RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 RPL18AQ02543 176 aaKnown RBP5.44□□□□□ -1.54
USP3-217ENST00000560070 KIAA0087Q14695 138 aa5.44□□□□□ -1.54
USP3-217ENST00000560070 CHCHD1Q96BP2 118 aaKnown RBP5.44□□□□□ -1.54
USP3-217ENST00000560070 PACRGQ96M98 296 aaPredicted RBP5.44□□□□□ -1.54
USP3-217ENST00000560070 H0Y8G0 127 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 NDUFA1O15239 70 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 NUPR1O60356 82 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 HSBP1O75506 76 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 SERF1AO75920 110 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 ATP5LO75964 103 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 CKS1BP61024 79 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
USP3-217ENST00000560070 FAM19A3Q7Z5A8 133 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 C6orf48Q9UBA6 75 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 HSPG2P98160 4391 aa5.43□□□□□ -1.54
USP3-217ENST00000560070 APOBP04114 4563 aaKnown RBP5.42□□□□□ -1.54
USP3-217ENST00000560070 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
USP3-217ENST00000560070 FABP4P15090 132 aa5.42□□□□□ -1.54
USP3-217ENST00000560070 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
USP3-217ENST00000560070 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
USP3-217ENST00000560070 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
USP3-217ENST00000560070 A0A1W2PNN7 141 aa5.41□□□□□ -1.54
USP3-217ENST00000560070 SMIM1B2RUZ4 78 aa5.41□□□□□ -1.54
USP3-217ENST00000560070 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
USP3-217ENST00000560070 RPL37AP61513 92 aaKnown RBP5.41□□□□□ -1.54
USP3-217ENST00000560070 CIRBPQ14011 172 aaKnown RBP5.41□□□□□ -1.54
USP3-217ENST00000560070 TMEM170BQ5T4T1 132 aa5.41□□□□□ -1.54
USP3-217ENST00000560070 COX7B2Q8TF08 81 aa5.41□□□□□ -1.54
USP3-217ENST00000560070 IFI27L1Q96BM0 104 aa5.41□□□□□ -1.54
USP3-217ENST00000560070 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
USP3-217ENST00000560070 CHTOPQ9Y3Y2 248 aaKnown RBP5.41□□□□□ -1.54
USP3-217ENST00000560070 F8WDY8 70 aa5.4□□□□□ -1.54
USP3-217ENST00000560070 LINC00310P59036 64 aa5.4□□□□□ -1.54
USP3-217ENST00000560070 RNF151Q2KHN1 245 aa5.4□□□□□ -1.54
USP3-217ENST00000560070 C4orf48Q5BLP8 95 aa5.4□□□□□ -1.54
USP3-217ENST00000560070 Q6ZRP5 223 aa5.4□□□□□ -1.54
USP3-217ENST00000560070 PLAC8Q9NZF1 115 aa5.4□□□□□ -1.54
USP3-217ENST00000560070 LINC00474Q9P2X8 69 aa5.4□□□□□ -1.54
USP3-217ENST00000560070 C11orf86A6NJI1 115 aa5.39□□□□□ -1.55
USP3-217ENST00000560070 H3BRM9 83 aa5.39□□□□□ -1.55
USP3-217ENST00000560070 LEPROTL1O95214 131 aa5.39□□□□□ -1.55
USP3-217ENST00000560070 IGLC3P0DOY3 106 aa5.39□□□□□ -1.55
USP3-217ENST00000560070 ZNF22P17026 224 aaPredicted RBP5.39□□□□□ -1.55
USP3-217ENST00000560070 Q8IZM0 81 aa5.39□□□□□ -1.55
USP3-217ENST00000560070 PKIGQ9Y2B9 76 aa5.39□□□□□ -1.55
USP3-217ENST00000560070 DNAH8Q96JB1 4490 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
USP3-217ENST00000560070 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 PMCHL2Q9BQD1 86 aa5.38□□□□□ -1.55
USP3-217ENST00000560070 TRAV12-1A0A0B4J245 112 aa5.37□□□□□ -1.55
USP3-217ENST00000560070 TRBV30A0A0K0K1B3 111 aa5.37□□□□□ -1.55
USP3-217ENST00000560070 F8VRH5 84 aa5.37□□□□□ -1.55
USP3-217ENST00000560070 ATP6V1G1O75348 118 aa5.37□□□□□ -1.55
USP3-217ENST00000560070 S100A1P23297 94 aa5.37□□□□□ -1.55
USP3-217ENST00000560070 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
USP3-217ENST00000560070 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
USP3-217ENST00000560070 ZNF625Q96I27 306 aaPredicted RBP5.37□□□□□ -1.55
USP3-217ENST00000560070 NDUFC2-KCTD14E9PQ53 114 aa5.36□□□□□ -1.55
USP3-217ENST00000560070 KRTAP10-4P60372 401 aaPredicted RBP5.36□□□□□ -1.55
USP3-217ENST00000560070 XAGE1AQ9HD64 81 aa5.36□□□□□ -1.55
USP3-217ENST00000560070 HSPB8Q9UJY1 196 aa5.36□□□□□ -1.55
USP3-217ENST00000560070 TLX1NBP0CAT3 122 aa5.35□□□□□ -1.55
USP3-217ENST00000560070 PFN2P35080 140 aa5.35□□□□□ -1.55
USP3-217ENST00000560070 HNRNPA3P51991 378 aaKnown RBP5.35□□□□□ -1.55
USP3-217ENST00000560070 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
USP3-217ENST00000560070 IGLV5-39A0A0G2JS06 123 aa5.34□□□□□ -1.55
USP3-217ENST00000560070 A0A0U1RRA0 63 aa5.34□□□□□ -1.55
USP3-217ENST00000560070 TMEM223A0PJW6 202 aa5.34□□□□□ -1.55
USP3-217ENST00000560070 CXCL5P42830 114 aa5.34□□□□□ -1.55
USP3-217ENST00000560070 ODF1Q14990 250 aa5.34□□□□□ -1.55
USP3-217ENST00000560070 ABCA13Q86UQ4 5058 aa5.34□□□□□ -1.56
USP3-217ENST00000560070 FAT1Q14517 4588 aa5.33□□□□□ -1.56
USP3-217ENST00000560070 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
USP3-217ENST00000560070 MAP1LC3CQ9BXW4 147 aa5.33□□□□□ -1.56
USP3-217ENST00000560070 UBE2BP63146 152 aa5.32□□□□□ -1.56
USP3-217ENST00000560070 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
USP3-217ENST00000560070 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
USP3-217ENST00000560070 M0QXV9 152 aa5.31□□□□□ -1.56
USP3-217ENST00000560070 DPM2O94777 84 aa5.31□□□□□ -1.56
USP3-217ENST00000560070 IGKCP01834 107 aa5.31□□□□□ -1.56
USP3-217ENST00000560070 LINC00158P58513 81 aa5.31□□□□□ -1.56
USP3-217ENST00000560070 ERG28Q9UKR5 140 aa5.31□□□□□ -1.56
USP3-217ENST00000560070 C22orf24Q9Y442 160 aa5.31□□□□□ -1.56
USP3-217ENST00000560070 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
USP3-217ENST00000560070 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
USP3-217ENST00000560070 GAGE10A6NGK3 116 aa5.3□□□□□ -1.56
USP3-217ENST00000560070 SYS1-DBNDD2H3BUS1 97 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms