RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 IGHV3-33P01772 117 aa7.56□□□□□ -1.2
CSPG4P5-201ENST00000558731 FAM104AQ969W3 186 aa7.56□□□□□ -1.2
CSPG4P5-201ENST00000558731 IGHV1-58A0A0C4DH39 117 aa7.56□□□□□ -1.2
CSPG4P5-201ENST00000558731 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
CSPG4P5-201ENST00000558731 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.55□□□□□ -1.2
CSPG4P5-201ENST00000558731 LINC00269Q8N2A0 174 aa7.55□□□□□ -1.2
CSPG4P5-201ENST00000558731 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
CSPG4P5-201ENST00000558731 MRPL23Q16540 153 aaKnown RBP7.54□□□□□ -1.2
CSPG4P5-201ENST00000558731 ICOSQ9Y6W8 199 aa7.54□□□□□ -1.2
CSPG4P5-201ENST00000558731 SBSPONQ8IVN8 264 aa7.54□□□□□ -1.2
CSPG4P5-201ENST00000558731 MDFIQ99750 246 aa7.54□□□□□ -1.2
CSPG4P5-201ENST00000558731 CLEC2BQ92478 149 aa7.53□□□□□ -1.2
CSPG4P5-201ENST00000558731 KLK12Q9UKR0 248 aa7.53□□□□□ -1.2
CSPG4P5-201ENST00000558731 A0A0J9YXY3 114 aa7.53□□□□□ -1.2
CSPG4P5-201ENST00000558731 PFN2P35080 140 aa7.53□□□□□ -1.2
CSPG4P5-201ENST00000558731 C11orf45Q8TAV5 145 aa7.53□□□□□ -1.2
CSPG4P5-201ENST00000558731 MALP21145 153 aa7.52□□□□□ -1.21
CSPG4P5-201ENST00000558731 SS18Q15532 418 aa7.52□□□□□ -1.21
CSPG4P5-201ENST00000558731 CIRBPQ14011 172 aaKnown RBP7.52□□□□□ -1.21
CSPG4P5-201ENST00000558731 C6orf226Q5I0X4 101 aa7.52□□□□□ -1.21
CSPG4P5-201ENST00000558731 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
CSPG4P5-201ENST00000558731 TRBV10-2A0A0K0K1G8 114 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 FAM236AA0A1B0GUQ0 79 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 FAM236BA0A1B0GV22 79 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 TRIAP1O43715 76 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 KPRPQ5T749 579 aaPredicted RBP7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 LINC00158P58513 81 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
CSPG4P5-201ENST00000558731 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
CSPG4P5-201ENST00000558731 CRPP02741 224 aa7.5□□□□□ -1.21
CSPG4P5-201ENST00000558731 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
CSPG4P5-201ENST00000558731 TIRAPP58753 221 aa7.49□□□□□ -1.21
CSPG4P5-201ENST00000558731 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
CSPG4P5-201ENST00000558731 LINC00612Q8N6U2 182 aa7.49□□□□□ -1.21
CSPG4P5-201ENST00000558731 REG3AQ06141 175 aa7.49□□□□□ -1.21
CSPG4P5-201ENST00000558731 Q9HAA7 133 aa7.48□□□□□ -1.21
CSPG4P5-201ENST00000558731 CSDC2Q9Y534 153 aaKnown RBP7.48□□□□□ -1.21
CSPG4P5-201ENST00000558731 A0A0B4J2C4 111 aa7.47□□□□□ -1.21
CSPG4P5-201ENST00000558731 WIPF1O43516 503 aa7.47□□□□□ -1.21
CSPG4P5-201ENST00000558731 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
CSPG4P5-201ENST00000558731 EGFEM1PQ0D2K5 195 aa7.47□□□□□ -1.21
CSPG4P5-201ENST00000558731 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
CSPG4P5-201ENST00000558731 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
CSPG4P5-201ENST00000558731 H7C423 109 aa7.46□□□□□ -1.21
CSPG4P5-201ENST00000558731 K7EIL1 84 aa7.46□□□□□ -1.21
CSPG4P5-201ENST00000558731 PPDPFQ9H3Y8 114 aa7.46□□□□□ -1.21
CSPG4P5-201ENST00000558731 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
CSPG4P5-201ENST00000558731 COX7A2LO14548 114 aa7.44□□□□□ -1.22
CSPG4P5-201ENST00000558731 Q6Q795 121 aa7.44□□□□□ -1.22
CSPG4P5-201ENST00000558731 LYPD5Q6UWN5 251 aa7.44□□□□□ -1.22
CSPG4P5-201ENST00000558731 MIR7-3HGQ8N6C7 128 aa7.44□□□□□ -1.22
CSPG4P5-201ENST00000558731 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
CSPG4P5-201ENST00000558731 TRBV30A0A0K0K1B3 111 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 H3BT86 120 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 M0QXV9 152 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 NDUFA1O15239 70 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 LELP1Q5T871 98 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 GAGE2AQ6NT46 116 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 MIAQ16674 131 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
CSPG4P5-201ENST00000558731 IGHV3OR16-9A0A0B4J2B5 98 aa7.42□□□□□ -1.22
CSPG4P5-201ENST00000558731 IGKV2D-24A0A075B6R9 120 aa7.42□□□□□ -1.22
CSPG4P5-201ENST00000558731 KLK5Q9Y337 293 aaPredicted RBP7.42□□□□□ -1.22
CSPG4P5-201ENST00000558731 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
CSPG4P5-201ENST00000558731 IGLV5-45A0A087WSX0 123 aa7.41□□□□□ -1.22
CSPG4P5-201ENST00000558731 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
CSPG4P5-201ENST00000558731 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
CSPG4P5-201ENST00000558731 ESRGQ1W209 222 aa7.41□□□□□ -1.22
CSPG4P5-201ENST00000558731 IGLV5-39A0A0G2JS06 123 aa7.4□□□□□ -1.22
CSPG4P5-201ENST00000558731 A0A087WZ39 114 aa7.4□□□□□ -1.22
CSPG4P5-201ENST00000558731 A0A1B0GUV1 79 aa7.4□□□□□ -1.22
CSPG4P5-201ENST00000558731 LINC00308Q8TCZ7 52 aa7.4□□□□□ -1.22
CSPG4P5-201ENST00000558731 C6orf223Q8N319 242 aa7.39□□□□□ -1.23
CSPG4P5-201ENST00000558731 SPAG11BQ08648 103 aa7.39□□□□□ -1.23
CSPG4P5-201ENST00000558731 CD164L2Q6UWJ8 174 aa7.39□□□□□ -1.23
CSPG4P5-201ENST00000558731 LITAFQ99732 161 aa7.39□□□□□ -1.23
CSPG4P5-201ENST00000558731 LST1O00453 97 aa7.38□□□□□ -1.23
CSPG4P5-201ENST00000558731 BAALC-AS2P0C853 105 aa7.38□□□□□ -1.23
CSPG4P5-201ENST00000558731 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
CSPG4P5-201ENST00000558731 DNAL4O96015 105 aa7.37□□□□□ -1.23
CSPG4P5-201ENST00000558731 TRAV10A0A0B4J240 114 aa7.37□□□□□ -1.23
CSPG4P5-201ENST00000558731 C3orf22Q8N5N4 141 aa7.37□□□□□ -1.23
CSPG4P5-201ENST00000558731 C1orf43Q9BWL3 253 aa7.37□□□□□ -1.23
CSPG4P5-201ENST00000558731 SOSTDC1Q6X4U4 206 aa7.37□□□□□ -1.23
CSPG4P5-201ENST00000558731 UBE2DNLQ8IWF7 75 aa7.37□□□□□ -1.23
CSPG4P5-201ENST00000558731 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 LECT2O14960 151 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 IGKV3D-7A0A0C4DH55 119 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 CCL18P55774 89 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 UNQ6190/PRO20217Q6UXQ8 127 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 LINC00643Q86TS7 51 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
CSPG4P5-201ENST00000558731 hADV29S1A0JD25 119 aa7.35□□□□□ -1.23
CSPG4P5-201ENST00000558731 UQCRQO14949 82 aa7.35□□□□□ -1.23
CSPG4P5-201ENST00000558731 ACYP1P07311 99 aa7.35□□□□□ -1.23
CSPG4P5-201ENST00000558731 ENHOQ6UWT2 76 aa7.35□□□□□ -1.23
CSPG4P5-201ENST00000558731 J3KT08 172 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms