RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 TIMM17AQ99595 171 aa6.68□□□□□ -1.34
HERC1-204ENST00000559715 IGLV4-3A0A075B6K6 122 aa6.67□□□□□ -1.34
HERC1-204ENST00000559715 TRGC2P03986 189 aa6.67□□□□□ -1.34
HERC1-204ENST00000559715 LINC00614P0C842 121 aa6.67□□□□□ -1.34
HERC1-204ENST00000559715 URB1-AS1Q96HZ7 61 aa6.67□□□□□ -1.34
HERC1-204ENST00000559715 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
HERC1-204ENST00000559715 IGHV3OR16-9A0A0B4J2B5 98 aa6.66□□□□□ -1.34
HERC1-204ENST00000559715 PAPPA-AS1Q5QFB9 102 aa6.66□□□□□ -1.34
HERC1-204ENST00000559715 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
HERC1-204ENST00000559715 TMEM141Q96I45 108 aa6.66□□□□□ -1.34
HERC1-204ENST00000559715 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
HERC1-204ENST00000559715 A0A096LNJ9 63 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 TRAV13-1A0A0B4J241 112 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 H0Y9J4 135 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 MALP21145 153 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 Q6ZN92 141 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 ERASQ7Z444 233 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 AMELXQ99217 191 aa6.65□□□□□ -1.34
HERC1-204ENST00000559715 IFITM10A6NMD0 228 aa6.64□□□□□ -1.35
HERC1-204ENST00000559715 HBDP02042 147 aa6.64□□□□□ -1.35
HERC1-204ENST00000559715 RPL18AQ02543 176 aaKnown RBP6.64□□□□□ -1.35
HERC1-204ENST00000559715 SPAG11BQ08648 103 aa6.64□□□□□ -1.35
HERC1-204ENST00000559715 KIAA0087Q14695 138 aa6.64□□□□□ -1.35
HERC1-204ENST00000559715 TEX43Q6ZNM6 134 aa6.64□□□□□ -1.35
HERC1-204ENST00000559715 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
HERC1-204ENST00000559715 DIRC1Q969H9 104 aa6.64□□□□□ -1.35
HERC1-204ENST00000559715 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
HERC1-204ENST00000559715 UNQ6190/PRO20217Q6UXQ8 127 aa6.63□□□□□ -1.35
HERC1-204ENST00000559715 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
HERC1-204ENST00000559715 OR10D4PQ8NGN7 298 aa6.63□□□□□ -1.35
HERC1-204ENST00000559715 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
HERC1-204ENST00000559715 C2orf88Q9BSF0 95 aa6.63□□□□□ -1.35
HERC1-204ENST00000559715 C6orf48Q9UBA6 75 aa6.63□□□□□ -1.35
HERC1-204ENST00000559715 UBE2D1P51668 147 aa6.62□□□□□ -1.35
HERC1-204ENST00000559715 VCX2Q9H322 139 aa6.62□□□□□ -1.35
HERC1-204ENST00000559715 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 A0A087WZ39 114 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 F8WDY8 70 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 ATP5LO75964 103 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 LINC00310P59036 64 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 LINC00242Q5T6M2 205 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 BAGE3Q86Y29 109 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 ORAOV1Q8WV07 137 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
HERC1-204ENST00000559715 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
HERC1-204ENST00000559715 SERF1AO75920 110 aa6.6□□□□□ -1.35
HERC1-204ENST00000559715 SEC11AP67812 179 aa6.6□□□□□ -1.35
HERC1-204ENST00000559715 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BKO60814 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HSBP1O75506 76 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BJP06899 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BOP23527 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BBP33778 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BDP58876 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BCP62807 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 PMCHL1Q16048 86 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST2H2BEQ16778 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.59□□□□□ -1.35
HERC1-204ENST00000559715 C9orf129Q5T035 196 aaKnown RBP6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BHQ93079 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BNQ99877 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 HIST1H2BMQ99879 126 aa6.59□□□□□ -1.35
HERC1-204ENST00000559715 NDUFA1O15239 70 aa6.58□□□□□ -1.36
HERC1-204ENST00000559715 HERVK_113P63121 156 aa6.58□□□□□ -1.36
HERC1-204ENST00000559715 PMVKQ15126 192 aa6.58□□□□□ -1.36
HERC1-204ENST00000559715 ZC2HC1BQ5TFG8 222 aa6.58□□□□□ -1.36
HERC1-204ENST00000559715 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
HERC1-204ENST00000559715 CST9LQ9H4G1 147 aa6.58□□□□□ -1.36
HERC1-204ENST00000559715 IGLV5-45A0A087WSX0 123 aa6.57□□□□□ -1.36
HERC1-204ENST00000559715 GAGE2EQ4V326 116 aa6.57□□□□□ -1.36
HERC1-204ENST00000559715 COA6Q5JTJ3 125 aaKnown RBP6.57□□□□□ -1.36
HERC1-204ENST00000559715 C2orf82Q6UX34 121 aa6.57□□□□□ -1.36
HERC1-204ENST00000559715 GAGE2DQ9UEU5 116 aa6.57□□□□□ -1.36
HERC1-204ENST00000559715 TINCRA0A1B0GVN0 87 aa6.56□□□□□ -1.36
HERC1-204ENST00000559715 IFI27L1Q96BM0 104 aa6.56□□□□□ -1.36
HERC1-204ENST00000559715 PACRGQ96M98 296 aaPredicted RBP6.56□□□□□ -1.36
HERC1-204ENST00000559715 TRAV12-1A0A0B4J245 112 aa6.55□□□□□ -1.36
HERC1-204ENST00000559715 M0QXV9 152 aa6.55□□□□□ -1.36
HERC1-204ENST00000559715 NUPR1O60356 82 aa6.55□□□□□ -1.36
HERC1-204ENST00000559715 IGLC3P0DOY3 106 aa6.55□□□□□ -1.36
HERC1-204ENST00000559715 PRR4Q16378 134 aa6.55□□□□□ -1.36
HERC1-204ENST00000559715 FAM19A2Q8N3H0 131 aa6.55□□□□□ -1.36
HERC1-204ENST00000559715 GEMIN7Q9H840 131 aaKnown RBP6.55□□□□□ -1.36
HERC1-204ENST00000559715 NDUFC2-KCTD14E9PQ53 114 aa6.54□□□□□ -1.36
HERC1-204ENST00000559715 LEPROTL1O95214 131 aa6.54□□□□□ -1.36
HERC1-204ENST00000559715 HSPB8Q9UJY1 196 aa6.54□□□□□ -1.36
HERC1-204ENST00000559715 A0A087X002 238 aa6.53□□□□□ -1.36
HERC1-204ENST00000559715 TRBV30A0A0K0K1B3 111 aa6.53□□□□□ -1.36
HERC1-204ENST00000559715 ZNF861PO60384 105 aa6.53□□□□□ -1.36
HERC1-204ENST00000559715 CDKN2A-AS1Q9UH64 79 aa6.53□□□□□ -1.36
HERC1-204ENST00000559715 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
HERC1-204ENST00000559715 RPL13AP40429 203 aaKnown RBP6.52□□□□□ -1.37
HERC1-204ENST00000559715 LINC00469Q8N7U9 141 aa6.52□□□□□ -1.37
HERC1-204ENST00000559715 F8VRH5 84 aa6.51□□□□□ -1.37
HERC1-204ENST00000559715 H3BRM9 83 aa6.51□□□□□ -1.37
HERC1-204ENST00000559715 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
HERC1-204ENST00000559715 NDUFA6P56556 154 aa6.51□□□□□ -1.37
HERC1-204ENST00000559715 Q8IZM0 81 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms