RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SPTBN5Q9NRC6 3674 aaKnown RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 LOC105371267A0A1B0GV96 52 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 CHKB-CPT1BH3BT56 60 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 SCGB1A1P11684 91 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 GUCA1AP43080 201 aaPredicted RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 DR1Q01658 176 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 SMIM21Q3B7S5 101 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 MRPL54Q6P161 138 aaKnown RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 SFTA2Q6UW10 78 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 FAM223AQ8IWN6 122 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 MGST2Q99735 147 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 PDCD10Q9BUL8 212 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 SPANXDQ9BXN6 97 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 NAA60Q9H7X0 242 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 DYNLRB1Q9NP97 96 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 CDC42SE2Q9NRR3 84 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 XRN1Q8IZH2 1706 aaKnown RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 C5orf42Q9H799 3197 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 CPSF1Q10570 1443 aaKnown RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 TROQ12816 1431 aaPredicted RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 ADGRL2O95490 1459 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 CFTRP13569 1480 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 NKTRP30414 1462 aaKnown RBP-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 GRIN2AQ12879 1464 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 NLRP1Q9C000 1473 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 MBD5Q9P267 1494 aa-0.48□□□□□ -2.49
FOXN3-216ENST00000557496 COL6A5A8TX70 2615 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 SPENQ96T58 3664 aaKnown RBP-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 SRCAPQ6ZRS2 3230 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 KNDC1Q76NI1 1749 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 RGPD2P0DJD1 1756 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 TRIOO75962 3097 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 OOSP1A8MZH6 123 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 SYS1-DBNDD2H3BUS1 97 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 J3QR89 54 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 APOC3P02656 99 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 TPPP2P59282 170 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 SMCO1Q147U7 214 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 C9orf62Q8N4C0 152 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 FDCSPQ8NFU4 85 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 ANP32BQ92688 251 aaKnown RBP-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 TMEM191AQ9H0A3 160 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 NXT2Q9NPJ8 142 aaKnown RBP-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 SERP1Q9Y6X1 66 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 ARL2-SNX15V9GYD0 113 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 PLEKHH2Q8IVE3 1493 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 SHANK2Q9UPX8 1470 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 ACACBO00763 2458 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 CEP290O15078 2479 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 CELSR3Q9NYQ7 3312 aa-0.49□□□□□ -2.49
FOXN3-216ENST00000557496 A0A0G2JMZ2 1700 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 COL12A1Q99715 3063 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 FAM223BA6NKX1 122 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 K7EP13 123 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 GNG7O60262 68 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 MGPP08493 103 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 UBA52P62987 128 aaKnown RBP-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 HSD52Q0P140 79 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 MEIG1Q5JSS6 88 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 AKAP14Q86UN6 197 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 MAFIPQ8WZ33 124 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 RERGLQ9H628 205 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 SPANXCQ9NY87 97 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 COPZ2Q9P299 210 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 FRYQ5TBA9 3013 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 EHBP1L1Q8N3D4 1523 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 SETBP1Q9Y6X0 1596 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 RANBP2P49792 3224 aaKnown RBP-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 CUL7Q14999 1698 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 KIAA1551Q9HCM1 1747 aa-0.5□□□□□ -2.49
FOXN3-216ENST00000557496 BPTFQ12830 3046 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 A0A087WVE0 104 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 MIF4GDA9UHW6 222 aaKnown RBP-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 CHD1O14646 1710 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 COX8AP10176 69 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 ARPC4P59998 168 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 TOP2BQ02880 1626 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 CATR1Q13166 79 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 COMMD6Q7Z4G1 85 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 C5orf38Q86SI9 138 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 SMG6Q86US8 1419 aaKnown RBP-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 WFDC13Q8IUB5 93 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 PYDC1Q8WXC3 89 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 TCEAL4Q96EI5 215 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 USMG5Q96IX5 58 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 FAM167A-AS1Q96KT0 104 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 KIF20BQ96Q89 1820 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 CICQ96RK0 1608 aaPredicted RBP-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 MRPL34Q9BQ48 92 aaKnown RBP-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 SNRNP25Q9BV90 132 aaKnown RBP-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 LINC00470Q9BZP3 86 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 DPH3P1Q9H4G8 78 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 SPANXA1Q9NS26 97 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 CCDC167Q9P0B6 97 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 SCN11AQ9UI33 1791 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 NCOA3Q9Y6Q9 1424 aa-0.51□□□□□ -2.49
FOXN3-216ENST00000557496 DNAH17Q9UFH2 4485 aa-0.52□□□□□ -2.49
FOXN3-216ENST00000557496 BCORQ6W2J9 1755 aa-0.52□□□□□ -2.49
FOXN3-216ENST00000557496 MON2Q7Z3U7 1717 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms