RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 IGLV10-54A0A075B6I4 117 aa11.05□□□□□ -0.64
TPM1-219ENST00000559397 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
TPM1-219ENST00000559397 COX7A2LO14548 114 aa11.05□□□□□ -0.64
TPM1-219ENST00000559397 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM1-219ENST00000559397 A6NDN8 102 aa11.04□□□□□ -0.64
TPM1-219ENST00000559397 TMEM238C9JI98 176 aa11.04□□□□□ -0.64
TPM1-219ENST00000559397 UBE2WQ96B02 151 aa11.04□□□□□ -0.64
TPM1-219ENST00000559397 HERV-K104P63124 156 aa11.04□□□□□ -0.64
TPM1-219ENST00000559397 MIAQ16674 131 aa11.04□□□□□ -0.64
TPM1-219ENST00000559397 A0A1B0GV90 55 aa11.03□□□□□ -0.64
TPM1-219ENST00000559397 TAX1BP3O14907 124 aa11.03□□□□□ -0.64
TPM1-219ENST00000559397 CRPP02741 224 aa11.03□□□□□ -0.64
TPM1-219ENST00000559397 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.64
TPM1-219ENST00000559397 PTTG1IPP53801 180 aa11.02□□□□□ -0.64
TPM1-219ENST00000559397 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.64
TPM1-219ENST00000559397 SPANXCQ9NY87 97 aa11.02□□□□□ -0.64
TPM1-219ENST00000559397 ADAMTSL4-AS1Q5T5F5 129 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 KRTAP26-1Q6PEX3 210 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 Q6ZVH6 145 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 Q8IZM0 81 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 Q9HAA7 133 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 TOMM7Q9P0U1 55 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 DNAH11Q96DT5 4516 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
TPM1-219ENST00000559397 KIAA0087Q14695 138 aa11□□□□□ -0.65
TPM1-219ENST00000559397 SFTA2Q6UW10 78 aa11□□□□□ -0.65
TPM1-219ENST00000559397 C6orf223Q8N319 242 aa11□□□□□ -0.65
TPM1-219ENST00000559397 TMEM238LA0A1B0GVL6 79 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 A6NJY4 79 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 MALP21145 153 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 CIRBPQ14011 172 aaKnown RBP10.98□□□□□ -0.65
TPM1-219ENST00000559397 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
TPM1-219ENST00000559397 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
TPM1-219ENST00000559397 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 C1orf134Q5TEV5 83 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 MUSTN1Q8IVN3 82 aa10.98□□□□□ -0.65
TPM1-219ENST00000559397 PRSS2P07478 247 aa10.97□□□□□ -0.65
TPM1-219ENST00000559397 C1orf43Q9BWL3 253 aa10.97□□□□□ -0.65
TPM1-219ENST00000559397 IGKV2D-24A0A075B6R9 120 aa10.96□□□□□ -0.65
TPM1-219ENST00000559397 APOMO95445 188 aa10.96□□□□□ -0.65
TPM1-219ENST00000559397 IFITM1P13164 125 aa10.96□□□□□ -0.65
TPM1-219ENST00000559397 K7ERJ3 54 aa10.95□□□□□ -0.66
TPM1-219ENST00000559397 RMI2Q96E14 147 aa10.95□□□□□ -0.66
TPM1-219ENST00000559397 CXCL5P42830 114 aa10.95□□□□□ -0.66
TPM1-219ENST00000559397 RPL24P83731 157 aaKnown RBP10.95□□□□□ -0.66
TPM1-219ENST00000559397 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
TPM1-219ENST00000559397 HECTD4Q9Y4D8 3996 aa10.95□□□□□ -0.66
TPM1-219ENST00000559397 A4D1N5 150 aa10.94□□□□□ -0.66
TPM1-219ENST00000559397 C9orf118A6NHY6 69 aa10.94□□□□□ -0.66
TPM1-219ENST00000559397 RTL8CO15255 209 aa10.94□□□□□ -0.66
TPM1-219ENST00000559397 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
TPM1-219ENST00000559397 PKD1P98161 4303 aa10.93□□□□□ -0.66
TPM1-219ENST00000559397 CFC1BP0CG36 223 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 CFC1P0CG37 223 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 SPAG11BQ08648 103 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 CFAP161Q6P656 301 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 C2orf82Q6UX34 121 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 DAND5Q8N907 189 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
TPM1-219ENST00000559397 CKS1BP61024 79 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
TPM1-219ENST00000559397 A0A0U1RRA0 63 aa10.91□□□□□ -0.66
TPM1-219ENST00000559397 DNAH5Q8TE73 4624 aa10.9□□□□□ -0.66
TPM1-219ENST00000559397 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.9□□□□□ -0.66
TPM1-219ENST00000559397 SOSTDC1Q6X4U4 206 aa10.9□□□□□ -0.66
TPM1-219ENST00000559397 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
TPM1-219ENST00000559397 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
TPM1-219ENST00000559397 PSCAO43653 123 aa10.89□□□□□ -0.67
TPM1-219ENST00000559397 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
TPM1-219ENST00000559397 NPC2P61916 151 aa10.89□□□□□ -0.67
TPM1-219ENST00000559397 MIR7-3HGQ8N6C7 128 aa10.89□□□□□ -0.67
TPM1-219ENST00000559397 H3BUT2 72 aa10.88□□□□□ -0.67
TPM1-219ENST00000559397 LINC00158P58513 81 aa10.88□□□□□ -0.67
TPM1-219ENST00000559397 C15orf56Q8N910 161 aa10.88□□□□□ -0.67
TPM1-219ENST00000559397 NTN5Q8WTR8 489 aaPredicted RBP10.88□□□□□ -0.67
TPM1-219ENST00000559397 LRCOL1A6NCL2 159 aa10.87□□□□□ -0.67
TPM1-219ENST00000559397 COX17Q14061 63 aa10.86□□□□□ -0.67
TPM1-219ENST00000559397 PRO1854Q9UHT4 67 aa10.86□□□□□ -0.67
TPM1-219ENST00000559397 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
TPM1-219ENST00000559397 PFN2P35080 140 aa10.85□□□□□ -0.67
TPM1-219ENST00000559397 TNP2Q05952 138 aa10.85□□□□□ -0.67
TPM1-219ENST00000559397 WFDC2Q14508 124 aa10.85□□□□□ -0.67
TPM1-219ENST00000559397 C10orf25Q5T742 122 aa10.85□□□□□ -0.67
TPM1-219ENST00000559397 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
TPM1-219ENST00000559397 LINC00526Q96FQ7 95 aa10.85□□□□□ -0.67
TPM1-219ENST00000559397 NAA38Q9BRA0 125 aaKnown RBP10.85□□□□□ -0.67
TPM1-219ENST00000559397 A0A1W2PPM0 123 aa10.85□□□□□ -0.67
TPM1-219ENST00000559397 PGPEP1Q9NXJ5 209 aa10.84□□□□□ -0.67
TPM1-219ENST00000559397 A0A087WTM6 91 aa10.83□□□□□ -0.68
TPM1-219ENST00000559397 LECT2O14960 151 aa10.83□□□□□ -0.68
TPM1-219ENST00000559397 TSPAN13O95857 204 aa10.83□□□□□ -0.68
TPM1-219ENST00000559397 VAMP3Q15836 100 aa10.83□□□□□ -0.68
TPM1-219ENST00000559397 C2orf48Q96LS8 159 aa10.83□□□□□ -0.68
TPM1-219ENST00000559397 LOC107984156A0A0G2JMH3 177 aa10.82□□□□□ -0.68
TPM1-219ENST00000559397 USP17L23D6RBM5 183 aa10.82□□□□□ -0.68
TPM1-219ENST00000559397 F8WDY8 70 aa10.82□□□□□ -0.68
TPM1-219ENST00000559397 ZNF561-AS1K7EIQ3 104 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms