RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CDKN2A-AS1Q9UH64 79 aa4.61□□□□□ -1.67
CTDSPL2-210ENST00000560834 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
CTDSPL2-210ENST00000560834 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 GVQW2A0A096LPI5 108 aaPredicted RBP4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 IGHV1-58A0A0C4DH39 117 aa4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 SMIM1B2RUZ4 78 aa4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 SYS1-DBNDD2H3BUS1 97 aa4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 SEC11AP67812 179 aa4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 LINC00469Q8N7U9 141 aa4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 PMCHL2Q9BQD1 86 aa4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 MAP1LC3CQ9BXW4 147 aa4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 GEMIN7Q9H840 131 aaKnown RBP4.6□□□□□ -1.67
CTDSPL2-210ENST00000560834 LRP1BQ9NZR2 4599 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 IGHV3-64A0A075B6Q5 118 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 S100A2P29034 98 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 KRTAP10-2P60368 255 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 HIGD2BQ4VC39 106 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 LINC01545Q5VT33 79 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 LINC01561Q8N1V8 128 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 DNAH8Q96JB1 4490 aa4.59□□□□□ -1.67
CTDSPL2-210ENST00000560834 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 PLNP26678 52 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 FUSP35637 526 aaKnown RBP eCLIP4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 KRTDAPP60985 99 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 SPAG11BQ08648 103 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 KIAA0087Q14695 138 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 PET117Q6UWS5 81 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 OR10D4PQ8NGN7 298 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 ORAOV1Q8WV07 137 aa4.58□□□□□ -1.68
CTDSPL2-210ENST00000560834 IGLV5-39A0A0G2JS06 123 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 hDV102S1A0JD36 115 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 TMEM223A0PJW6 202 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 DPM2O94777 84 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 APOMO95445 188 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 IGKCP01834 107 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 SLPIP03973 132 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 SPINK8P0C7L1 97 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 CNBPP62633 177 aaKnown RBP4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 TMEM170BQ5T4T1 132 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 CFAP161Q6P656 301 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
CTDSPL2-210ENST00000560834 APOBP04114 4563 aaKnown RBP4.56□□□□□ -1.68
CTDSPL2-210ENST00000560834 H3BRM9 83 aa4.56□□□□□ -1.68
CTDSPL2-210ENST00000560834 Q8IZM0 81 aa4.56□□□□□ -1.68
CTDSPL2-210ENST00000560834 IGLV5-52A0A0A0MRZ9 124 aa4.55□□□□□ -1.68
CTDSPL2-210ENST00000560834 C20orf202A1L168 122 aa4.55□□□□□ -1.68
CTDSPL2-210ENST00000560834 TSPEAR-AS2P59090 65 aa4.55□□□□□ -1.68
CTDSPL2-210ENST00000560834 Q6ZRU5 148 aa4.55□□□□□ -1.68
CTDSPL2-210ENST00000560834 COX7B2Q8TF08 81 aa4.55□□□□□ -1.68
CTDSPL2-210ENST00000560834 C2orf48Q96LS8 159 aa4.55□□□□□ -1.68
CTDSPL2-210ENST00000560834 C10orf25Q5T742 122 aa4.54□□□□□ -1.68
CTDSPL2-210ENST00000560834 C2orf82Q6UX34 121 aa4.54□□□□□ -1.68
CTDSPL2-210ENST00000560834 ATOH7Q8N100 152 aa4.54□□□□□ -1.68
CTDSPL2-210ENST00000560834 CARD19Q96LW7 228 aa4.54□□□□□ -1.68
CTDSPL2-210ENST00000560834 TOMM7Q9P0U1 55 aa4.54□□□□□ -1.68
CTDSPL2-210ENST00000560834 C6orf48Q9UBA6 75 aa4.54□□□□□ -1.68
CTDSPL2-210ENST00000560834 E9PLD3 99 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 F8WDY8 70 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 NDUFA1O15239 70 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 PRSS2P07478 247 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 CXCL5P42830 114 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 SYCNQ0VAF6 134 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 LINC01620Q4KN68 170 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 UNQ6190/PRO20217Q6UXQ8 127 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 C9orf163Q8N9P6 203 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 CAMK2N2Q96S95 79 aa4.53□□□□□ -1.68
CTDSPL2-210ENST00000560834 IGKV2D-26A0A0A0MRZ7 120 aa4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 C16orf90A8MZG2 172 aa4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 LEPROTO15243 131 aa4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 KRTAP10-1P60331 282 aa4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 HERVK_113P61574 105 aa4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 STPG4Q8N801 248 aa4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 ZNF625Q96I27 306 aaPredicted RBP4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 BIRC6Q9NR09 4857 aa4.52□□□□□ -1.69
CTDSPL2-210ENST00000560834 TRBV30A0A0K0K1B3 111 aa4.51□□□□□ -1.69
CTDSPL2-210ENST00000560834 PCP4P48539 62 aa4.51□□□□□ -1.69
CTDSPL2-210ENST00000560834 AKR1D1P51857 326 aa4.51□□□□□ -1.69
CTDSPL2-210ENST00000560834 CKS1BP61024 79 aa4.51□□□□□ -1.69
CTDSPL2-210ENST00000560834 JOSD1Q15040 202 aaPredicted RBP4.51□□□□□ -1.69
CTDSPL2-210ENST00000560834 MAJINQ3KP22 176 aa4.51□□□□□ -1.69
CTDSPL2-210ENST00000560834 C6orf226Q5I0X4 101 aa4.51□□□□□ -1.69
CTDSPL2-210ENST00000560834 A0A096LNI7 61 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 PANO1I0J062 215 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 J3QQQ9 107 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 SCGB1D1O95968 90 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 TLX1NBP0CAT3 122 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 C9orf116Q5BN46 136 aaPredicted RBP4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 PYY3Q5JQD4 70 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 SDIM1Q6ZPB5 146 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 Q6ZSA8 131 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 PLEKHB2Q96CS7 222 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 HSPG2P98160 4391 aa4.5□□□□□ -1.69
CTDSPL2-210ENST00000560834 LOC107984640A0A0U1RRK4 108 aa4.49□□□□□ -1.69
CTDSPL2-210ENST00000560834 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
CTDSPL2-210ENST00000560834 CIRBPQ14011 172 aaKnown RBP4.49□□□□□ -1.69
CTDSPL2-210ENST00000560834 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms