M1 114 aa5.13□□□□□ -1.59
CDH1-203ENST00000561751 PRRC2AP48634 2157 aaKnown RBP5.12□□□□□ -1.59
CDH1-203ENST00000561751 MED13LQ71F56 2210 aa5.12□□□□□ -1.59
CDH1-203ENST00000561751 A0A087WZ39 114 aa5.12□□□□□ -1.59
CDH1-203ENST00000561751 DEFB114Q30KQ6 69 aa5.12□□□□□ -1.59
CDH1-203ENST00000561751 ESM1Q9NQ30 184 aa5.12□□□□□ -1.59
CDH1-203ENST00000561751 NIPBLQ6KC79 2804 aaeCLIP5.12□□□□□ -1.59
CDH1-203ENST00000561751 AKAP9Q99996 3911 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 TRBV10-1A0A0K0K1A3 114 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 A8MTW9 85 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 E7EQL1 145 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 ATP6V0E1O15342 81 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 HOXD3P31249 432 aaPredicted RBP5.11□□□□□ -1.59
CDH1-203ENST00000561751 FUSP35637 526 aaKnown RBP eCLIP5.11□□□□□ -1.59
CDH1-203ENST00000561751 CCL18P55774 89 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 COX6A2Q02221 97 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 UNQ9165/PRO28630Q6UXU0 137 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 MRPL55Q7Z7F7 128 aaKnown RBP5.11□□□□□ -1.59
CDH1-203ENST00000561751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.11□□□□□ -1.59
CDH1-203ENST00000561751 TM2D3Q9BRN9 247 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 ARFGEF3Q5TH69 2177 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 ABCA4P78363 2273 aa5.11□□□□□ -1.59
CDH1-203ENST00000561751 DCHS2Q6V1P9 2916 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3OR16-8A0A075B7F1 116 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 TRAV10A0A0B4J240 114 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3-38A0A0C4DH36 116 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 A0A1B0GW54 56 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 hDV103S1A0JD37 113 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 TMEM89A2RUT3 159 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 PRYO14603 147 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 NDUFS5O43920 106 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 BSPH1Q075Z2 132 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 NREPQ16612 68 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 Q6ZVQ6 151 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 COX7B2Q8TF08 81 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
CDH1-203ENST00000561751 MALRD1Q5VYJ5 2156 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3OR16-13A0A075B7E8 117 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3-74A0A0B4J1X5 117 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 LCE6AA0A183 80 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 LY6HO94772 140 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 IGHV4-31P0DP07 118 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 DAD1P61803 113 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 ECSCRQ19T08 205 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 C11orf72Q8NBR9 251 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 RHPN1-AS1Q9BWJ2 59 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 BPESC1Q9GZL8 116 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 CDC42SE2Q9NRR3 84 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 MUC4Q99102 2169 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 NACAE9PAV3 2078 aa5.09□□□□□ -1.59
CDH1-203ENST00000561751 IGHV3-49A0A0A0MS15 119 aa5.08□□□□□ -1.6
CDH1-203ENST00000561751 C19orf84I3L1E1 186 aa5.08□□□□□ -1.6
CDH1-203ENST00000561751 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
CDH1-203ENST00000561751 CYP4F30PQ9H0H9 118 aa5.08□□□□□ -1.6
CDH1-203ENST00000561751 AKAP6Q13023 2319 aa5.08□□□□□ -1.6
CDH1-203ENST00000561751 MAP1AP78559 2803 aaPredicted RBP5.07□□□□□ -1.6
CDH1-203ENST00000561751 ROS1P08922 2347 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms