RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 BUB1B-PAK6H3BSN5 160 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 DEFB133Q30KQ1 61 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 FAM229BQ4G0N7 80 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 BRD3OSQ6XYD6 125 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 ATP11AUNQ6ZP68 121 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 GPHB5Q86YW7 130 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 RPL39LQ96EH5 51 aaKnown RBP2.18□□□□□ -2.06
PRPF39-210ENST00000556718 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 C14orf132Q9NPU4 83 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 LINC00474Q9P2X8 69 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 TNRC6BQ9UPQ9 1833 aaKnown RBP2.17□□□□□ -2.06
PRPF39-210ENST00000556718 E7EUB6 86 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 K7EIM0 57 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 NDUFB1O75438 58 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 HAMPP81172 84 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 SS18Q15532 418 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 C10orf55Q5SWW7 151 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
PRPF39-210ENST00000556718 CNEP1R1Q8N9A8 125 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 TMEM254Q8TBM7 123 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 RNASE6Q93091 150 aaKnown RBP2.17□□□□□ -2.06
PRPF39-210ENST00000556718 GAFA1Q96PS6 74 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 CYP4F30PQ9H0H9 118 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 MUC22E2RYF6 1773 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-210ENST00000556718 ALPK2Q86TB3 2170 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 CEP192Q8TEP8 1941 aa2.17□□□□□ -2.06
PRPF39-210ENST00000556718 C5orf67F2Z3F1 127 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 M0R378 163 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 RPL39P62891 51 aaKnown RBP2.16□□□□□ -2.06
PRPF39-210ENST00000556718 NREPQ16612 68 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 MYO7BQ6PIF6 2116 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 Q6ZS52 159 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 Q8N6K4 173 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 DEFB108BQ8NET1 73 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 HEATR1Q9H583 2144 aaKnown RBP2.16□□□□□ -2.06
PRPF39-210ENST00000556718 SNURFQ9Y675 71 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 DSCAML1Q8TD84 2053 aa2.16□□□□□ -2.06
PRPF39-210ENST00000556718 TET1Q8NFU7 2136 aa2.15□□□□□ -2.06
PRPF39-210ENST00000556718 LOC110117498A0A087WWA1 95 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 NCR3O14931 201 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 ZNF73O43830 326 aaPredicted RBP2.15□□□□□ -2.07
PRPF39-210ENST00000556718 TFF1P04155 84 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 CCL4P13236 92 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 SOSTDC1Q6X4U4 206 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 LCA10Q71F78 164 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 LINC00269Q8N2A0 174 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 C20orf166-AS1Q96NR2 134 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 MINOS1-NBL1R4GNA1 71 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 SPAG17Q6Q759 2223 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 SNRNP200O75643 2136 aaKnown RBP2.15□□□□□ -2.07
PRPF39-210ENST00000556718 CACNA1DQ01668 2161 aa2.15□□□□□ -2.07
PRPF39-210ENST00000556718 EML6Q6ZMW3 1958 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 hDV103S1A0JD37 113 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 M0QY20 66 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 APELAP0DMC3 54 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 LINC00158P58513 81 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 DEFB103AP81534 67 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 Q8N2B8 174 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 ZNF625Q96I27 306 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-210ENST00000556718 PSORS1C2Q9UIG4 136 aa2.14□□□□□ -2.07
PRPF39-210ENST00000556718 TRBV6-8A0A0A6YYG3 113 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 TRBV7-4A0A0J9YYF1 115 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 C10orf142B7Z368 130 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 CHKB-CPT1BH3BT56 60 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 GNRH2O43555 120 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 ELOF1P60002 83 aaKnown RBP2.13□□□□□ -2.07
PRPF39-210ENST00000556718 FAM74A4Q5TZK3 123 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 Q8N814 137 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 SPTSSBQ8NFR3 76 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 TTTY12Q9BZ98 90 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 BPESC1Q9GZL8 116 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 KAAG1Q9UBP8 84 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 C22orf24Q9Y442 160 aa2.13□□□□□ -2.07
PRPF39-210ENST00000556718 IGLV3-9A0A075B6K5 115 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 TRAV10A0A0B4J240 114 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 TRAV22A0A0B4J277 110 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 RNASE3P12724 160 aaKnown RBP2.12□□□□□ -2.07
PRPF39-210ENST00000556718 CCL3L1P16619 93 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 KLK9Q2XQG4 91 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 ASB16-AS1Q495Z4 193 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 WFDC9Q8NEX5 89 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 COX7B2Q8TF08 81 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 DIRC1Q969H9 104 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 XAGE1AQ9HD64 81 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 CDKN2A-AS1Q9UH64 79 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 KLK9Q9UKQ9 250 aa2.12□□□□□ -2.07
PRPF39-210ENST00000556718 TRBV10-1A0A0K0K1A3 114 aa2.11□□□□□ -2.07
PRPF39-210ENST00000556718 TRBV6-4A0A1B0GX49 114 aa2.11□□□□□ -2.07
PRPF39-210ENST00000556718 IGKV2-29A2NJV5 120 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-210ENST00000556718 ODF3BA8MYP8 253 aa2.11□□□□□ -2.07
PRPF39-210ENST00000556718 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
PRPF39-210ENST00000556718 MINOS1Q5TGZ0 78 aa2.11□□□□□ -2.07
PRPF39-210ENST00000556718 Q6ZQT0 140 aa2.11□□□□□ -2.07
PRPF39-210ENST00000556718 USF3Q68DE3 2245 aa2.11□□□□□ -2.07
PRPF39-210ENST00000556718 UNC13CQ8NB66 2214 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 CLPSL1A2RUU4 121 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms