RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 C1orf195Q5TG92 126 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 DEFB124Q8NES8 71 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 Q9UF83 564 aa3.56□□□□□ -1.84
TPM1-222ENST00000560131 LAMA1P25391 3075 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 VCANP13611 3396 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 A0A096LNT2 108 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 F8WEM9 126 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 MIFP14174 115 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 DEFB114Q30KQ6 69 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 Q8IZM0 81 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 CNOT1A5YKK6 2376 aaKnown RBP3.55□□□□□ -1.84
TPM1-222ENST00000560131 ZDBF2Q9HCK1 2354 aa3.55□□□□□ -1.84
TPM1-222ENST00000560131 MED13LQ71F56 2210 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 H3BUX3 64 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 CCL21O00585 134 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 UBE2L6O14933 153 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 IGKV3-20P01619 116 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 KRTAP24-1Q3LI83 254 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 LINC00575Q6W349 94 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 PRR15Q8IV56 129 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 DYNLRB2Q8TF09 96 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 ANKHD1Q8IWZ3 2542 aaKnown RBP3.54□□□□□ -1.84
TPM1-222ENST00000560131 CEP250Q9BV73 2442 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 APC2O95996 2303 aa3.54□□□□□ -1.84
TPM1-222ENST00000560131 GPR179Q6PRD1 2367 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 A0A1B0GW54 56 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 PLAC8L1A1L4L8 177 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 NBL1P41271 181 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 DEFB131AP59861 70 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 Q6ZRU5 148 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 SPATA3Q8NHX4 192 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 TMEM254Q8TBM7 123 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 RMI2Q96E14 147 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 BPESC1Q9GZL8 116 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 DHRS4-AS1Q9P1J3 65 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 WDFY3Q8IZQ1 3526 aa3.53□□□□□ -1.84
TPM1-222ENST00000560131 NBEAQ8NFP9 2946 aa3.52□□□□□ -1.85
TPM1-222ENST00000560131 TRAV10A0A0B4J240 114 aa3.52□□□□□ -1.85
TPM1-222ENST00000560131 A0A0U1RQV1 116 aa3.52□□□□□ -1.85
TPM1-222ENST00000560131 LCE6AA0A183 80 aa3.52□□□□□ -1.85
TPM1-222ENST00000560131 ESRGQ1W209 222 aa3.52□□□□□ -1.85
TPM1-222ENST00000560131 WFDC9Q8NEX5 89 aa3.52□□□□□ -1.85
TPM1-222ENST00000560131 PCNX1Q96RV3 2341 aa3.52□□□□□ -1.85
TPM1-222ENST00000560131 TRBV6-8A0A0A6YYG3 113 aa3.51□□□□□ -1.85
TPM1-222ENST00000560131 CMC4P56277 68 aaPredicted RBP3.51□□□□□ -1.85
TPM1-222ENST00000560131 LY6EQ16553 131 aa3.51□□□□□ -1.85
TPM1-222ENST00000560131 NREPQ16612 68 aa3.51□□□□□ -1.85
TPM1-222ENST00000560131 Q1T7F1 81 aa3.51□□□□□ -1.85
TPM1-222ENST00000560131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.51□□□□□ -1.85
TPM1-222ENST00000560131 RP1L1Q8IWN7 2480 aaPredicted RBP3.5□□□□□ -1.85
TPM1-222ENST00000560131 TRGV1A0A0A0MS02 117 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 LINC00959A0A1B0GUT2 108 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 A0A1W2PPR1 153 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 BRD3OSQ6XYD6 125 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 Q6ZTC4 211 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 Q6ZTI0 123 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 Q8N377 158 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 WFDC11Q8NEX6 87 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 TOMM7Q9P0U1 55 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 PKIGQ9Y2B9 76 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 SNURFQ9Y675 71 aa3.5□□□□□ -1.85
TPM1-222ENST00000560131 TRIOO75962 3097 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 BPY2O14599 106 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 IGLV6-57P01721 117 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 HTN1P15515 57 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 COX7BP24311 80 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 FUSP35637 526 aaKnown RBP eCLIP3.49□□□□□ -1.85
TPM1-222ENST00000560131 HAMPP81172 84 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 KIAA0087Q14695 138 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 C6orf99Q4VX62 202 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 C16orf74Q96GX8 76 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 TM2D3Q9BRN9 247 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 CELA1Q9UNI1 258 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
TPM1-222ENST00000560131 CACNA1HO95180 2353 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 ABCA2Q9BZC7 2435 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 SPEGQ15772 3267 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 IGLV4-60A0A075B6I1 120 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 hDV103S1A0JD37 113 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 C19orf84I3L1E1 186 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 ZZEF1O43149 2961 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 MSMBP08118 114 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 C4orf3Q8WVX3 66 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 C11orf68Q9H3H3 251 aaKnown RBP3.48□□□□□ -1.85
TPM1-222ENST00000560131 PTPRQQ9UMZ3 2332 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 MYO15AQ9UKN7 3530 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 NCOR1O75376 2440 aa3.48□□□□□ -1.85
TPM1-222ENST00000560131 EP300Q09472 2414 aaPredicted RBP3.48□□□□□ -1.85
TPM1-222ENST00000560131 TRIOBPQ9H2D6 2365 aa3.47□□□□□ -1.85
TPM1-222ENST00000560131 MAP1BP46821 2468 aaKnown RBP3.47□□□□□ -1.85
TPM1-222ENST00000560131 GVQW2A0A096LPI5 108 aaPredicted RBP3.47□□□□□ -1.85
TPM1-222ENST00000560131 A0A0J9YWU9 116 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms