RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 BAGE3Q86Y29 109 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 C2orf48Q96LS8 159 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 CDKN2A-AS1Q9UH64 79 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 PKIGQ9Y2B9 76 aa6.44□□□□□ -1.38
HERC1-212ENST00000561348 HBDP02042 147 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 S100A2P29034 98 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 CKS1BP61024 79 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 SEC11AP67812 179 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 S100A12P80511 92 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 PMVKQ15126 192 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 GAGE2EQ4V326 116 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 CST9LQ9H4G1 147 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 GAGE2DQ9UEU5 116 aa6.43□□□□□ -1.38
HERC1-212ENST00000561348 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
HERC1-212ENST00000561348 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
HERC1-212ENST00000561348 LINC01549A6NIU2 74 aa6.42□□□□□ -1.38
HERC1-212ENST00000561348 NPSP0C0P6 89 aa6.42□□□□□ -1.38
HERC1-212ENST00000561348 C7orf33Q8WU49 177 aa6.42□□□□□ -1.38
HERC1-212ENST00000561348 LINC00474Q9P2X8 69 aa6.42□□□□□ -1.38
HERC1-212ENST00000561348 LINC01546A6NGU7 62 aa6.41□□□□□ -1.38
HERC1-212ENST00000561348 PCP4L1A6NKN8 68 aa6.41□□□□□ -1.38
HERC1-212ENST00000561348 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
HERC1-212ENST00000561348 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
HERC1-212ENST00000561348 HIST3H2BBQ8N257 126 aa6.41□□□□□ -1.38
HERC1-212ENST00000561348 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
HERC1-212ENST00000561348 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.38
HERC1-212ENST00000561348 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.38
HERC1-212ENST00000561348 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.38
HERC1-212ENST00000561348 H0Y8G0 127 aa6.4□□□□□ -1.38
HERC1-212ENST00000561348 HSBP1O75506 76 aa6.4□□□□□ -1.38
HERC1-212ENST00000561348 CIRBPQ14011 172 aaKnown RBP6.4□□□□□ -1.38
HERC1-212ENST00000561348 C9orf116Q5BN46 136 aaPredicted RBP6.4□□□□□ -1.38
HERC1-212ENST00000561348 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
HERC1-212ENST00000561348 FAM19A2Q8N3H0 131 aa6.4□□□□□ -1.38
HERC1-212ENST00000561348 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
HERC1-212ENST00000561348 PLAC8Q9NZF1 115 aa6.4□□□□□ -1.38
HERC1-212ENST00000561348 A0A096LNJ9 63 aa6.39□□□□□ -1.39
HERC1-212ENST00000561348 ATP5LO75964 103 aa6.39□□□□□ -1.39
HERC1-212ENST00000561348 KIAA0087Q14695 138 aa6.39□□□□□ -1.39
HERC1-212ENST00000561348 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
HERC1-212ENST00000561348 FAT1Q14517 4588 aa6.39□□□□□ -1.39
HERC1-212ENST00000561348 A0A1W2PNN7 141 aa6.38□□□□□ -1.39
HERC1-212ENST00000561348 F8WDY8 70 aa6.38□□□□□ -1.39
HERC1-212ENST00000561348 H3BRM9 83 aa6.38□□□□□ -1.39
HERC1-212ENST00000561348 RNF151Q2KHN1 245 aa6.38□□□□□ -1.39
HERC1-212ENST00000561348 TMEM170BQ5T4T1 132 aa6.38□□□□□ -1.39
HERC1-212ENST00000561348 FAM19A5Q7Z5A7 132 aaPredicted RBP6.38□□□□□ -1.39
HERC1-212ENST00000561348 CHCHD1Q96BP2 118 aaKnown RBP6.38□□□□□ -1.39
HERC1-212ENST00000561348 FABP4P15090 132 aa6.37□□□□□ -1.39
HERC1-212ENST00000561348 PDZD11Q5EBL8 140 aa6.37□□□□□ -1.39
HERC1-212ENST00000561348 Q6ZRP5 223 aa6.37□□□□□ -1.39
HERC1-212ENST00000561348 FAM19A3Q7Z5A8 133 aa6.37□□□□□ -1.39
HERC1-212ENST00000561348 Q8IZM0 81 aa6.37□□□□□ -1.39
HERC1-212ENST00000561348 LINC01561Q8N1V8 128 aa6.37□□□□□ -1.39
HERC1-212ENST00000561348 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
HERC1-212ENST00000561348 CHTOPQ9Y3Y2 248 aaKnown RBP6.37□□□□□ -1.39
HERC1-212ENST00000561348 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
HERC1-212ENST00000561348 FAM168BA1KXE4 195 aa6.36□□□□□ -1.39
HERC1-212ENST00000561348 SMIM1B2RUZ4 78 aa6.36□□□□□ -1.39
HERC1-212ENST00000561348 PYY3Q5JQD4 70 aa6.36□□□□□ -1.39
HERC1-212ENST00000561348 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
HERC1-212ENST00000561348 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
HERC1-212ENST00000561348 HIST1H2BLQ99880 126 aa6.36□□□□□ -1.39
HERC1-212ENST00000561348 F8VRH5 84 aa6.35□□□□□ -1.39
HERC1-212ENST00000561348 SERF1AO75920 110 aa6.35□□□□□ -1.39
HERC1-212ENST00000561348 HNRNPA3P51991 378 aaKnown RBP6.35□□□□□ -1.39
HERC1-212ENST00000561348 XAGE1AQ9HD64 81 aa6.35□□□□□ -1.39
HERC1-212ENST00000561348 C11orf86A6NJI1 115 aa6.34□□□□□ -1.39
HERC1-212ENST00000561348 NDUFC2-KCTD14E9PQ53 114 aa6.34□□□□□ -1.39
HERC1-212ENST00000561348 IGLC3P0DOY3 106 aa6.34□□□□□ -1.39
HERC1-212ENST00000561348 ZNF22P17026 224 aaPredicted RBP6.34□□□□□ -1.39
HERC1-212ENST00000561348 IGLV5-45A0A087WSX0 123 aa6.33□□□□□ -1.4
HERC1-212ENST00000561348 LEPROTL1O95214 131 aa6.33□□□□□ -1.4
HERC1-212ENST00000561348 PFN2P35080 140 aa6.33□□□□□ -1.4
HERC1-212ENST00000561348 CXCL5P42830 114 aa6.33□□□□□ -1.4
HERC1-212ENST00000561348 KRTAP10-4P60372 401 aaPredicted RBP6.33□□□□□ -1.4
HERC1-212ENST00000561348 UBE2BP63146 152 aa6.33□□□□□ -1.4
HERC1-212ENST00000561348 JOSD1Q15040 202 aaPredicted RBP6.33□□□□□ -1.4
HERC1-212ENST00000561348 ZNF625Q96I27 306 aaPredicted RBP6.33□□□□□ -1.4
HERC1-212ENST00000561348 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
HERC1-212ENST00000561348 NUPR1O60356 82 aa6.32□□□□□ -1.4
HERC1-212ENST00000561348 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
HERC1-212ENST00000561348 PRR3P79522 188 aaKnown RBP6.32□□□□□ -1.4
HERC1-212ENST00000561348 M0QXV9 152 aa6.31□□□□□ -1.4
HERC1-212ENST00000561348 C1orf137Q5JT78 98 aa6.31□□□□□ -1.4
HERC1-212ENST00000561348 C9orf129Q5T035 196 aaKnown RBP6.31□□□□□ -1.4
HERC1-212ENST00000561348 A0A0U1RRA0 63 aa6.3□□□□□ -1.4
HERC1-212ENST00000561348 LINC00310P59036 64 aa6.3□□□□□ -1.4
HERC1-212ENST00000561348 PMCHL2Q9BQD1 86 aa6.3□□□□□ -1.4
HERC1-212ENST00000561348 HSPB8Q9UJY1 196 aa6.3□□□□□ -1.4
HERC1-212ENST00000561348 TRAV12-1A0A0B4J245 112 aa6.29□□□□□ -1.4
HERC1-212ENST00000561348 LINC00587B1AMM8 73 aa6.29□□□□□ -1.4
HERC1-212ENST00000561348 SERTAD4-AS1Q5TG53 156 aa6.29□□□□□ -1.4
HERC1-212ENST00000561348 PSORS1C2Q9UIG4 136 aa6.29□□□□□ -1.4
HERC1-212ENST00000561348 TSTD3H0UI37 97 aa6.28□□□□□ -1.4
HERC1-212ENST00000561348 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
HERC1-212ENST00000561348 IGLV5-39A0A0G2JS06 123 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms