RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 LGALS3P17931 250 aaKnown RBP13.59□□□□□ -0.23
PSEN1-225ENST00000560005 LINC01561Q8N1V8 128 aa13.59□□□□□ -0.23
PSEN1-225ENST00000560005 CDKN2A-AS1Q9UH64 79 aa13.59□□□□□ -0.23
PSEN1-225ENST00000560005 LRCOL1A6NCL2 159 aa13.58□□□□□ -0.24
PSEN1-225ENST00000560005 CRPP02741 224 aa13.58□□□□□ -0.24
PSEN1-225ENST00000560005 COX6A2Q02221 97 aa13.58□□□□□ -0.24
PSEN1-225ENST00000560005 PRR34Q9NV39 138 aa13.58□□□□□ -0.24
PSEN1-225ENST00000560005 J3QQQ9 107 aa13.57□□□□□ -0.24
PSEN1-225ENST00000560005 PSCAO43653 123 aa13.57□□□□□ -0.24
PSEN1-225ENST00000560005 LINC00528Q8N1L1 170 aa13.57□□□□□ -0.24
PSEN1-225ENST00000560005 KLK12Q9UKR0 248 aa13.57□□□□□ -0.24
PSEN1-225ENST00000560005 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
PSEN1-225ENST00000560005 IGHV3-30P01768 117 aa13.56□□□□□ -0.24
PSEN1-225ENST00000560005 IGHV3-33P01772 117 aa13.56□□□□□ -0.24
PSEN1-225ENST00000560005 IGHV3-30-3P0DP02 117 aa13.56□□□□□ -0.24
PSEN1-225ENST00000560005 IGHV3-30-5P0DP03 117 aa13.56□□□□□ -0.24
PSEN1-225ENST00000560005 PCP2Q8IVA1 136 aa13.56□□□□□ -0.24
PSEN1-225ENST00000560005 PLA2G2DQ9UNK4 145 aa13.56□□□□□ -0.24
PSEN1-225ENST00000560005 IGHV3OR16-9A0A0B4J2B5 98 aa13.55□□□□□ -0.24
PSEN1-225ENST00000560005 MIAQ16674 131 aa13.55□□□□□ -0.24
PSEN1-225ENST00000560005 CD164L2Q6UWJ8 174 aa13.55□□□□□ -0.24
PSEN1-225ENST00000560005 Q8N814 137 aa13.55□□□□□ -0.24
PSEN1-225ENST00000560005 HIGD1BQ9P298 99 aa13.55□□□□□ -0.24
PSEN1-225ENST00000560005 A0A087WZ39 114 aa13.54□□□□□ -0.24
PSEN1-225ENST00000560005 IGLV5-39A0A0G2JS06 123 aa13.53□□□□□ -0.24
PSEN1-225ENST00000560005 ZNF815PA8K554 130 aa13.53□□□□□ -0.24
PSEN1-225ENST00000560005 SPINK8P0C7L1 97 aa13.53□□□□□ -0.24
PSEN1-225ENST00000560005 C10orf126Q8N4M7 172 aa13.53□□□□□ -0.24
PSEN1-225ENST00000560005 CHCHD10Q8WYQ3 142 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-225ENST00000560005 SMIM1B2RUZ4 78 aa13.51□□□□□ -0.25
PSEN1-225ENST00000560005 XCL1P47992 114 aa13.51□□□□□ -0.25
PSEN1-225ENST00000560005 CLPSL2Q6UWE3 100 aa13.51□□□□□ -0.25
PSEN1-225ENST00000560005 UBE2WQ96B02 151 aa13.51□□□□□ -0.25
PSEN1-225ENST00000560005 TRAV8-3A0A0A6YYJ7 113 aa13.5□□□□□ -0.25
PSEN1-225ENST00000560005 COX7A2LO14548 114 aa13.5□□□□□ -0.25
PSEN1-225ENST00000560005 ENHOQ6UWT2 76 aa13.5□□□□□ -0.25
PSEN1-225ENST00000560005 Q8N3U1 123 aa13.5□□□□□ -0.25
PSEN1-225ENST00000560005 IGHV3-64A0A075B6Q5 118 aa13.49□□□□□ -0.25
PSEN1-225ENST00000560005 SFTA2Q6UW10 78 aa13.49□□□□□ -0.25
PSEN1-225ENST00000560005 SCGB1D4Q6XE38 83 aa13.49□□□□□ -0.25
PSEN1-225ENST00000560005 LINC00587B1AMM8 73 aa13.48□□□□□ -0.25
PSEN1-225ENST00000560005 APOMO95445 188 aa13.48□□□□□ -0.25
PSEN1-225ENST00000560005 CTAG1AP78358 180 aa13.48□□□□□ -0.25
PSEN1-225ENST00000560005 Q6ZSA8 131 aa13.48□□□□□ -0.25
PSEN1-225ENST00000560005 MALP21145 153 aa13.47□□□□□ -0.25
PSEN1-225ENST00000560005 C5orf38Q86SI9 138 aa13.47□□□□□ -0.25
PSEN1-225ENST00000560005 RMI2Q96E14 147 aa13.47□□□□□ -0.25
PSEN1-225ENST00000560005 TTTY13Q9BZ97 58 aa13.47□□□□□ -0.25
PSEN1-225ENST00000560005 Q9HAA7 133 aa13.47□□□□□ -0.25
PSEN1-225ENST00000560005 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
PSEN1-225ENST00000560005 M0R143 59 aa13.46□□□□□ -0.25
PSEN1-225ENST00000560005 TAL2Q16559 108 aa13.46□□□□□ -0.25
PSEN1-225ENST00000560005 C2orf91Q6ZV80 131 aa13.46□□□□□ -0.25
PSEN1-225ENST00000560005 IGLV10-54A0A075B6I4 117 aa13.45□□□□□ -0.26
PSEN1-225ENST00000560005 GAGE12HA6NDE8 117 aa13.45□□□□□ -0.26
PSEN1-225ENST00000560005 IBA57-AS1B1ANH7 110 aa13.45□□□□□ -0.26
PSEN1-225ENST00000560005 TSPEAR-AS2P59090 65 aa13.45□□□□□ -0.26
PSEN1-225ENST00000560005 HERV-K104P63124 156 aa13.45□□□□□ -0.26
PSEN1-225ENST00000560005 COX7B2Q8TF08 81 aa13.45□□□□□ -0.26
PSEN1-225ENST00000560005 C1orf43Q9BWL3 253 aa13.45□□□□□ -0.26
PSEN1-225ENST00000560005 NDUFA1O15239 70 aa13.44□□□□□ -0.26
PSEN1-225ENST00000560005 OXTP01178 125 aa13.44□□□□□ -0.26
PSEN1-225ENST00000560005 HSD52Q0P140 79 aa13.44□□□□□ -0.26
PSEN1-225ENST00000560005 PRSS2P07478 247 aa13.43□□□□□ -0.26
PSEN1-225ENST00000560005 FOXI1Q12951 378 aa13.43□□□□□ -0.26
PSEN1-225ENST00000560005 CIRBPQ14011 172 aaKnown RBP13.42□□□□□ -0.26
PSEN1-225ENST00000560005 COX11Q9Y6N1 276 aa13.42□□□□□ -0.26
PSEN1-225ENST00000560005 PKHD1L1Q86WI1 4243 aa13.41□□□□□ -0.26
PSEN1-225ENST00000560005 CXCL5P42830 114 aa13.41□□□□□ -0.26
PSEN1-225ENST00000560005 KRTAP10-4P60372 401 aaPredicted RBP13.41□□□□□ -0.26
PSEN1-225ENST00000560005 WFDC2Q14508 124 aa13.41□□□□□ -0.26
PSEN1-225ENST00000560005 C6orf226Q5I0X4 101 aa13.41□□□□□ -0.26
PSEN1-225ENST00000560005 Q8IZM0 81 aa13.41□□□□□ -0.26
PSEN1-225ENST00000560005 TMEM238C9JI98 176 aa13.4□□□□□ -0.26
PSEN1-225ENST00000560005 TIMM17BO60830 172 aa13.4□□□□□ -0.26
PSEN1-225ENST00000560005 LBHQ53QV2 105 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-225ENST00000560005 SCXQ7RTU7 201 aa13.4□□□□□ -0.26
PSEN1-225ENST00000560005 SPANXB1Q9NS25 103 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-225ENST00000560005 TOMM7Q9P0U1 55 aa13.4□□□□□ -0.26
PSEN1-225ENST00000560005 SRSF9Q13242 221 aaKnown RBP eCLIP13.39□□□□□ -0.27
PSEN1-225ENST00000560005 CFAP161Q6P656 301 aa13.39□□□□□ -0.27
PSEN1-225ENST00000560005 Q6ZVH6 145 aa13.39□□□□□ -0.27
PSEN1-225ENST00000560005 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
PSEN1-225ENST00000560005 TP73-AS1Q9UF72 201 aa13.39□□□□□ -0.27
PSEN1-225ENST00000560005 RNF213Q63HN8 5207 aa13.38□□□□□ -0.27
PSEN1-225ENST00000560005 A0A0J9YXY3 114 aa13.38□□□□□ -0.27
PSEN1-225ENST00000560005 ORAOV1Q8WV07 137 aa13.38□□□□□ -0.27
PSEN1-225ENST00000560005 IGKV2D-24A0A075B6R9 120 aa13.37□□□□□ -0.27
PSEN1-225ENST00000560005 ZNF625Q96I27 306 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-225ENST00000560005 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.36□□□□□ -0.27
PSEN1-225ENST00000560005 CKS1BP61024 79 aa13.36□□□□□ -0.27
PSEN1-225ENST00000560005 LINC01620Q4KN68 170 aa13.36□□□□□ -0.27
PSEN1-225ENST00000560005 COPS9Q8WXC6 57 aa13.36□□□□□ -0.27
PSEN1-225ENST00000560005 TM2D2Q9BX73 214 aa13.36□□□□□ -0.27
PSEN1-225ENST00000560005 LECT2O14960 151 aa13.35□□□□□ -0.27
PSEN1-225ENST00000560005 HINT1P49773 126 aaPredicted RBP13.35□□□□□ -0.27
PSEN1-225ENST00000560005 F8WDY8 70 aa13.34□□□□□ -0.27
PSEN1-225ENST00000560005 BVES-AS1Q5T3Y7 98 aa13.34□□□□□ -0.27
PSEN1-225ENST00000560005 KRTAP26-1Q6PEX3 210 aa13.34□□□□□ -0.27
PSEN1-225ENST00000560005 SNHG12Q9BXW3 62 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms