RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TTTY13Q9BZ97 58 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 CDKN2A-AS1Q9UH64 79 aa3.45□□□□□ -1.86
SPG11-220ENST00000559933 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 TINCRA0A1B0GVN0 87 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 SMIM1B2RUZ4 78 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 DPM2O94777 84 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 IGKCP01834 107 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 SS18Q15532 418 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 TMEM170BQ5T4T1 132 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 Q6ZRN7 208 aaPredicted RBP3.44□□□□□ -1.86
SPG11-220ENST00000559933 C10orf126Q8N4M7 172 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 C15orf56Q8N910 161 aa3.44□□□□□ -1.86
SPG11-220ENST00000559933 GEMIN7Q9H840 131 aaKnown RBP3.44□□□□□ -1.86
SPG11-220ENST00000559933 HERC2O95714 4834 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 IGLV5-45A0A087WSX0 123 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 IGKV2D-26A0A0A0MRZ7 120 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 IGHV3OR16-9A0A0B4J2B5 98 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 TMEM223A0PJW6 202 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 C20orf202A1L168 122 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 LINC01549A6NIU2 74 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 USP17L23D6RBM5 183 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 COX7A2LO14548 114 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 RTL8CO15255 209 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 SMAGPQ0VAQ4 97 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 JOSD1Q15040 202 aaPredicted RBP3.43□□□□□ -1.86
SPG11-220ENST00000559933 MIAQ16674 131 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 TTC32Q5I0X7 151 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 PAPPA-AS1Q5QFB9 102 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 CD164L2Q6UWJ8 174 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 FAM19A3Q7Z5A8 133 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 NFE4Q86UQ8 179 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 C6orf223Q8N319 242 aa3.43□□□□□ -1.86
SPG11-220ENST00000559933 TRAV9-2A0A087WT02 112 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 A0A087WZ39 114 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 PSCAO43653 123 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 PLNP26678 52 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 HERVK_113P63121 156 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 SPAG11BQ08648 103 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 C2orf82Q6UX34 121 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 ORAOV1Q8WV07 137 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 PAM16Q9Y3D7 125 aa3.42□□□□□ -1.86
SPG11-220ENST00000559933 PKD1P98161 4303 aa3.41□□□□□ -1.86
SPG11-220ENST00000559933 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.41□□□□□ -1.86
SPG11-220ENST00000559933 TRAV8-4A0A0B4J246 113 aa3.41□□□□□ -1.86
SPG11-220ENST00000559933 LRCOL1A6NCL2 159 aa3.41□□□□□ -1.86
SPG11-220ENST00000559933 NMUP48645 174 aa3.41□□□□□ -1.86
SPG11-220ENST00000559933 LINC01620Q4KN68 170 aa3.41□□□□□ -1.86
SPG11-220ENST00000559933 C1orf134Q5TEV5 83 aa3.41□□□□□ -1.86
SPG11-220ENST00000559933 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
SPG11-220ENST00000559933 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.86
SPG11-220ENST00000559933 IGHV1-58A0A0C4DH39 117 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 IGLV5-39A0A0G2JS06 123 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 SEC11AP67812 179 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 KIAA0087Q14695 138 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 SPATA45Q537H7 98 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 C9orf116Q5BN46 136 aaPredicted RBP3.4□□□□□ -1.87
SPG11-220ENST00000559933 C10orf25Q5T742 122 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 COX7B2Q8TF08 81 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 PLEKHB2Q96CS7 222 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 RMI2Q96E14 147 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 ZNF625Q96I27 306 aaPredicted RBP3.4□□□□□ -1.87
SPG11-220ENST00000559933 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
SPG11-220ENST00000559933 HECTD4Q9Y4D8 3996 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 A0A087WTM6 91 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 GVQW2A0A096LPI5 108 aaPredicted RBP3.39□□□□□ -1.87
SPG11-220ENST00000559933 A0A0U1RRA0 63 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 E9PLD3 99 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 H3BRM9 83 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 J3QQQ9 107 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 LEPROTO15243 131 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 SMIM6P0DI80 62 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 HERVK_113P61574 105 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 UNQ6190/PRO20217Q6UXQ8 127 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 Q6ZRU5 148 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 C14orf144Q96I85 54 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 C12orf57Q99622 126 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 VAMP8Q9BV40 100 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 TM2D2Q9BX73 214 aa3.39□□□□□ -1.87
SPG11-220ENST00000559933 K7EP13 123 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 PRSS2P07478 247 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 LGALS3P17931 250 aaKnown RBP3.38□□□□□ -1.87
SPG11-220ENST00000559933 CFAP161Q6P656 301 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 Q8IZM0 81 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 Q8N814 137 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 CAMK2N2Q96S95 79 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 C6orf48Q9UBA6 75 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 NDUFA12Q9UI09 145 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 KIAA1109Q2LD37 5005 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 PKHD1P08F94 4074 aa3.38□□□□□ -1.87
SPG11-220ENST00000559933 ZNF815PA8K554 130 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 HSBP1L1C9JCN9 74 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 NDUFA1O15239 70 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 APOMO95445 188 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 PFN2P35080 140 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 NPC2P61916 151 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 C6orf226Q5I0X4 101 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 LINC00518Q8N0U6 118 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 LINC01561Q8N1V8 128 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 DAND5Q8N907 189 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms