RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 IGKV3D-11A0A0A0MRZ8 115 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 HIGD1CA8MV81 97 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 I3L3M4 83 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 IGLV3-19P01714 112 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 IGHV1-69P01742 117 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 FCER1GP30273 86 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 MIR22HGQ0VDD5 57 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 KRTAP25-1Q3LHN0 102 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 CNFNQ9BYD5 112 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 CHD7Q9P2D1 2997 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 NCOR1O75376 2440 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 CACNA1BQ00975 2339 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 MYO7BQ6PIF6 2116 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 HEATR1Q9H583 2144 aaKnown RBP0.87□□□□□ -2.27
HIF1A-212ENST00000557538 TRAV23DV6A0A075B6W5 121 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 IGKV3D-7A0A0C4DH55 119 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 SPINT3P49223 89 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 SPINK7P58062 85 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 TEP1Q99973 2627 aaKnown RBP0.87□□□□□ -2.27
HIF1A-212ENST00000557538 LINC00472Q9H8W2 130 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 CRCT1Q9UGL9 99 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 PLXNB1O43157 2135 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 ARID1AO14497 2285 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 IGLV10-54A0A075B6I4 117 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 A0A087WTM6 91 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 F8VRH5 84 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 MSMBP08118 114 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 FXYD3Q14802 87 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 SPATA8Q6RVD6 105 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 SPINT4Q6UDR6 99 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 DEFB132Q7Z7B7 95 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 Q8TAT8 98 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 CEP350Q5VT06 3117 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 MYCBP2O75592 4640 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 LAMA5O15230 3695 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 CHKB-CPT1BH3BT56 60 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 M0R135 149 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 IGHV1-46P01743 117 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 PDE6GP18545 87 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 EDDM3BP56851 147 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 FAM27BQ5VT28 67 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 SFTA2Q6UW10 78 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 ATRXP46100 2492 aa0.87□□□□□ -2.27
HIF1A-212ENST00000557538 MYO9BQ13459 2157 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 MALRD1Q5VYJ5 2156 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 SRCAPQ6ZRS2 3230 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 TRRAPQ9Y4A5 3859 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 NOTCH2Q04721 2471 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 JMJD1CQ15652 2540 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 IGKV3-7A0A075B6H7 116 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 TRAV12-3A0A0B4J271 114 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 SPINK4O60575 86 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 ARL14EPLP0DKL9 152 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 C1orf137Q5JT78 98 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 SPTSSBQ8NFR3 76 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 TMEM14CQ9P0S9 112 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 ZNF407Q9C0G0 2248 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 HEATR5BQ9P2D3 2071 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 IGKV1D-42A0A075B6H8 117 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 LOC110117498A0A087WWA1 95 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 NREPQ16612 68 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 ENHOQ6UWT2 76 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 CASC2Q6XLA1 102 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 LENEPQ9Y5L5 61 aa0.86□□□□□ -2.27
HIF1A-212ENST00000557538 PRRC2AP48634 2157 aaKnown RBP0.86□□□□□ -2.27
HIF1A-212ENST00000557538 A0A1B0GU33 70 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 ZNF815PA8K554 130 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 IGLV3-1P01715 115 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 CRPP02741 224 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 DEFA4P12838 97 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 ZNF137PP52743 207 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 TFF3Q07654 80 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 DEFB113Q30KQ7 82 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 MUSTN1Q8IVN3 82 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 WFDC9Q8NEX5 89 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 ANK2Q01484 3957 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 USP9XQ93008 2570 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-212ENST00000557538 MUC4Q99102 2169 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 LYSTQ99698 3801 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 C14orf132Q9NPU4 83 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 IGKV3OR2-268A0A0C4DH90 116 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 D6R8Y8 96 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 DEFB114Q30KQ6 69 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 HIGD2AQ9BW72 106 aa0.85□□□□□ -2.27
HIF1A-212ENST00000557538 FRAS1Q86XX4 4008 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 CSMD3Q7Z407 3707 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 TRAV21A0A0B4J279 112 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 IGKV4-1P06312 121 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 CCL18P55774 89 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 RPL38P63173 70 aaKnown RBP0.84□□□□□ -2.27
HIF1A-212ENST00000557538 PDE6HQ13956 83 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 PI4KAP42356 2102 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 ZNF318Q5VUA4 2279 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 MED12Q93074 2177 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 PIGBOS1A0A0B4J2F0 54 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 IGHV1-18A0A0C4DH31 117 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 M0R1W7 72 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 IGHV3-53P01767 116 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 IGLV7-43P04211 117 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms