RNA–Protein interactions for RNA: ENST00000559268.5

MARK3-217, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-217ENST00000559268 LINC00959A0A1B0GUT2 108 aa-0.21□□□□□ -2.44
MARK3-217ENST00000559268 A0A1B0GWA3 101 aa-0.21□□□□□ -2.44
MARK3-217ENST00000559268 hADV29S1A0JD25 119 aa-0.21□□□□□ -2.44
MARK3-217ENST00000559268 SPRR1BP22528 89 aa-0.21□□□□□ -2.44
MARK3-217ENST00000559268 KRTDAPP60985 99 aa-0.21□□□□□ -2.44
MARK3-217ENST00000559268 ABCC5O15440 1437 aa-0.21□□□□□ -2.44
MARK3-217ENST00000559268 CREBBPQ92793 2442 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 GAPVD1Q14C86 1478 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 TNXBP22105 4242 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 ZFYVE16Q7Z3T8 1539 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 SAA2P0DJI9 122 aaPredicted RBP-0.22□□□□□ -2.44
MARK3-217ENST00000559268 S100PP25815 95 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 FDCSPQ8NFU4 85 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 LCN9Q8WX39 176 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 COL4A6Q14031 1691 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 COL6A3P12111 3177 aa-0.22□□□□□ -2.44
MARK3-217ENST00000559268 MAP1AP78559 2803 aaPredicted RBP-0.22□□□□□ -2.44
MARK3-217ENST00000559268 HECTD4Q9Y4D8 3996 aa-0.22□□□□□ -2.45
MARK3-217ENST00000559268 C1orf167Q5SNV9 1468 aa-0.22□□□□□ -2.45
MARK3-217ENST00000559268 PRO1933Q9H354 126 aa-0.23□□□□□ -2.45
MARK3-217ENST00000559268 LINC00846Q9NV44 126 aa-0.23□□□□□ -2.45
MARK3-217ENST00000559268 ALMS1Q8TCU4 4167 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 CHD1O14646 1710 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 SYS1-DBNDD2H3BUS1 97 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 SPINK4O60575 86 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 SEC11AP67812 179 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 CGREF1Q99674 301 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 TOPAZ1Q8N9V7 1692 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
MARK3-217ENST00000559268 BSNQ9UPA5 3926 aa-0.25□□□□□ -2.45
MARK3-217ENST00000559268 PDZD2O15018 2839 aa-0.25□□□□□ -2.45
MARK3-217ENST00000559268 C14orf144Q96I85 54 aa-0.25□□□□□ -2.45
MARK3-217ENST00000559268 PEG3Q9GZU2 1588 aa-0.25□□□□□ -2.45
MARK3-217ENST00000559268 SETD2Q9BYW2 2564 aaPredicted RBP-0.26□□□□□ -2.45
MARK3-217ENST00000559268 KRTAP19-7Q3SYF9 63 aa-0.26□□□□□ -2.45
MARK3-217ENST00000559268 NF1P21359 2839 aa-0.26□□□□□ -2.45
MARK3-217ENST00000559268 NUP188Q5SRE5 1749 aa-0.27□□□□□ -2.45
MARK3-217ENST00000559268 ABCA3Q99758 1704 aa-0.27□□□□□ -2.45
MARK3-217ENST00000559268 KLK9Q2XQG4 91 aa-0.27□□□□□ -2.45
MARK3-217ENST00000559268 DEFB105AQ8NG35 78 aa-0.27□□□□□ -2.45
MARK3-217ENST00000559268 M0R2T5 61 aa-0.28□□□□□ -2.45
MARK3-217ENST00000559268 COX8AP10176 69 aa-0.28□□□□□ -2.45
MARK3-217ENST00000559268 TGP01266 2768 aa-0.29□□□□□ -2.46
MARK3-217ENST00000559268 TMEM218A2RU14 115 aa-0.29□□□□□ -2.46
MARK3-217ENST00000559268 SPRR2BP35325 72 aa-0.29□□□□□ -2.46
MARK3-217ENST00000559268 APLNQ9ULZ1 77 aa-0.29□□□□□ -2.46
MARK3-217ENST00000559268 PCNX1Q96RV3 2341 aa-0.29□□□□□ -2.46
MARK3-217ENST00000559268 SETBP1Q9Y6X0 1596 aa-0.29□□□□□ -2.46
MARK3-217ENST00000559268 USMG5Q96IX5 58 aa-0.3□□□□□ -2.46
MARK3-217ENST00000559268 TCEAL7Q9BRU2 100 aa-0.3□□□□□ -2.46
MARK3-217ENST00000559268 PLEKHH2Q8IVE3 1493 aa-0.3□□□□□ -2.46
MARK3-217ENST00000559268 XRN1Q8IZH2 1706 aaKnown RBP-0.3□□□□□ -2.46
MARK3-217ENST00000559268 TRAV30A0A087WSZ9 112 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 A0A087WVE0 104 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 CPSF4LA6NMK7 179 aaKnown RBP-0.31□□□□□ -2.46
MARK3-217ENST00000559268 GNGT2O14610 69 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 CACFD1Q9UGQ2 172 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 A0A0G2JMZ2 1700 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 NLRP1Q9C000 1473 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 EPG5Q9HCE0 2579 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 KNL1Q8NG31 2342 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 PDCD11Q14690 1871 aaKnown RBP-0.31□□□□□ -2.46
MARK3-217ENST00000559268 KIAA0556O60303 1618 aa-0.31□□□□□ -2.46
MARK3-217ENST00000559268 SPG11Q96JI7 2443 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 NBASA2RRP1 2371 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 PRDM15P57071 1507 aaPredicted RBP-0.32□□□□□ -2.46
MARK3-217ENST00000559268 IQSEC2Q5JU85 1478 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 A0A0G2JND7 137 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 C7orf77A4D0Y5 90 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 NDUFC1O43677 76 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
MARK3-217ENST00000559268 HERC1Q15751 4861 aa-0.32□□□□□ -2.46
MARK3-217ENST00000559268 LRP1BQ9NZR2 4599 aa-0.33□□□□□ -2.46
MARK3-217ENST00000559268 ATP6V1G2-DDX39BF2Z307 99 aa-0.33□□□□□ -2.46
MARK3-217ENST00000559268 MT-ATP8P03928 68 aa-0.33□□□□□ -2.46
MARK3-217ENST00000559268 DEFB135Q30KP9 77 aa-0.33□□□□□ -2.46
MARK3-217ENST00000559268 TRBV25-1A0A075B6N4 114 aa-0.34□□□□□ -2.46
MARK3-217ENST00000559268 FMN2Q9NZ56 1722 aa-0.34□□□□□ -2.46
MARK3-217ENST00000559268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.35□□□□□ -2.461e-13■■■■■ 50.7
MARK3-217ENST00000559268 MLH3Q9UHC1 1453 aa-0.35□□□□□ -2.46
MARK3-217ENST00000559268 A0A1B0GU69 56 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 H7BZZ5 65 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 I3L3M4 83 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 ASIPP42127 132 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 RBP2P50120 134 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 S100A10P60903 97 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 VAMP8Q9BV40 100 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 CRIPTQ9P021 101 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 CCDC141Q6ZP82 1450 aa-0.35□□□□□ -2.47
MARK3-217ENST00000559268 SPTBN4Q9H254 2564 aa-0.36□□□□□ -2.47
MARK3-217ENST00000559268 HEPN1Q6WQI6 88 aa-0.36□□□□□ -2.47
MARK3-217ENST00000559268 TRGV9Q99603 122 aa-0.36□□□□□ -2.47
MARK3-217ENST00000559268 GNGT1P63211 74 aa-0.37□□□□□ -2.47
MARK3-217ENST00000559268 PMCHL1Q16048 86 aa-0.37□□□□□ -2.47
MARK3-217ENST00000559268 PMCHL2Q9BQD1 86 aa-0.37□□□□□ -2.47
MARK3-217ENST00000559268 PDE4DIPQ5VU43 2346 aa-0.37□□□□□ -2.47
MARK3-217ENST00000559268 FAT1Q14517 4588 aa-0.38□□□□□ -2.47
MARK3-217ENST00000559268 H3BQF6 201 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms