RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PRRC2AP48634 2157 aaKnown RBP10.05□□□□□ -0.8
SPG11-210ENST00000558319 TET2Q6N021 2002 aaPredicted RBP10.03□□□□□ -0.8
SPG11-210ENST00000558319 ATG2AQ2TAZ0 1938 aa10.03□□□□□ -0.8
SPG11-210ENST00000558319 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
SPG11-210ENST00000558319 REG3GQ6UW15 175 aa10.02□□□□□ -0.81
SPG11-210ENST00000558319 CDIP1Q9H305 208 aa10.02□□□□□ -0.81
SPG11-210ENST00000558319 BDP1A6H8Y1 2624 aa10.02□□□□□ -0.81
SPG11-210ENST00000558319 PRO0628Q9UI54 55 aa10.02□□□□□ -0.81
SPG11-210ENST00000558319 CSPG4Q6UVK1 2322 aa10.01□□□□□ -0.81
SPG11-210ENST00000558319 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
SPG11-210ENST00000558319 HIVEP3Q5T1R4 2406 aa10□□□□□ -0.81
SPG11-210ENST00000558319 A0A087WSZ3 146 aa10□□□□□ -0.81
SPG11-210ENST00000558319 Q8N6K4 173 aa10□□□□□ -0.81
SPG11-210ENST00000558319 HCG22E2RYF7 251 aa9.99□□□□□ -0.81
SPG11-210ENST00000558319 MUC4Q99102 2169 aa9.99□□□□□ -0.81
SPG11-210ENST00000558319 SPG11Q96JI7 2443 aa9.99□□□□□ -0.81
SPG11-210ENST00000558319 Q9BRP9 147 aa9.99□□□□□ -0.81
SPG11-210ENST00000558319 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
SPG11-210ENST00000558319 COL5A1P20908 1838 aaPredicted RBP9.98□□□□□ -0.81
SPG11-210ENST00000558319 SONP18583 2426 aaKnown RBP9.97□□□□□ -0.81
SPG11-210ENST00000558319 SMIM29Q86T20 159 aa9.97□□□□□ -0.81
SPG11-210ENST00000558319 CNFNQ9BYD5 112 aa9.97□□□□□ -0.81
SPG11-210ENST00000558319 FSTL3O95633 263 aa9.96□□□□□ -0.81
SPG11-210ENST00000558319 PRLHP81277 87 aa9.96□□□□□ -0.81
SPG11-210ENST00000558319 SPAG11AQ6PDA7 123 aa9.96□□□□□ -0.82
SPG11-210ENST00000558319 Q6ZSN1 163 aa9.96□□□□□ -0.82
SPG11-210ENST00000558319 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
SPG11-210ENST00000558319 A0A096LNJ9 63 aa9.95□□□□□ -0.82
SPG11-210ENST00000558319 ODF3L2Q3SX64 289 aa9.94□□□□□ -0.82
SPG11-210ENST00000558319 IGLV1-40P01703 118 aa9.93□□□□□ -0.82
SPG11-210ENST00000558319 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
SPG11-210ENST00000558319 AGRNO00468 2067 aa9.92□□□□□ -0.82
SPG11-210ENST00000558319 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
SPG11-210ENST00000558319 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
SPG11-210ENST00000558319 LTBP2Q14767 1821 aa9.91□□□□□ -0.82
SPG11-210ENST00000558319 A0A1B0GU69 56 aa9.91□□□□□ -0.82
SPG11-210ENST00000558319 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
SPG11-210ENST00000558319 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
SPG11-210ENST00000558319 GOLGB1Q14789 3259 aaKnown RBP9.9□□□□□ -0.82
SPG11-210ENST00000558319 hDV103S1A0JD37 113 aa9.9□□□□□ -0.82
SPG11-210ENST00000558319 C7orf65Q6ZTY9 151 aa9.9□□□□□ -0.83
SPG11-210ENST00000558319 LIMD2Q9BT23 127 aa9.9□□□□□ -0.83
SPG11-210ENST00000558319 IGKV2D-30A0A075B6S6 120 aa9.89□□□□□ -0.83
SPG11-210ENST00000558319 IGKV2-30P06310 120 aa9.89□□□□□ -0.83
SPG11-210ENST00000558319 AMELXQ99217 191 aa9.89□□□□□ -0.83
SPG11-210ENST00000558319 NOTCH2Q04721 2471 aa9.89□□□□□ -0.83
SPG11-210ENST00000558319 LINC00337Q8N6G1 96 aa9.88□□□□□ -0.83
SPG11-210ENST00000558319 IGLV8-61A0A075B6I0 122 aa9.88□□□□□ -0.83
SPG11-210ENST00000558319 FHL2Q14192 279 aa9.88□□□□□ -0.83
SPG11-210ENST00000558319 NAV3Q8IVL0 2385 aa9.88□□□□□ -0.83
SPG11-210ENST00000558319 CHTF8P0CG12 524 aa9.87□□□□□ -0.83
SPG11-210ENST00000558319 A0A1W2PPR1 153 aa9.87□□□□□ -0.83
SPG11-210ENST00000558319 SPACA4Q8TDM5 124 aa9.86□□□□□ -0.83
SPG11-210ENST00000558319 SPINT4Q6UDR6 99 aa9.86□□□□□ -0.83
SPG11-210ENST00000558319 FSHBP01225 129 aa9.86□□□□□ -0.83
SPG11-210ENST00000558319 CXCL6P80162 114 aa9.86□□□□□ -0.83
SPG11-210ENST00000558319 C2orf48Q96LS8 159 aa9.86□□□□□ -0.83
SPG11-210ENST00000558319 SMCPP49901 116 aaPredicted RBP9.85□□□□□ -0.83
SPG11-210ENST00000558319 ADAMTS20P59510 1910 aa9.85□□□□□ -0.83
SPG11-210ENST00000558319 KIAA0087Q14695 138 aa9.83□□□□□ -0.84
SPG11-210ENST00000558319 Q6ZRU5 148 aa9.83□□□□□ -0.84
SPG11-210ENST00000558319 SPATA3Q8NHX4 192 aa9.83□□□□□ -0.84
SPG11-210ENST00000558319 VPREB1P12018 145 aa9.82□□□□□ -0.84
SPG11-210ENST00000558319 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
SPG11-210ENST00000558319 PTPRSQ13332 1948 aa9.81□□□□□ -0.84
SPG11-210ENST00000558319 Q8N2B8 174 aa9.8□□□□□ -0.84
SPG11-210ENST00000558319 IGLV1-51P01701 117 aa9.8□□□□□ -0.84
SPG11-210ENST00000558319 ATP11AUNQ6ZP68 121 aa9.79□□□□□ -0.84
SPG11-210ENST00000558319 LRP4O75096 1905 aa9.79□□□□□ -0.84
SPG11-210ENST00000558319 FAM218AQ96MZ4 157 aa9.78□□□□□ -0.84
SPG11-210ENST00000558319 MDFIQ99750 246 aa9.78□□□□□ -0.84
SPG11-210ENST00000558319 SMCR5Q8TEV8 140 aa9.78□□□□□ -0.84
SPG11-210ENST00000558319 CPAMD8Q8IZJ3 1885 aa9.77□□□□□ -0.85
SPG11-210ENST00000558319 PRO3102Q9H379 93 aa9.76□□□□□ -0.85
SPG11-210ENST00000558319 ACYP2P14621 99 aa9.76□□□□□ -0.85
SPG11-210ENST00000558319 TM2D3Q9BRN9 247 aa9.76□□□□□ -0.85
SPG11-210ENST00000558319 ABCA2Q9BZC7 2435 aa9.75□□□□□ -0.85
SPG11-210ENST00000558319 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
SPG11-210ENST00000558319 MOBPQ13875 183 aa9.75□□□□□ -0.85
SPG11-210ENST00000558319 C6orf48Q9UBA6 75 aa9.75□□□□□ -0.85
SPG11-210ENST00000558319 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
SPG11-210ENST00000558319 RPS28P62857 69 aaKnown RBP9.74□□□□□ -0.85
SPG11-210ENST00000558319 PIEZO2Q9H5I5 2752 aa9.73□□□□□ -0.85
SPG11-210ENST00000558319 RPL37AP61513 92 aaKnown RBP9.72□□□□□ -0.85
SPG11-210ENST00000558319 FHL3Q13643 280 aa9.72□□□□□ -0.85
SPG11-210ENST00000558319 PRO0461Q9UI25 63 aa9.72□□□□□ -0.85
SPG11-210ENST00000558319 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
SPG11-210ENST00000558319 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.85
SPG11-210ENST00000558319 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
SPG11-210ENST00000558319 A0A1B0GUV1 79 aa9.69□□□□□ -0.86
SPG11-210ENST00000558319 COX8CQ7Z4L0 72 aa9.68□□□□□ -0.86
SPG11-210ENST00000558319 ANKHD1Q8IWZ3 2542 aaKnown RBP9.67□□□□□ -0.86
SPG11-210ENST00000558319 A8MUN3 132 aa9.67□□□□□ -0.86
SPG11-210ENST00000558319 Q6ZQT0 140 aa9.67□□□□□ -0.86
SPG11-210ENST00000558319 EP400Q96L91 3159 aa9.66□□□□□ -0.86
SPG11-210ENST00000558319 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
SPG11-210ENST00000558319 ACACBO00763 2458 aa9.65□□□□□ -0.86
SPG11-210ENST00000558319 C2CD3Q4AC94 2353 aa9.65□□□□□ -0.86
SPG11-210ENST00000558319 IGLV5-39A0A0G2JS06 123 aa9.64□□□□□ -0.87
SPG11-210ENST00000558319 C16orf95Q9H693 158 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms