RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 PLAC8L1A1L4L8 177 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 UNC80Q8N2C7 3258 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 ESRGQ1W209 222 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 H0Y9P7 68 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 PCNX2A6NKB5 2137 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 PCOTHQ58A44 107 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 LINC00208Q96KT6 92 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 MALRD1Q5VYJ5 2156 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 ARHGAP32A7KAX9 2087 aa3.41□□□□□ -1.86
SYNE2-223ENST00000557005 EGFEM1PQ0D2K5 195 aa3.4□□□□□ -1.86
SYNE2-223ENST00000557005 MYO15AQ9UKN7 3530 aa3.4□□□□□ -1.86
SYNE2-223ENST00000557005 CEP350Q5VT06 3117 aa3.4□□□□□ -1.87
SYNE2-223ENST00000557005 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
SYNE2-223ENST00000557005 CYSTM1Q9H1C7 97 aa3.4□□□□□ -1.87
SYNE2-223ENST00000557005 WDFY3Q8IZQ1 3526 aa3.4□□□□□ -1.87
SYNE2-223ENST00000557005 Q9BRP9 147 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 USF3Q68DE3 2245 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 ST20-AS1Q8NBB2 130 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 RPL37AP61513 92 aaKnown RBP3.39□□□□□ -1.87
SYNE2-223ENST00000557005 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 M0R2N4 97 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 Q6ZTC4 211 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 CACNA1EQ15878 2313 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 SVILO95425 2214 aa3.39□□□□□ -1.87
SYNE2-223ENST00000557005 SEC61GP60059 68 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 PLXNB1O43157 2135 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 IGHV6-1A0A0B4J1U7 121 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 FAM168BA1KXE4 195 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 PRLHP81277 87 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 X6R8D5 127 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 C7orf33Q8WU49 177 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 LAMA3Q16787 3333 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 IGLV6-57P01721 117 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 LINC00167Q96N53 147 aa3.38□□□□□ -1.87
SYNE2-223ENST00000557005 URB1O60287 2271 aaKnown RBP3.37□□□□□ -1.87
SYNE2-223ENST00000557005 A0A087WSZ3 146 aa3.37□□□□□ -1.87
SYNE2-223ENST00000557005 C22orf24Q9Y442 160 aa3.37□□□□□ -1.87
SYNE2-223ENST00000557005 NAV3Q8IVL0 2385 aa3.37□□□□□ -1.87
SYNE2-223ENST00000557005 OXLD1Q5BKU9 147 aa3.37□□□□□ -1.87
SYNE2-223ENST00000557005 SPINK6Q6UWN8 80 aa3.37□□□□□ -1.87
SYNE2-223ENST00000557005 LINC00336Q6ZUF6 198 aa3.37□□□□□ -1.87
SYNE2-223ENST00000557005 ATRXP46100 2492 aa3.37□□□□□ -1.87
SYNE2-223ENST00000557005 BCE1O60756 84 aa3.36□□□□□ -1.87
SYNE2-223ENST00000557005 FSHBP01225 129 aa3.36□□□□□ -1.87
SYNE2-223ENST00000557005 ICE1Q9Y2F5 2266 aa3.36□□□□□ -1.87
SYNE2-223ENST00000557005 OBSCN-AS1Q96MR7 158 aa3.36□□□□□ -1.87
SYNE2-223ENST00000557005 Q5XG85 94 aa3.36□□□□□ -1.87
SYNE2-223ENST00000557005 H7BZZ5 65 aa3.36□□□□□ -1.87
SYNE2-223ENST00000557005 LINC01600Q96MT4 127 aa3.36□□□□□ -1.87
SYNE2-223ENST00000557005 CSNK1G2-AS1Q8NCQ2 148 aa3.35□□□□□ -1.87
SYNE2-223ENST00000557005 K7EQZ3 153 aa3.35□□□□□ -1.87
SYNE2-223ENST00000557005 C14orf177Q52M58 125 aa3.35□□□□□ -1.87
SYNE2-223ENST00000557005 SERTAD4-AS1Q5TG53 156 aa3.35□□□□□ -1.87
SYNE2-223ENST00000557005 C1orf64Q8NEQ6 169 aa3.35□□□□□ -1.87
SYNE2-223ENST00000557005 Q6ZRP5 223 aa3.35□□□□□ -1.87
SYNE2-223ENST00000557005 FAM229BQ4G0N7 80 aa3.34□□□□□ -1.87
SYNE2-223ENST00000557005 A0A0G2JQZ4 141 aa3.34□□□□□ -1.87
SYNE2-223ENST00000557005 A0A1W2PNN7 141 aa3.34□□□□□ -1.87
SYNE2-223ENST00000557005 GIG44P09565 113 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-223ENST00000557005 LINC00476Q8WZB0 136 aa3.34□□□□□ -1.88
SYNE2-223ENST00000557005 TNCP24821 2201 aa3.34□□□□□ -1.88
SYNE2-223ENST00000557005 DMDP11532 3685 aa3.33□□□□□ -1.88
SYNE2-223ENST00000557005 KRTAP10-3P60369 221 aa3.33□□□□□ -1.88
SYNE2-223ENST00000557005 Q6ZRX8 168 aa3.33□□□□□ -1.88
SYNE2-223ENST00000557005 hDV103S1A0JD37 113 aa3.33□□□□□ -1.88
SYNE2-223ENST00000557005 F8WDY8 70 aa3.33□□□□□ -1.88
SYNE2-223ENST00000557005 VPREB1P12018 145 aa3.33□□□□□ -1.88
SYNE2-223ENST00000557005 AGRNO00468 2067 aa3.33□□□□□ -1.88
SYNE2-223ENST00000557005 SPAG11AQ6PDA7 123 aa3.32□□□□□ -1.88
SYNE2-223ENST00000557005 CHD7Q9P2D1 2997 aa3.32□□□□□ -1.88
SYNE2-223ENST00000557005 RANBP2P49792 3224 aaKnown RBP3.32□□□□□ -1.88
SYNE2-223ENST00000557005 PRRC2AP48634 2157 aaKnown RBP3.32□□□□□ -1.88
SYNE2-223ENST00000557005 OXTP01178 125 aa3.32□□□□□ -1.88
SYNE2-223ENST00000557005 MUC4Q99102 2169 aa3.32□□□□□ -1.88
SYNE2-223ENST00000557005 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-223ENST00000557005 CIRBP-AS1Q8TBR5 109 aa3.32□□□□□ -1.88
SYNE2-223ENST00000557005 KLKP1Q107X0 134 aa3.31□□□□□ -1.88
SYNE2-223ENST00000557005 PHF5AQ7RTV0 110 aaKnown RBP3.31□□□□□ -1.88
SYNE2-223ENST00000557005 Q8NAQ8 132 aa3.31□□□□□ -1.88
SYNE2-223ENST00000557005 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
SYNE2-223ENST00000557005 GVQW2A0A096LPI5 108 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-223ENST00000557005 A8MUN3 132 aa3.31□□□□□ -1.88
SYNE2-223ENST00000557005 ERC2-IT1O76042 136 aa3.31□□□□□ -1.88
SYNE2-223ENST00000557005 C15orf56Q8N910 161 aa3.31□□□□□ -1.88
SYNE2-223ENST00000557005 BRWD1Q9NSI6 2320 aa3.3□□□□□ -1.88
SYNE2-223ENST00000557005 LINC01556Q5JQF7 62 aa3.3□□□□□ -1.88
SYNE2-223ENST00000557005 LIMD2Q9BT23 127 aa3.3□□□□□ -1.88
SYNE2-223ENST00000557005 CADP27708 2225 aa3.3□□□□□ -1.88
SYNE2-223ENST00000557005 A0A0C4DFX4 3053 aa3.3□□□□□ -1.88
SYNE2-223ENST00000557005 CHTF8P0CG12 524 aa3.3□□□□□ -1.88
SYNE2-223ENST00000557005 TRBV7-4A0A0J9YYF1 115 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 Q8NBF4 154 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 IGLV1-50A0A075B6I6 118 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 A0A096LNT2 108 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 Q8NDZ9 215 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 COA5Q86WW8 74 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 LINC00528Q8N1L1 170 aa3.29□□□□□ -1.88
SYNE2-223ENST00000557005 Q8N377 158 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms