RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 HERVK_113P63121 156 aa7.26□□□□□ -1.25
SLIRP-205ENST00000556310 GAGE2BQ13066 116 aa7.26□□□□□ -1.25
SLIRP-205ENST00000556310 KIAA0087Q14695 138 aa7.26□□□□□ -1.25
SLIRP-205ENST00000556310 C18orf32Q8TCD1 76 aa7.26□□□□□ -1.25
SLIRP-205ENST00000556310 YPEL4Q96NS1 127 aa7.26□□□□□ -1.25
SLIRP-205ENST00000556310 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
SLIRP-205ENST00000556310 RPL18AQ02543 176 aaKnown RBP7.25□□□□□ -1.25
SLIRP-205ENST00000556310 KRTAP9-2Q9BYQ4 174 aa7.25□□□□□ -1.25
SLIRP-205ENST00000556310 LRP1Q07954 4544 aaKnown RBP7.24□□□□□ -1.25
SLIRP-205ENST00000556310 A0A0J9YXV3 536 aa7.24□□□□□ -1.25
SLIRP-205ENST00000556310 C10orf25Q5T742 122 aa7.24□□□□□ -1.25
SLIRP-205ENST00000556310 UNQ6190/PRO20217Q6UXQ8 127 aa7.24□□□□□ -1.25
SLIRP-205ENST00000556310 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
SLIRP-205ENST00000556310 C6orf48Q9UBA6 75 aa7.24□□□□□ -1.25
SLIRP-205ENST00000556310 A0A096LNJ9 63 aa7.23□□□□□ -1.25
SLIRP-205ENST00000556310 TRBV30A0A0K0K1B3 111 aa7.23□□□□□ -1.25
SLIRP-205ENST00000556310 KRTAP29-1A8MX34 341 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-205ENST00000556310 TLX1NBP0CAT3 122 aa7.23□□□□□ -1.25
SLIRP-205ENST00000556310 HNRNPA3P51991 378 aaKnown RBP7.23□□□□□ -1.25
SLIRP-205ENST00000556310 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
SLIRP-205ENST00000556310 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
SLIRP-205ENST00000556310 IGLV5-45A0A087WSX0 123 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 HBDP02042 147 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 PRSS2P07478 247 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 LINC00614P0C842 121 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 PMVKQ15126 192 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 CBLN2Q8IUK8 224 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 Q8IZM0 81 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 LINC00469Q8N7U9 141 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 PACRGQ96M98 296 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-205ENST00000556310 CST9LQ9H4G1 147 aa7.22□□□□□ -1.25
SLIRP-205ENST00000556310 RAB5BP61020 215 aa7.21□□□□□ -1.26
SLIRP-205ENST00000556310 PRR3P79522 188 aaKnown RBP7.21□□□□□ -1.26
SLIRP-205ENST00000556310 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-205ENST00000556310 C2orf82Q6UX34 121 aa7.21□□□□□ -1.26
SLIRP-205ENST00000556310 Q6ZRP5 223 aa7.21□□□□□ -1.26
SLIRP-205ENST00000556310 TOMM7Q9P0U1 55 aa7.21□□□□□ -1.26
SLIRP-205ENST00000556310 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
SLIRP-205ENST00000556310 A0A1W2PNN7 141 aa7.2□□□□□ -1.26
SLIRP-205ENST00000556310 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-205ENST00000556310 SMIM1B2RUZ4 78 aa7.2□□□□□ -1.26
SLIRP-205ENST00000556310 CKS1BP61024 79 aa7.2□□□□□ -1.26
SLIRP-205ENST00000556310 SLC7A5P1Q8MH63 180 aa7.2□□□□□ -1.26
SLIRP-205ENST00000556310 NDUFC2-KCTD14E9PQ53 114 aa7.19□□□□□ -1.26
SLIRP-205ENST00000556310 OXTP01178 125 aa7.19□□□□□ -1.26
SLIRP-205ENST00000556310 CXCL5P42830 114 aa7.19□□□□□ -1.26
SLIRP-205ENST00000556310 PMCHL1Q16048 86 aa7.19□□□□□ -1.26
SLIRP-205ENST00000556310 PDZD11Q5EBL8 140 aa7.19□□□□□ -1.26
SLIRP-205ENST00000556310 C6orf226Q5I0X4 101 aa7.19□□□□□ -1.26
SLIRP-205ENST00000556310 ATP5LO75964 103 aa7.18□□□□□ -1.26
SLIRP-205ENST00000556310 F8VRH5 84 aa7.17□□□□□ -1.26
SLIRP-205ENST00000556310 IGLC3P0DOY3 106 aa7.17□□□□□ -1.26
SLIRP-205ENST00000556310 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
SLIRP-205ENST00000556310 CHCHD1Q96BP2 118 aaKnown RBP7.17□□□□□ -1.26
SLIRP-205ENST00000556310 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
SLIRP-205ENST00000556310 H3BRM9 83 aa7.16□□□□□ -1.26
SLIRP-205ENST00000556310 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
SLIRP-205ENST00000556310 COX7B2Q8TF08 81 aa7.16□□□□□ -1.26
SLIRP-205ENST00000556310 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
SLIRP-205ENST00000556310 NDUFA6P56556 154 aa7.15□□□□□ -1.26
SLIRP-205ENST00000556310 FAM19A5Q7Z5A7 132 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-205ENST00000556310 TRGC2P03986 189 aa7.14□□□□□ -1.27
SLIRP-205ENST00000556310 ZNF22P17026 224 aaPredicted RBP7.14□□□□□ -1.27
SLIRP-205ENST00000556310 C9orf129Q5T035 196 aaKnown RBP7.14□□□□□ -1.27
SLIRP-205ENST00000556310 PHF5AQ7RTV0 110 aaKnown RBP7.14□□□□□ -1.27
SLIRP-205ENST00000556310 IGLV5-39A0A0G2JS06 123 aa7.13□□□□□ -1.27
SLIRP-205ENST00000556310 M0QXV9 152 aa7.13□□□□□ -1.27
SLIRP-205ENST00000556310 BAGE3Q86Y29 109 aa7.13□□□□□ -1.27
SLIRP-205ENST00000556310 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
SLIRP-205ENST00000556310 C11orf86A6NJI1 115 aa7.12□□□□□ -1.27
SLIRP-205ENST00000556310 HSBP1O75506 76 aa7.12□□□□□ -1.27
SLIRP-205ENST00000556310 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
SLIRP-205ENST00000556310 KRTAP7-1Q8IUC3 87 aa7.12□□□□□ -1.27
SLIRP-205ENST00000556310 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
SLIRP-205ENST00000556310 TRAV12-1A0A0B4J245 112 aa7.11□□□□□ -1.27
SLIRP-205ENST00000556310 COLCA2A8K830 154 aa7.11□□□□□ -1.27
SLIRP-205ENST00000556310 B5MCH6 92 aa7.11□□□□□ -1.27
SLIRP-205ENST00000556310 SPINK6Q6UWN8 80 aa7.11□□□□□ -1.27
SLIRP-205ENST00000556310 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
SLIRP-205ENST00000556310 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
SLIRP-205ENST00000556310 SERF1AO75920 110 aa7.09□□□□□ -1.27
SLIRP-205ENST00000556310 MT1HL1P0DM35 61 aa7.09□□□□□ -1.27
SLIRP-205ENST00000556310 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
SLIRP-205ENST00000556310 C1orf137Q5JT78 98 aa7.09□□□□□ -1.27
SLIRP-205ENST00000556310 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
SLIRP-205ENST00000556310 SERTAD4-AS1Q5TG53 156 aa7.09□□□□□ -1.27
SLIRP-205ENST00000556310 FAM19A2Q8N3H0 131 aa7.09□□□□□ -1.27
SLIRP-205ENST00000556310 TNXBP22105 4242 aa7.09□□□□□ -1.27
SLIRP-205ENST00000556310 UBE2BP63146 152 aa7.08□□□□□ -1.28
SLIRP-205ENST00000556310 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
SLIRP-205ENST00000556310 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
SLIRP-205ENST00000556310 KRTAP11-1Q8IUC1 163 aa7.08□□□□□ -1.28
SLIRP-205ENST00000556310 TP73-AS1Q9UF72 201 aa7.07□□□□□ -1.28
SLIRP-205ENST00000556310 LEPROTL1O95214 131 aa7.06□□□□□ -1.28
SLIRP-205ENST00000556310 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
SLIRP-205ENST00000556310 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
SLIRP-205ENST00000556310 C22orf24Q9Y442 160 aa7.06□□□□□ -1.28
SLIRP-205ENST00000556310 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
SLIRP-205ENST00000556310 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms