RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KIF25-AS1Q9Y6Z4 181 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
PSEN1-216ENST00000556066 TRAV26-2A0A0B4J265 109 aa4.34□□□□□ -1.71
PSEN1-216ENST00000556066 M0QY20 66 aa4.34□□□□□ -1.71
PSEN1-216ENST00000556066 PRSS1P07477 247 aa4.34□□□□□ -1.71
PSEN1-216ENST00000556066 NRACQ8N912 160 aa4.34□□□□□ -1.71
PSEN1-216ENST00000556066 MAP1LC3AQ9H492 121 aa4.34□□□□□ -1.71
PSEN1-216ENST00000556066 DNAH8Q96JB1 4490 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 REG3AQ06141 175 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 FOXI1Q12951 378 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 Q8N8P6 123 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 PRR26Q8N8Z3 221 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 MIEN1Q9BRT3 115 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 TMEM243Q9BU79 118 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 PRR34Q9NV39 138 aa4.33□□□□□ -1.72
PSEN1-216ENST00000556066 hDV102S1A0JD36 115 aa4.32□□□□□ -1.72
PSEN1-216ENST00000556066 LINC01546A6NGU7 62 aa4.32□□□□□ -1.72
PSEN1-216ENST00000556066 KRTAP29-1A8MX34 341 aaPredicted RBP4.32□□□□□ -1.72
PSEN1-216ENST00000556066 UBE2L6O14933 153 aa4.32□□□□□ -1.72
PSEN1-216ENST00000556066 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
PSEN1-216ENST00000556066 DPH3P1Q9H4G8 78 aa4.32□□□□□ -1.72
PSEN1-216ENST00000556066 HSPB8Q9UJY1 196 aa4.32□□□□□ -1.72
PSEN1-216ENST00000556066 LAMTOR2Q9Y2Q5 125 aa4.32□□□□□ -1.72
PSEN1-216ENST00000556066 IGLV4-60A0A075B6I1 120 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 TCAPO15273 167 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 HBDP02042 147 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 IGLC3P0DOY3 106 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 FCER1GP30273 86 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 RPL37AP61513 92 aaKnown RBP4.31□□□□□ -1.72
PSEN1-216ENST00000556066 LINC01545Q5VT33 79 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 KRTAP26-1Q6PEX3 210 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 C9orf163Q8N9P6 203 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 C20orf203Q8NBC4 194 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
PSEN1-216ENST00000556066 DPH3Q96FX2 82 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 MRAP2Q96G30 205 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
PSEN1-216ENST00000556066 TRAV8-4A0A0B4J246 113 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 A0A1B0GUV1 79 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 A0A1B0GV90 55 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 C20orf202A1L168 122 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 PANO1I0J062 215 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 KRTAP10-4P60372 401 aaPredicted RBP4.3□□□□□ -1.72
PSEN1-216ENST00000556066 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
PSEN1-216ENST00000556066 IFI27L1Q96BM0 104 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 NXT2Q9NPJ8 142 aaKnown RBP4.3□□□□□ -1.72
PSEN1-216ENST00000556066 UQCR10Q9UDW1 63 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 TP73-AS1Q9UF72 201 aa4.3□□□□□ -1.72
PSEN1-216ENST00000556066 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.29□□□□□ -1.72
PSEN1-216ENST00000556066 M0R143 59 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 AMMECR1LQ6DCA0 310 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 Q6ZN92 141 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 SDIM1Q6ZPB5 146 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 C2orf88Q9BSF0 95 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 SMIM2Q9BVW6 85 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 SPANXA1Q9NS26 97 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
PSEN1-216ENST00000556066 IGHV3-64A0A075B6Q5 118 aa4.28□□□□□ -1.72
PSEN1-216ENST00000556066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
PSEN1-216ENST00000556066 IGKV2-29A2NJV5 120 aaPredicted RBP4.28□□□□□ -1.72
PSEN1-216ENST00000556066 OXTP01178 125 aa4.28□□□□□ -1.72
PSEN1-216ENST00000556066 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
PSEN1-216ENST00000556066 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
PSEN1-216ENST00000556066 CNBPP62633 177 aaKnown RBP4.28□□□□□ -1.72
PSEN1-216ENST00000556066 BATFQ16520 125 aa4.28□□□□□ -1.72
PSEN1-216ENST00000556066 C20orf78Q9BR46 151 aa4.28□□□□□ -1.72
PSEN1-216ENST00000556066 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 SDHAF1A6NFY7 115 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 CD164Q04900 197 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 FAM19A1Q7Z5A9 133 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 LINC01561Q8N1V8 128 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 STPG4Q8N801 248 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 ST20Q9HBF5 79 aa4.27□□□□□ -1.73
PSEN1-216ENST00000556066 A0A087WYN8 130 aa4.26□□□□□ -1.73
PSEN1-216ENST00000556066 FGF6P10767 208 aa4.26□□□□□ -1.73
PSEN1-216ENST00000556066 HINT1P49773 126 aaPredicted RBP4.26□□□□□ -1.73
PSEN1-216ENST00000556066 POLR2KP53803 58 aaKnown RBP4.26□□□□□ -1.73
PSEN1-216ENST00000556066 COX6A2Q02221 97 aa4.26□□□□□ -1.73
PSEN1-216ENST00000556066 FAM19A5Q7Z5A7 132 aaPredicted RBP4.26□□□□□ -1.73
PSEN1-216ENST00000556066 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
PSEN1-216ENST00000556066 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
PSEN1-216ENST00000556066 IGKV2-24A0A0C4DH68 120 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 H7C423 109 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 I3L3M4 83 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 PPP1R17O96001 155 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 COX8AP10176 69 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 XCL1P47992 114 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 RPL32P62910 135 aaKnown RBP4.25□□□□□ -1.73
PSEN1-216ENST00000556066 CIRBPQ14011 172 aaKnown RBP4.25□□□□□ -1.73
PSEN1-216ENST00000556066 ORMDL2Q53FV1 153 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 SLC25A34Q6PIV7 304 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 TOMM6Q96B49 74 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 TMEM101Q96IK0 257 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 SCGB3A1Q96QR1 104 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 PKHD1L1Q86WI1 4243 aa4.25□□□□□ -1.73
PSEN1-216ENST00000556066 LRP2P98164 4655 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms